RNA–Protein interactions for RNA: ENST00000576353.5

SNF8-217, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

TSL 5

Gene SNF8, Length 700 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-217ENST00000576353 Q9N2K0 584 aa18.76■□□□□ 0.59
SNF8-217ENST00000576353 DAPK2Q9UIK4 370 aa18.76■□□□□ 0.59
SNF8-217ENST00000576353 MOB4Q9Y3A3 225 aa18.76■□□□□ 0.59
SNF8-217ENST00000576353 RAB27BO00194 218 aa18.75■□□□□ 0.59
SNF8-217ENST00000576353 LANCL1O43813 399 aa18.75■□□□□ 0.59
SNF8-217ENST00000576353 IGKV1D-33P01593 117 aa18.75■□□□□ 0.59
SNF8-217ENST00000576353 IGKV1-33P01594 117 aa18.75■□□□□ 0.59
SNF8-217ENST00000576353 CD1BP29016 333 aa18.75■□□□□ 0.59
SNF8-217ENST00000576353 VDAC2P45880 294 aaPredicted RBP18.75■□□□□ 0.59
SNF8-217ENST00000576353 EBI3Q14213 229 aa18.75■□□□□ 0.59
SNF8-217ENST00000576353 MOGAT2Q3SYC2 334 aa18.75■□□□□ 0.59
SNF8-217ENST00000576353 FBLN7Q53RD9 439 aa18.75■□□□□ 0.59
SNF8-217ENST00000576353 SFXN4Q6P4A7 337 aa18.75■□□□□ 0.59
SNF8-217ENST00000576353 Q6ZS46 218 aa18.75■□□□□ 0.59
SNF8-217ENST00000576353 OR2AK2Q8NG84 335 aa18.75■□□□□ 0.59
SNF8-217ENST00000576353 ATG5Q9H1Y0 275 aa18.75■□□□□ 0.59
SNF8-217ENST00000576353 KCNK7Q9Y2U2 307 aa18.75■□□□□ 0.59
SNF8-217ENST00000576353 SERPINE3A8MV23 424 aa18.74■□□□□ 0.59
SNF8-217ENST00000576353 HLA-DRB3P79483 266 aa18.74■□□□□ 0.59
SNF8-217ENST00000576353 MXD1Q05195 221 aa18.74■□□□□ 0.59
SNF8-217ENST00000576353 HNF4GQ14541 408 aa18.74■□□□□ 0.59
SNF8-217ENST00000576353 ARL6IP1Q15041 203 aa18.74■□□□□ 0.59
SNF8-217ENST00000576353 ABCA11PQ4W5N1 156 aa18.74■□□□□ 0.59
SNF8-217ENST00000576353 IZUMO1Q8IYV9 350 aa18.74■□□□□ 0.59
SNF8-217ENST00000576353 CENPOQ9BU64 300 aa18.74■□□□□ 0.59
SNF8-217ENST00000576353 RNF167Q9H6Y7 350 aa18.74■□□□□ 0.59
SNF8-217ENST00000576353 HIST1H1DP16402 221 aaKnown RBP18.73■□□□□ 0.59
SNF8-217ENST00000576353 ZBTB25P24278 435 aa18.73■□□□□ 0.59
SNF8-217ENST00000576353 OR2T10Q8NGZ9 312 aa18.73■□□□□ 0.59
SNF8-217ENST00000576353 WNT10AQ9GZT5 417 aa18.73■□□□□ 0.59
SNF8-217ENST00000576353 A0A075B6Q4 140 aa18.72■□□□□ 0.59
SNF8-217ENST00000576353 IGHV3-72A0A0B4J1Y9 119 aa18.72■□□□□ 0.59
SNF8-217ENST00000576353 TRDCB7Z8K6 153 aa18.72■□□□□ 0.59
SNF8-217ENST00000576353 MFNGO00587 321 aa18.72■□□□□ 0.59
SNF8-217ENST00000576353 HSPA12AO43301 675 aa18.72■□□□□ 0.59
SNF8-217ENST00000576353 SCGNO76038 276 aa18.72■□□□□ 0.59
SNF8-217ENST00000576353 AMY1AP04745 511 aa18.72■□□□□ 0.59
SNF8-217ENST00000576353 AMY2AP04746 511 aa18.72■□□□□ 0.59
SNF8-217ENST00000576353 GNB3P16520 340 aa18.72■□□□□ 0.59
SNF8-217ENST00000576353 EAF1Q96JC9 268 aaPredicted RBP18.72■□□□□ 0.59
SNF8-217ENST00000576353 SLC23A1Q9UHI7 598 aa18.72■□□□□ 0.59
SNF8-217ENST00000576353 TRIM64CA6NLI5 447 aa18.71■□□□□ 0.59
SNF8-217ENST00000576353 FGF16O43320 207 aa18.71■□□□□ 0.59
SNF8-217ENST00000576353 AIREO43918 545 aa18.71■□□□□ 0.59
SNF8-217ENST00000576353 SCTP09683 121 aa18.71■□□□□ 0.59
SNF8-217ENST00000576353 CLEC2LP0C7M8 214 aa18.71■□□□□ 0.59
SNF8-217ENST00000576353 SNRPBP14678 240 aaKnown RBP18.71■□□□□ 0.59
SNF8-217ENST00000576353 CEACAM6P40199 344 aa18.71■□□□□ 0.59
SNF8-217ENST00000576353 SCAND1P57086 179 aa18.71■□□□□ 0.59
SNF8-217ENST00000576353 TREML4Q6UXN2 200 aa18.71■□□□□ 0.59
SNF8-217ENST00000576353 YIPF6Q96EC8 236 aa18.71■□□□□ 0.59
SNF8-217ENST00000576353 GHITMQ9H3K2 345 aa18.71■□□□□ 0.59
SNF8-217ENST00000576353 ITGB1BP1O14713 200 aa18.7■□□□□ 0.58
SNF8-217ENST00000576353 TMEM127O75204 238 aa18.7■□□□□ 0.58
SNF8-217ENST00000576353 MOSP00540 346 aa18.7■□□□□ 0.58
SNF8-217ENST00000576353 TALDO1P37837 337 aa18.7■□□□□ 0.58
SNF8-217ENST00000576353 ARFRP1Q13795 201 aa18.7■□□□□ 0.58
SNF8-217ENST00000576353 KIR2DS1Q14954 304 aa18.7■□□□□ 0.58
SNF8-217ENST00000576353 C9orf152Q5JTZ5 239 aa18.7■□□□□ 0.58
SNF8-217ENST00000576353 ODF3L1Q8IXM7 274 aa18.7■□□□□ 0.58
SNF8-217ENST00000576353 OR4A4PQ8NGN8 299 aa18.7■□□□□ 0.58
SNF8-217ENST00000576353 EDARADDQ8WWZ3 215 aa18.7■□□□□ 0.58
SNF8-217ENST00000576353 PIPOXQ9P0Z9 390 aa18.7■□□□□ 0.58
SNF8-217ENST00000576353 RAB29O14966 203 aa18.69■□□□□ 0.58
SNF8-217ENST00000576353 FCGR3AP08637 254 aa18.69■□□□□ 0.58
SNF8-217ENST00000576353 C2orf68Q2NKX9 166 aa18.69■□□□□ 0.58
SNF8-217ENST00000576353 TMEM95Q3KNT9 176 aa18.69■□□□□ 0.58
SNF8-217ENST00000576353 IDNKQ5T6J7 187 aa18.69■□□□□ 0.58
SNF8-217ENST00000576353 Q8N6K4 173 aa18.69■□□□□ 0.58
SNF8-217ENST00000576353 C5orf56Q8N8D9 126 aa18.69■□□□□ 0.58
SNF8-217ENST00000576353 C11orf44Q8N8P7 122 aa18.69■□□□□ 0.58
SNF8-217ENST00000576353 OR8H1Q8NGG4 311 aa18.69■□□□□ 0.58
SNF8-217ENST00000576353 LGALS14Q8TCE9 139 aa18.69■□□□□ 0.58
SNF8-217ENST00000576353 IFI27L2Q9H2X8 130 aa18.69■□□□□ 0.58
SNF8-217ENST00000576353 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP18.69■□□□□ 0.58
SNF8-217ENST00000576353 ETV7Q9Y603 341 aa18.69■□□□□ 0.58
SNF8-217ENST00000576353 SH2D7A6NKC9 451 aaPredicted RBP18.68■□□□□ 0.58
SNF8-217ENST00000576353 NCBP2LA6PVI3 153 aaKnown RBP18.68■□□□□ 0.58
SNF8-217ENST00000576353 ZNF736B4DX44 427 aaPredicted RBP18.68■□□□□ 0.58
SNF8-217ENST00000576353 ST8SIA5O15466 376 aa18.68■□□□□ 0.58
SNF8-217ENST00000576353 FBXO24O75426 580 aa18.68■□□□□ 0.58
SNF8-217ENST00000576353 SERPINB10P48595 397 aa18.68■□□□□ 0.58
SNF8-217ENST00000576353 LSAMPQ13449 338 aa18.68■□□□□ 0.58
SNF8-217ENST00000576353 CDNFQ49AH0 187 aa18.68■□□□□ 0.58
SNF8-217ENST00000576353 FAM71F2Q6NXP2 309 aa18.68■□□□□ 0.58
SNF8-217ENST00000576353 ZNF833PQ6ZTB9 187 aa18.68■□□□□ 0.58
SNF8-217ENST00000576353 CENPVQ7Z7K6 275 aaPredicted RBP18.68■□□□□ 0.58
SNF8-217ENST00000576353 CROCCP3Q8IVE0 287 aa18.68■□□□□ 0.58
SNF8-217ENST00000576353 WIPF2Q8TF74 440 aaPredicted RBP18.68■□□□□ 0.58
SNF8-217ENST00000576353 S1PR3Q99500 378 aa18.68■□□□□ 0.58
SNF8-217ENST00000576353 OR1A1Q9P1Q5 309 aa18.68■□□□□ 0.58
SNF8-217ENST00000576353 SAA2-SAA4A0A096LPE2 208 aa18.67■□□□□ 0.58
SNF8-217ENST00000576353 FABP7O15540 132 aa18.67■□□□□ 0.58
SNF8-217ENST00000576353 SAA2P0DJI9 122 aaPredicted RBP18.67■□□□□ 0.58
SNF8-217ENST00000576353 OR3A3P47888 321 aa18.67■□□□□ 0.58
SNF8-217ENST00000576353 SRSF7Q16629 238 aaKnown RBP eCLIP18.67■□□□□ 0.58
SNF8-217ENST00000576353 PHF21AQ96BD5 680 aa18.67■□□□□ 0.58
SNF8-217ENST00000576353 C11orf54Q9H0W9 315 aaPredicted RBP18.67■□□□□ 0.58
SNF8-217ENST00000576353 RHBDL2Q9NX52 303 aa18.67■□□□□ 0.58
SNF8-217ENST00000576353 NBEAL1Q6ZS30 2694 aa18.67■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms