RNA–Protein interactions for RNA: ENST00000574855.1

NUP88-209, Transcript of nucleoporin 88, humanhuman

TSL 2

Gene NUP88, Length 434 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP88-209ENST00000574855 PSG8Q9UQ74 426 aa2.58□□□□□ -2
NUP88-209ENST00000574855 VSIG4Q9Y279 399 aa2.58□□□□□ -2
NUP88-209ENST00000574855 Q9Y3F1 56 aa2.58□□□□□ -2
NUP88-209ENST00000574855 TNS1Q9HBL0 1735 aaKnown RBP2.58□□□□□ -2
NUP88-209ENST00000574855 PTPRJQ12913 1337 aa2.58□□□□□ -2
NUP88-209ENST00000574855 KIF13BQ9NQT8 1826 aa2.57□□□□□ -2
NUP88-209ENST00000574855 IGHV3OR16-12A0A075B7B8 117 aa2.57□□□□□ -2
NUP88-209ENST00000574855 IQCMA0A1B0GVH7 501 aa2.57□□□□□ -2
NUP88-209ENST00000574855 C12orf77C9JDV5 145 aa2.57□□□□□ -2
NUP88-209ENST00000574855 H7C417 338 aa2.57□□□□□ -2
NUP88-209ENST00000574855 I3L4J1 428 aa2.57□□□□□ -2
NUP88-209ENST00000574855 K7EQD1 137 aa2.57□□□□□ -2
NUP88-209ENST00000574855 MFSD11O43934 449 aa2.57□□□□□ -2
NUP88-209ENST00000574855 REM1O75628 298 aa2.57□□□□□ -2
NUP88-209ENST00000574855 UPK1BO75841 260 aa2.57□□□□□ -2
NUP88-209ENST00000574855 SULT1C4O75897 302 aa2.57□□□□□ -2
NUP88-209ENST00000574855 NXPH4O95158 308 aa2.57□□□□□ -2
NUP88-209ENST00000574855 PDYNP01213 254 aa2.57□□□□□ -2
NUP88-209ENST00000574855 PFN1P07737 140 aaKnown RBP2.57□□□□□ -2
NUP88-209ENST00000574855 BPGMP07738 259 aa2.57□□□□□ -2
NUP88-209ENST00000574855 HTR1AP08908 422 aa2.57□□□□□ -2
NUP88-209ENST00000574855 FBP1P09467 338 aa2.57□□□□□ -2
NUP88-209ENST00000574855 OR56A5P0C7T3 313 aa2.57□□□□□ -2
NUP88-209ENST00000574855 SULT1A3P0DMM9 295 aa2.57□□□□□ -2
NUP88-209ENST00000574855 SULT1A4P0DMN0 295 aa2.57□□□□□ -2
NUP88-209ENST00000574855 CD79AP11912 226 aa2.57□□□□□ -2
NUP88-209ENST00000574855 CD1EP15812 388 aa2.57□□□□□ -2
NUP88-209ENST00000574855 ATF1P18846 271 aa2.57□□□□□ -2
NUP88-209ENST00000574855 CXCL2P19875 107 aa2.57□□□□□ -2
NUP88-209ENST00000574855 TCN2P20062 427 aa2.57□□□□□ -2
NUP88-209ENST00000574855 PSMB9P28065 219 aa2.57□□□□□ -2
NUP88-209ENST00000574855 CD34P28906 385 aa2.57□□□□□ -2
NUP88-209ENST00000574855 CA5AP35218 305 aa2.57□□□□□ -2
NUP88-209ENST00000574855 RPL22P35268 128 aaKnown RBP2.57□□□□□ -2
NUP88-209ENST00000574855 GGT2P36268 569 aa2.57□□□□□ -2
NUP88-209ENST00000574855 NUDT1P36639 197 aa2.57□□□□□ -2
NUP88-209ENST00000574855 RIPPLY3P57055 190 aa2.57□□□□□ -2
NUP88-209ENST00000574855 MTPNP58546 118 aa2.57□□□□□ -2
NUP88-209ENST00000574855 DNAJB13P59910 316 aa2.57□□□□□ -2
NUP88-209ENST00000574855 TPI1P60174 286 aa2.57□□□□□ -2
NUP88-209ENST00000574855 DYNLT1P63172 113 aa2.57□□□□□ -2
NUP88-209ENST00000574855 HBG1P69891 147 aa2.57□□□□□ -2
NUP88-209ENST00000574855 HBG2P69892 147 aa2.57□□□□□ -2
NUP88-209ENST00000574855 SLC35A2P78381 396 aa2.57□□□□□ -2
NUP88-209ENST00000574855 DEFA6Q01524 100 aa2.57□□□□□ -2
NUP88-209ENST00000574855 EMX1Q04741 257 aaPredicted RBP2.57□□□□□ -2
NUP88-209ENST00000574855 LY6DQ14210 128 aa2.57□□□□□ -2
NUP88-209ENST00000574855 C14orf28Q4W4Y0 310 aa2.57□□□□□ -2
NUP88-209ENST00000574855 TTC32Q5I0X7 151 aa2.57□□□□□ -2
NUP88-209ENST00000574855 TMEM255AQ5JRV8 349 aa2.57□□□□□ -2
NUP88-209ENST00000574855 PAGE3Q5JUK9 113 aa2.57□□□□□ -2
NUP88-209ENST00000574855 MUC21Q5SSG8 566 aa2.57□□□□□ -2
NUP88-209ENST00000574855 ZNF684Q5T5D7 378 aa2.57□□□□□ -2
NUP88-209ENST00000574855 HENMT1Q5T8I9 393 aaKnown RBP2.57□□□□□ -2
NUP88-209ENST00000574855 SAMD13Q5VXD3 122 aa2.57□□□□□ -2
NUP88-209ENST00000574855 TEX36Q5VZQ5 186 aa2.57□□□□□ -2
NUP88-209ENST00000574855 FBXW9Q5XUX1 488 aa2.57□□□□□ -2
NUP88-209ENST00000574855 STEAP4Q687X5 459 aa2.57□□□□□ -2
NUP88-209ENST00000574855 ELP2Q6IA86 826 aa2.57□□□□□ -2
NUP88-209ENST00000574855 PAMR1Q6UXH9 720 aa2.57□□□□□ -2
NUP88-209ENST00000574855 ALKAL1Q6UXT8 129 aa2.57□□□□□ -2
NUP88-209ENST00000574855 SPNS3Q6ZMD2 512 aa2.57□□□□□ -2
NUP88-209ENST00000574855 STRADAQ7RTN6 431 aa2.57□□□□□ -2
NUP88-209ENST00000574855 NAA40Q86UY6 237 aa2.57□□□□□ -2
NUP88-209ENST00000574855 TMEM86AQ8N2M4 240 aa2.57□□□□□ -2
NUP88-209ENST00000574855 Q8NBF4 154 aa2.57□□□□□ -2
NUP88-209ENST00000574855 CHST4Q8NCG5 386 aa2.57□□□□□ -2
NUP88-209ENST00000574855 OR9I1Q8NGQ6 314 aa2.57□□□□□ -2
NUP88-209ENST00000574855 OR5J2Q8NH18 312 aa2.57□□□□□ -2
NUP88-209ENST00000574855 OR10D3Q8NH80 312 aa2.57□□□□□ -2
NUP88-209ENST00000574855 MFSD8Q8NHS3 518 aa2.57□□□□□ -2
NUP88-209ENST00000574855 MCFD2Q8NI22 146 aa2.57□□□□□ -2
NUP88-209ENST00000574855 JOSD2Q8TAC2 188 aa2.57□□□□□ -2
NUP88-209ENST00000574855 ZFP90Q8TF47 636 aa2.57□□□□□ -2
NUP88-209ENST00000574855 CNRIP1Q96F85 164 aaPredicted RBP2.57□□□□□ -2
NUP88-209ENST00000574855 DCUN1D1Q96GG9 259 aa2.57□□□□□ -2
NUP88-209ENST00000574855 SMARCD1Q96GM5 515 aa2.57□□□□□ -2
NUP88-209ENST00000574855 FMC1Q96HJ9 113 aa2.57□□□□□ -2
NUP88-209ENST00000574855 BTN2A3PQ96KV6 586 aa2.57□□□□□ -2
NUP88-209ENST00000574855 FOPNLQ96NB1 174 aa2.57□□□□□ -2
NUP88-209ENST00000574855 RNF157Q96PX1 679 aa2.57□□□□□ -2
NUP88-209ENST00000574855 OR52B2Q96RD2 323 aa2.57□□□□□ -2
NUP88-209ENST00000574855 SULT4A1Q9BR01 284 aa2.57□□□□□ -2
NUP88-209ENST00000574855 RIOK2Q9BVS4 552 aaKnown RBP2.57□□□□□ -2
NUP88-209ENST00000574855 CHST5Q9GZS9 411 aa2.57□□□□□ -2
NUP88-209ENST00000574855 C20orf85Q9H1P6 137 aa2.57□□□□□ -2
NUP88-209ENST00000574855 FAM96AQ9H5X1 160 aa2.57□□□□□ -2
NUP88-209ENST00000574855 ISG20L2Q9H9L3 353 aaKnown RBP2.57□□□□□ -2
NUP88-209ENST00000574855 TPT1P8Q9HAU6 139 aa2.57□□□□□ -2
NUP88-209ENST00000574855 MTFP1Q9UDX5 166 aa2.57□□□□□ -2
NUP88-209ENST00000574855 JPT1Q9UK76 154 aa2.57□□□□□ -2
NUP88-209ENST00000574855 PKIGQ9Y2B9 76 aa2.57□□□□□ -2
NUP88-209ENST00000574855 ORC6Q9Y5N6 252 aa2.57□□□□□ -2
NUP88-209ENST00000574855 KCNE3Q9Y6H6 103 aa2.57□□□□□ -2
NUP88-209ENST00000574855 V9GY05 133 aa2.57□□□□□ -2
NUP88-209ENST00000574855 CLUHO75153 1309 aa2.57□□□□□ -2
NUP88-209ENST00000574855 DOCK3Q8IZD9 2030 aa2.57□□□□□ -2
NUP88-209ENST00000574855 ZNF646O15015 1829 aaPredicted RBP2.56□□□□□ -2
NUP88-209ENST00000574855 PHIPQ8WWQ0 1821 aa2.56□□□□□ -2
NUP88-209ENST00000574855 DOCK1Q14185 1865 aa2.56□□□□□ -2
Retrieved 100 of 20,778 RNA–protein pairs in 57.7 ms