RNA–Protein interactions for RNA: ENST00000574095.1

NPLOC4-215, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 3

Gene NPLOC4, Length 277 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-215ENST00000574095 PSMA1P25786 263 aaKnown RBP20.54■□□□□ 0.88
NPLOC4-215ENST00000574095 GPR12P47775 334 aa20.54■□□□□ 0.88
NPLOC4-215ENST00000574095 HSPA13P48723 471 aa20.54■□□□□ 0.88
NPLOC4-215ENST00000574095 Q6ZPA2 131 aa20.54■□□□□ 0.88
NPLOC4-215ENST00000574095 YPEL2Q96QA6 119 aa20.54■□□□□ 0.88
NPLOC4-215ENST00000574095 LRRC42Q9Y546 428 aa20.54■□□□□ 0.88
NPLOC4-215ENST00000574095 CALRP27797 417 aaKnown RBP20.53■□□□□ 0.88
NPLOC4-215ENST00000574095 RPL23AP62750 156 aaKnown RBP20.53■□□□□ 0.88
NPLOC4-215ENST00000574095 SLC35B1P78383 322 aa20.53■□□□□ 0.88
NPLOC4-215ENST00000574095 LSAMPQ13449 338 aa20.53■□□□□ 0.88
NPLOC4-215ENST00000574095 C18orf65Q6ZTR6 163 aa20.53■□□□□ 0.88
NPLOC4-215ENST00000574095 SVOPQ8N4V2 548 aa20.53■□□□□ 0.88
NPLOC4-215ENST00000574095 IL1F10Q8WWZ1 152 aa20.53■□□□□ 0.88
NPLOC4-215ENST00000574095 RASL11BQ9BPW5 248 aa20.53■□□□□ 0.88
NPLOC4-215ENST00000574095 URM1Q9BTM9 101 aaKnown RBP20.53■□□□□ 0.88
NPLOC4-215ENST00000574095 ABRACLQ9P1F3 81 aa20.53■□□□□ 0.88
NPLOC4-215ENST00000574095 RGS11O94810 467 aa20.52■□□□□ 0.88
NPLOC4-215ENST00000574095 NAPSAO96009 420 aa20.52■□□□□ 0.88
NPLOC4-215ENST00000574095 CLDN12P56749 244 aa20.52■□□□□ 0.88
NPLOC4-215ENST00000574095 RAB11BQ15907 218 aa20.52■□□□□ 0.88
NPLOC4-215ENST00000574095 FOXB2Q5VYV0 432 aa20.52■□□□□ 0.88
NPLOC4-215ENST00000574095 OR2W3Q7Z3T1 314 aa20.52■□□□□ 0.88
NPLOC4-215ENST00000574095 OR51D1Q8NGF3 324 aa20.52■□□□□ 0.88
NPLOC4-215ENST00000574095 OR8H1Q8NGG4 311 aa20.52■□□□□ 0.88
NPLOC4-215ENST00000574095 NECAP2Q9NVZ3 263 aa20.52■□□□□ 0.88
NPLOC4-215ENST00000574095 DNAH3Q8TD57 4116 aa20.51■□□□□ 0.87
NPLOC4-215ENST00000574095 AP4M1O00189 453 aa20.51■□□□□ 0.87
NPLOC4-215ENST00000574095 OR3A3P47888 321 aa20.51■□□□□ 0.87
NPLOC4-215ENST00000574095 LY6G6FQ5SQ64 297 aa20.51■□□□□ 0.87
NPLOC4-215ENST00000574095 ZNF880Q6PDB4 577 aa20.51■□□□□ 0.87
NPLOC4-215ENST00000574095 FAM89BQ8N5H3 189 aa20.51■□□□□ 0.87
NPLOC4-215ENST00000574095 HDHD3Q9BSH5 251 aaPredicted RBP20.51■□□□□ 0.87
NPLOC4-215ENST00000574095 AK3Q9UIJ7 227 aa20.51■□□□□ 0.87
NPLOC4-215ENST00000574095 REC114Q7Z4M0 266 aa20.5■□□□□ 0.87
NPLOC4-215ENST00000574095 FAM71E2Q8N5Q1 922 aa20.5■□□□□ 0.87
NPLOC4-215ENST00000574095 COMMD1Q8N668 190 aa20.5■□□□□ 0.87
NPLOC4-215ENST00000574095 OR2AK2Q8NG84 335 aa20.5■□□□□ 0.87
NPLOC4-215ENST00000574095 NABP2Q9BQ15 211 aa20.5■□□□□ 0.87
NPLOC4-215ENST00000574095 HSPB9Q9BQS6 159 aa20.5■□□□□ 0.87
NPLOC4-215ENST00000574095 MRPL20Q9BYC9 149 aaKnown RBP20.5■□□□□ 0.87
NPLOC4-215ENST00000574095 ACOT13Q9NPJ3 140 aa20.5■□□□□ 0.87
NPLOC4-215ENST00000574095 ZFP57Q9NU63 452 aa20.5■□□□□ 0.87
NPLOC4-215ENST00000574095 VEGFCP49767 419 aa20.49■□□□□ 0.87
NPLOC4-215ENST00000574095 TMEM50BP56557 158 aa20.49■□□□□ 0.87
NPLOC4-215ENST00000574095 TBCEQ15813 527 aaPredicted RBP20.49■□□□□ 0.87
NPLOC4-215ENST00000574095 SSX1Q16384 188 aa20.49■□□□□ 0.87
NPLOC4-215ENST00000574095 C2orf76Q3KRA6 126 aa20.49■□□□□ 0.87
NPLOC4-215ENST00000574095 ETV3LQ6ZN32 361 aa20.49■□□□□ 0.87
NPLOC4-215ENST00000574095 ZNF833PQ6ZTB9 187 aa20.49■□□□□ 0.87
NPLOC4-215ENST00000574095 C8orf86Q6ZUL3 223 aa20.49■□□□□ 0.87
NPLOC4-215ENST00000574095 RITA1Q96K30 269 aa20.49■□□□□ 0.87
NPLOC4-215ENST00000574095 AURKAIP1Q9NWT8 199 aaPredicted RBP20.49■□□□□ 0.87
NPLOC4-215ENST00000574095 STEAP1Q9UHE8 339 aa20.49■□□□□ 0.87
NPLOC4-215ENST00000574095 BLOC1S6Q9UL45 172 aa20.49■□□□□ 0.87
NPLOC4-215ENST00000574095 RAB26Q9ULW5 256 aa20.49■□□□□ 0.87
NPLOC4-215ENST00000574095 V9GY05 133 aa20.49■□□□□ 0.87
NPLOC4-215ENST00000574095 SAA2-SAA4A0A096LPE2 208 aa20.48■□□□□ 0.87
NPLOC4-215ENST00000574095 FOXI3A8MTJ6 420 aaPredicted RBP20.48■□□□□ 0.87
NPLOC4-215ENST00000574095 NUDT19A8MXV4 375 aa20.48■□□□□ 0.87
NPLOC4-215ENST00000574095 ST8SIA5O15466 376 aa20.48■□□□□ 0.87
NPLOC4-215ENST00000574095 SAA2P0DJI9 122 aaPredicted RBP20.48■□□□□ 0.87
NPLOC4-215ENST00000574095 SOX6P35712 828 aa20.48■□□□□ 0.87
NPLOC4-215ENST00000574095 PNLIPRP3Q17RR3 467 aa20.48■□□□□ 0.87
NPLOC4-215ENST00000574095 HES5Q5TA89 166 aa20.48■□□□□ 0.87
NPLOC4-215ENST00000574095 TEX38Q6PEX7 206 aa20.48■□□□□ 0.87
NPLOC4-215ENST00000574095 ZNF367Q7RTV3 350 aa20.48■□□□□ 0.87
NPLOC4-215ENST00000574095 LINC00482Q8N8I6 264 aa20.48■□□□□ 0.87
NPLOC4-215ENST00000574095 FAM3DQ96BQ1 224 aa20.48■□□□□ 0.87
NPLOC4-215ENST00000574095 IFI27L2Q9H2X8 130 aa20.48■□□□□ 0.87
NPLOC4-215ENST00000574095 RIMS4Q9H426 269 aaPredicted RBP20.48■□□□□ 0.87
NPLOC4-215ENST00000574095 SLC2A2P11168 524 aaPredicted RBP20.47■□□□□ 0.87
NPLOC4-215ENST00000574095 THBS3P49746 956 aa20.47■□□□□ 0.87
NPLOC4-215ENST00000574095 MMDQ15546 238 aa20.47■□□□□ 0.87
NPLOC4-215ENST00000574095 LCNL1Q6ZST4 164 aa20.47■□□□□ 0.87
NPLOC4-215ENST00000574095 MRPL41Q8IXM3 137 aaKnown RBP20.47■□□□□ 0.87
NPLOC4-215ENST00000574095 KLHL30-AS1Q8NEE0 82 aa20.47■□□□□ 0.87
NPLOC4-215ENST00000574095 MRAPQ8TCY5 172 aa20.47■□□□□ 0.87
NPLOC4-215ENST00000574095 ARHGAP5-AS1Q96IT6 56 aa20.47■□□□□ 0.87
NPLOC4-215ENST00000574095 HSF4Q9ULV5 492 aa20.47■□□□□ 0.87
NPLOC4-215ENST00000574095 TRBV6-6A0A0A6YYG2 114 aa20.46■□□□□ 0.87
NPLOC4-215ENST00000574095 CNTFRP26992 372 aa20.46■□□□□ 0.87
NPLOC4-215ENST00000574095 ACTBP60709 375 aa20.46■□□□□ 0.87
NPLOC4-215ENST00000574095 PLA2G7Q13093 441 aa20.46■□□□□ 0.87
NPLOC4-215ENST00000574095 MOB1BQ7L9L4 216 aa20.46■□□□□ 0.87
NPLOC4-215ENST00000574095 RCC1LQ96I51 464 aaKnown RBP20.46■□□□□ 0.87
NPLOC4-215ENST00000574095 GON7Q9BXV9 100 aa20.46■□□□□ 0.87
NPLOC4-215ENST00000574095 PECRQ9BY49 303 aa20.46■□□□□ 0.87
NPLOC4-215ENST00000574095 PARP12Q9H0J9 701 aaKnown RBP20.46■□□□□ 0.87
NPLOC4-215ENST00000574095 RRP9O43818 475 aaKnown RBP20.45■□□□□ 0.86
NPLOC4-215ENST00000574095 ATP6V1G2O95670 118 aa20.45■□□□□ 0.86
NPLOC4-215ENST00000574095 RPLP1P05386 114 aaKnown RBP20.45■□□□□ 0.86
NPLOC4-215ENST00000574095 PSMD7P51665 324 aa20.45■□□□□ 0.86
NPLOC4-215ENST00000574095 ZNF251Q9BRH9 671 aa20.45■□□□□ 0.86
NPLOC4-215ENST00000574095 SLC23A1Q9UHI7 598 aa20.45■□□□□ 0.86
NPLOC4-215ENST00000574095 ZNF107Q9UII5 783 aaPredicted RBP20.45■□□□□ 0.86
NPLOC4-215ENST00000574095 TMEM272A0A1B0GTI8 110 aa20.44■□□□□ 0.86
NPLOC4-215ENST00000574095 SHISA3A0PJX4 238 aa20.44■□□□□ 0.86
NPLOC4-215ENST00000574095 LDLRAD4O15165 306 aa20.44■□□□□ 0.86
NPLOC4-215ENST00000574095 DENRO43583 198 aaKnown RBP20.44■□□□□ 0.86
NPLOC4-215ENST00000574095 HLA-DRB3P79483 266 aa20.44■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms