RNA–Protein interactions for RNA: ENST00000573989.1

TRAPPC1-206, Transcript of trafficking protein particle complex 1, humanhuman

TSL 2

Gene TRAPPC1, Length 436 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC1-206ENST00000573989 PAX6P26367 422 aa10.3□□□□□ -0.76
TRAPPC1-206ENST00000573989 PPP1CCP36873 323 aaKnown RBP10.3□□□□□ -0.76
TRAPPC1-206ENST00000573989 CEACAM6P40199 344 aa10.3□□□□□ -0.76
TRAPPC1-206ENST00000573989 LY6EQ16553 131 aa10.3□□□□□ -0.76
TRAPPC1-206ENST00000573989 TMEM69Q5SWH9 247 aa10.3□□□□□ -0.76
TRAPPC1-206ENST00000573989 LDLRAD2Q5SZI1 272 aa10.3□□□□□ -0.76
TRAPPC1-206ENST00000573989 UTF1Q5T230 341 aa10.3□□□□□ -0.76
TRAPPC1-206ENST00000573989 Q6ZS49 121 aa10.3□□□□□ -0.76
TRAPPC1-206ENST00000573989 ZNF439Q8NDP4 499 aa10.3□□□□□ -0.76
TRAPPC1-206ENST00000573989 OR10J5Q8NHC4 309 aa10.3□□□□□ -0.76
TRAPPC1-206ENST00000573989 ISOC1Q96CN7 298 aa10.3□□□□□ -0.76
TRAPPC1-206ENST00000573989 AKR1E2Q96JD6 320 aa10.3□□□□□ -0.76
TRAPPC1-206ENST00000573989 COL6A5A8TX70 2615 aa10.3□□□□□ -0.76
TRAPPC1-206ENST00000573989 A0A1B0GUS0 222 aa10.29□□□□□ -0.76
TRAPPC1-206ENST00000573989 FAM25AB3EWG3 89 aa10.29□□□□□ -0.76
TRAPPC1-206ENST00000573989 FAM25CB3EWG5 89 aa10.29□□□□□ -0.76
TRAPPC1-206ENST00000573989 FAM25GB3EWG6 89 aa10.29□□□□□ -0.76
TRAPPC1-206ENST00000573989 ITGB1BP1O14713 200 aa10.29□□□□□ -0.76
TRAPPC1-206ENST00000573989 CTXN2P0C2S0 81 aa10.29□□□□□ -0.76
TRAPPC1-206ENST00000573989 CBX5P45973 191 aa10.29□□□□□ -0.76
TRAPPC1-206ENST00000573989 ZNF816Q0VGE8 651 aaPredicted RBP10.29□□□□□ -0.76
TRAPPC1-206ENST00000573989 GNMTQ14749 295 aa10.29□□□□□ -0.76
TRAPPC1-206ENST00000573989 SPCS2Q15005 226 aa10.29□□□□□ -0.76
TRAPPC1-206ENST00000573989 CT45A1Q5HYN5 189 aa10.29□□□□□ -0.76
TRAPPC1-206ENST00000573989 Q6ZPA2 131 aa10.29□□□□□ -0.76
TRAPPC1-206ENST00000573989 IZUMO1Q8IYV9 350 aa10.29□□□□□ -0.76
TRAPPC1-206ENST00000573989 LYG1Q8N1E2 194 aa10.29□□□□□ -0.76
TRAPPC1-206ENST00000573989 CT45A3Q8NHU0 189 aa10.29□□□□□ -0.76
TRAPPC1-206ENST00000573989 NUDCD2Q8WVJ2 157 aa10.29□□□□□ -0.76
TRAPPC1-206ENST00000573989 CAPSLQ8WWF8 208 aa10.29□□□□□ -0.76
TRAPPC1-206ENST00000573989 MDFIQ99750 246 aa10.29□□□□□ -0.76
TRAPPC1-206ENST00000573989 GINS4Q9BRT9 223 aa10.29□□□□□ -0.76
TRAPPC1-206ENST00000573989 ST6GALNAC5Q9BVH7 336 aa10.29□□□□□ -0.76
TRAPPC1-206ENST00000573989 AUNIPQ9H7T9 357 aa10.29□□□□□ -0.76
TRAPPC1-206ENST00000573989 PIPOXQ9P0Z9 390 aa10.29□□□□□ -0.76
TRAPPC1-206ENST00000573989 ZNF230Q9UIE0 474 aaPredicted RBP10.29□□□□□ -0.76
TRAPPC1-206ENST00000573989 ADAM30Q9UKF2 790 aa10.29□□□□□ -0.76
TRAPPC1-206ENST00000573989 TCF19Q9Y242 345 aa10.29□□□□□ -0.76
TRAPPC1-206ENST00000573989 TMEM89A2RUT3 159 aa10.28□□□□□ -0.76
TRAPPC1-206ENST00000573989 H3BMQ9 156 aa10.28□□□□□ -0.76
TRAPPC1-206ENST00000573989 BET1O15155 118 aa10.28□□□□□ -0.76
TRAPPC1-206ENST00000573989 FAM106CPP0CH98 169 aa10.28□□□□□ -0.76
TRAPPC1-206ENST00000573989 RAB13P51153 203 aa10.28□□□□□ -0.76
TRAPPC1-206ENST00000573989 ZNF134P52741 427 aa10.28□□□□□ -0.76
TRAPPC1-206ENST00000573989 ZNF137PP52743 207 aa10.28□□□□□ -0.76
TRAPPC1-206ENST00000573989 C16orf82Q7Z2V1 217 aa10.28□□□□□ -0.76
TRAPPC1-206ENST00000573989 MOB3BQ86TA1 216 aa10.28□□□□□ -0.76
TRAPPC1-206ENST00000573989 THNSL2Q86YJ6 484 aa10.28□□□□□ -0.76
TRAPPC1-206ENST00000573989 TGIF2LXQ8IUE1 241 aa10.28□□□□□ -0.76
TRAPPC1-206ENST00000573989 OR4F5Q8NH21 305 aa10.28□□□□□ -0.76
TRAPPC1-206ENST00000573989 S1PR3Q99500 378 aa10.28□□□□□ -0.76
TRAPPC1-206ENST00000573989 CABLES2Q9BTV7 478 aa10.28□□□□□ -0.76
TRAPPC1-206ENST00000573989 CCDC59Q9P031 241 aaKnown RBP10.28□□□□□ -0.76
TRAPPC1-206ENST00000573989 ELF5Q9UKW6 265 aaPredicted RBP10.28□□□□□ -0.76
TRAPPC1-206ENST00000573989 IGHV1-3A0A0C4DH29 117 aa10.27□□□□□ -0.77
TRAPPC1-206ENST00000573989 RAB29O14966 203 aa10.27□□□□□ -0.77
TRAPPC1-206ENST00000573989 SLC31A2O15432 143 aa10.27□□□□□ -0.77
TRAPPC1-206ENST00000573989 RGS5O15539 181 aa10.27□□□□□ -0.77
TRAPPC1-206ENST00000573989 LANCL1O43813 399 aa10.27□□□□□ -0.77
TRAPPC1-206ENST00000573989 HPGDSO60760 199 aa10.27□□□□□ -0.77
TRAPPC1-206ENST00000573989 NDUFA7O95182 113 aa10.27□□□□□ -0.77
TRAPPC1-206ENST00000573989 EIF4EP06730 217 aaKnown RBP10.27□□□□□ -0.77
TRAPPC1-206ENST00000573989 GSTT2P0CG29 244 aa10.27□□□□□ -0.77
TRAPPC1-206ENST00000573989 GSTT2BP0CG30 244 aa10.27□□□□□ -0.77
TRAPPC1-206ENST00000573989 PRSS3P35030 304 aa10.27□□□□□ -0.77
TRAPPC1-206ENST00000573989 TAS2R20P59543 309 aa10.27□□□□□ -0.77
TRAPPC1-206ENST00000573989 ARPC4P59998 168 aa10.27□□□□□ -0.77
TRAPPC1-206ENST00000573989 HES1Q14469 280 aa10.27□□□□□ -0.77
TRAPPC1-206ENST00000573989 FAM53AQ6NSI3 398 aaPredicted RBP10.27□□□□□ -0.77
TRAPPC1-206ENST00000573989 FAM71F2Q6NXP2 309 aa10.27□□□□□ -0.77
TRAPPC1-206ENST00000573989 C12orf54Q6X4T0 127 aa10.27□□□□□ -0.77
TRAPPC1-206ENST00000573989 C5orf24Q7Z6I8 188 aa10.27□□□□□ -0.77
TRAPPC1-206ENST00000573989 SPATA3Q8NHX4 192 aa10.27□□□□□ -0.77
TRAPPC1-206ENST00000573989 PIFOQ8TCI5 191 aa10.27□□□□□ -0.77
TRAPPC1-206ENST00000573989 C15orf40Q8WUR7 153 aa10.27□□□□□ -0.77
TRAPPC1-206ENST00000573989 RTN4IP1Q8WWV3 396 aaPredicted RBP10.27□□□□□ -0.77
TRAPPC1-206ENST00000573989 MAFIPQ8WZ33 124 aa10.27□□□□□ -0.77
TRAPPC1-206ENST00000573989 NPFFR1Q9GZQ6 430 aa10.27□□□□□ -0.77
TRAPPC1-206ENST00000573989 TOLLIPQ9H0E2 274 aa10.27□□□□□ -0.77
TRAPPC1-206ENST00000573989 BEX1Q9HBH7 125 aa10.27□□□□□ -0.77
TRAPPC1-206ENST00000573989 IFT46Q9NQC8 304 aa10.27□□□□□ -0.77
TRAPPC1-206ENST00000573989 RDH8Q9NYR8 311 aa10.27□□□□□ -0.77
TRAPPC1-206ENST00000573989 C1RLQ9NZP8 487 aa10.27□□□□□ -0.77
TRAPPC1-206ENST00000573989 OR1A1Q9P1Q5 309 aa10.27□□□□□ -0.77
TRAPPC1-206ENST00000573989 RSL24D1Q9UHA3 163 aaKnown RBP10.27□□□□□ -0.77
TRAPPC1-206ENST00000573989 ZNF221Q9UK13 617 aa10.27□□□□□ -0.77
TRAPPC1-206ENST00000573989 RBM7Q9Y580 266 aaKnown RBP10.27□□□□□ -0.77
TRAPPC1-206ENST00000573989 CEPT1Q9Y6K0 416 aa10.27□□□□□ -0.77
TRAPPC1-206ENST00000573989 FBN1P35555 2871 aaKnown RBP10.26□□□□□ -0.77
TRAPPC1-206ENST00000573989 TRBV6-7A0A0A0MS04 114 aa10.26□□□□□ -0.77
TRAPPC1-206ENST00000573989 A0A1W2PPI3 338 aa10.26□□□□□ -0.77
TRAPPC1-206ENST00000573989 A6NDX4 124 aa10.26□□□□□ -0.77
TRAPPC1-206ENST00000573989 M0QZK8 103 aa10.26□□□□□ -0.77
TRAPPC1-206ENST00000573989 ZNF701M0R085 212 aaPredicted RBP10.26□□□□□ -0.77
TRAPPC1-206ENST00000573989 TIMM23O14925 209 aa10.26□□□□□ -0.77
TRAPPC1-206ENST00000573989 ELK1P19419 428 aa10.26□□□□□ -0.77
TRAPPC1-206ENST00000573989 REG1BP48304 166 aa10.26□□□□□ -0.77
TRAPPC1-206ENST00000573989 COMPP49747 757 aaPredicted RBP10.26□□□□□ -0.77
TRAPPC1-206ENST00000573989 RAG2P55895 527 aa10.26□□□□□ -0.77
TRAPPC1-206ENST00000573989 IGSF11Q5DX21 431 aa10.26□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms