RNA–Protein interactions for RNA: ENST00000573852.5

SCARF1-206, Transcript of scavenger receptor class F member 1, humanhuman

TSL 1 (best)

Gene SCARF1, Length 2,698 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARF1-206ENST00000573852 ELLP55199 621 aaPredicted RBP16.14■□□□□ 0.17
SCARF1-206ENST00000573852 SERF2P84101 59 aa16.14■□□□□ 0.17
SCARF1-206ENST00000573852 HLA-CQ95604 372 aa16.14■□□□□ 0.17
SCARF1-206ENST00000573852 APH1AQ96BI3 265 aa16.14■□□□□ 0.17
SCARF1-206ENST00000573852 WDR61Q9GZS3 305 aaKnown RBP16.14■□□□□ 0.17
SCARF1-206ENST00000573852 OPA3Q9H6K4 179 aa16.14■□□□□ 0.17
SCARF1-206ENST00000573852 VAX2Q9UIW0 290 aa16.14■□□□□ 0.17
SCARF1-206ENST00000573852 KCNS2Q9ULS6 477 aa16.14■□□□□ 0.17
SCARF1-206ENST00000573852 FAM186AA6NE01 2351 aa16.14■□□□□ 0.17
SCARF1-206ENST00000573852 PGA5P0DJD9 388 aa16.13■□□□□ 0.17
SCARF1-206ENST00000573852 HBG1P69891 147 aa16.13■□□□□ 0.17
SCARF1-206ENST00000573852 HBG2P69892 147 aa16.13■□□□□ 0.17
SCARF1-206ENST00000573852 PLP2Q04941 152 aa16.13■□□□□ 0.17
SCARF1-206ENST00000573852 TMEM41BQ5BJD5 291 aa16.13■□□□□ 0.17
SCARF1-206ENST00000573852 P2RX4Q99571 388 aa16.13■□□□□ 0.17
SCARF1-206ENST00000573852 FAM173AQ9BQD7 235 aa16.13■□□□□ 0.17
SCARF1-206ENST00000573852 RBKSQ9H477 322 aa16.13■□□□□ 0.17
SCARF1-206ENST00000573852 RBM7Q9Y580 266 aaKnown RBP16.13■□□□□ 0.17
SCARF1-206ENST00000573852 KIAA2026Q5HYC2 2103 aa16.13■□□□□ 0.17
SCARF1-206ENST00000573852 MAP1LC3B2A6NCE7 125 aa16.13■□□□□ 0.17
SCARF1-206ENST00000573852 OR5H1A6NKK0 313 aa16.13■□□□□ 0.17
SCARF1-206ENST00000573852 B4E171 279 aa16.13■□□□□ 0.17
SCARF1-206ENST00000573852 SIRPB1O00241 398 aa16.13■□□□□ 0.17
SCARF1-206ENST00000573852 PTBP3O95758 552 aaKnown RBP16.13■□□□□ 0.17
SCARF1-206ENST00000573852 FABP4P15090 132 aa16.13■□□□□ 0.17
SCARF1-206ENST00000573852 TSPAN7P41732 249 aa16.13■□□□□ 0.17
SCARF1-206ENST00000573852 MAGEA5P43359 124 aa16.13■□□□□ 0.17
SCARF1-206ENST00000573852 ZXDAP98168 799 aa16.13■□□□□ 0.17
SCARF1-206ENST00000573852 SPATA46Q5T0L3 261 aa16.13■□□□□ 0.17
SCARF1-206ENST00000573852 NUFIP2Q7Z417 695 aaKnown RBP16.13■□□□□ 0.17
SCARF1-206ENST00000573852 MRGPRGQ86SM5 289 aa16.13■□□□□ 0.17
SCARF1-206ENST00000573852 MAP1LC3BQ9GZQ8 125 aa16.13■□□□□ 0.17
SCARF1-206ENST00000573852 RYDENQ9NUL5 291 aaKnown RBP16.13■□□□□ 0.17
SCARF1-206ENST00000573852 LRP5LA4QPB2 252 aa16.12■□□□□ 0.17
SCARF1-206ENST00000573852 WDR1O75083 606 aa16.12■□□□□ 0.17
SCARF1-206ENST00000573852 HIST1H1BP16401 226 aaKnown RBP16.12■□□□□ 0.17
SCARF1-206ENST00000573852 HNF4GQ14541 408 aa16.12■□□□□ 0.17
SCARF1-206ENST00000573852 WDR25Q64LD2 544 aaPredicted RBP16.12■□□□□ 0.17
SCARF1-206ENST00000573852 C6orf15Q6UXA7 325 aaPredicted RBP16.12■□□□□ 0.17
SCARF1-206ENST00000573852 PKIBQ9C010 78 aa16.12■□□□□ 0.17
SCARF1-206ENST00000573852 TRBV24-1A0A075B6N3 115 aa16.12■□□□□ 0.17
SCARF1-206ENST00000573852 LY86O95711 162 aa16.12■□□□□ 0.17
SCARF1-206ENST00000573852 C3AR1Q16581 482 aa16.12■□□□□ 0.17
SCARF1-206ENST00000573852 ACSF3Q4G176 576 aaPredicted RBP16.12■□□□□ 0.17
SCARF1-206ENST00000573852 TMEM9BQ9NQ34 198 aa16.12■□□□□ 0.17
SCARF1-206ENST00000573852 IGKV1D-33P01593 117 aa16.12■□□□□ 0.17
SCARF1-206ENST00000573852 IGKV1-33P01594 117 aa16.12■□□□□ 0.17
SCARF1-206ENST00000573852 ZNF497Q6ZNH5 498 aa16.12■□□□□ 0.17
SCARF1-206ENST00000573852 TAF15Q92804 592 aaKnown RBP eCLIP16.12■□□□□ 0.17
SCARF1-206ENST00000573852 LIN7CQ9NUP9 197 aaKnown RBP16.12■□□□□ 0.17
SCARF1-206ENST00000573852 TRAPPC2LQ9UL33 140 aa16.12■□□□□ 0.17
SCARF1-206ENST00000573852 KMT2EQ8IZD2 1858 aa16.11■□□□□ 0.17
SCARF1-206ENST00000573852 UBE2L5PA0A1B0GUS4 154 aa16.11■□□□□ 0.17
SCARF1-206ENST00000573852 ZNF737O75373 536 aa16.11■□□□□ 0.17
SCARF1-206ENST00000573852 CD55P08174 381 aa16.11■□□□□ 0.17
SCARF1-206ENST00000573852 APLNRP35414 380 aa16.11■□□□□ 0.17
SCARF1-206ENST00000573852 GPX4P36969 197 aaPredicted RBP16.11■□□□□ 0.17
SCARF1-206ENST00000573852 CLN3Q13286 438 aa16.11■□□□□ 0.17
SCARF1-206ENST00000573852 RPP25LQ8N5L8 163 aaKnown RBP16.11■□□□□ 0.17
SCARF1-206ENST00000573852 J3QT63 122 aa16.11■□□□□ 0.17
SCARF1-206ENST00000573852 OR2H2O95918 312 aa16.11■□□□□ 0.17
SCARF1-206ENST00000573852 OPN1MWP04001 364 aa16.11■□□□□ 0.17
SCARF1-206ENST00000573852 OPN1MW2P0DN77 364 aa16.11■□□□□ 0.17
SCARF1-206ENST00000573852 OPN1MW3P0DN78 364 aa16.11■□□□□ 0.17
SCARF1-206ENST00000573852 CD81P60033 236 aa16.11■□□□□ 0.17
SCARF1-206ENST00000573852 TLE1Q04724 770 aa16.11■□□□□ 0.17
SCARF1-206ENST00000573852 WDR86Q86TI4 376 aa16.11■□□□□ 0.17
SCARF1-206ENST00000573852 DRAM1Q8N682 238 aa16.11■□□□□ 0.17
SCARF1-206ENST00000573852 SNX22Q96L94 193 aa16.11■□□□□ 0.17
SCARF1-206ENST00000573852 PRSS50Q9UI38 385 aa16.11■□□□□ 0.17
SCARF1-206ENST00000573852 HOXA6P31267 233 aa16.1■□□□□ 0.17
SCARF1-206ENST00000573852 CEACAM6P40199 344 aa16.1■□□□□ 0.17
SCARF1-206ENST00000573852 SLC38A11Q08AI6 406 aa16.1■□□□□ 0.17
SCARF1-206ENST00000573852 GAMTQ14353 236 aa16.1■□□□□ 0.17
SCARF1-206ENST00000573852 OR8G2PQ6IF36 304 aa16.1■□□□□ 0.17
SCARF1-206ENST00000573852 FGFRL1Q8N441 504 aa16.1■□□□□ 0.17
SCARF1-206ENST00000573852 LHX4Q969G2 390 aa16.1■□□□□ 0.17
SCARF1-206ENST00000573852 PINX1Q96BK5 328 aaKnown RBP16.1■□□□□ 0.17
SCARF1-206ENST00000573852 ARHGAP21Q5T5U3 1957 aa16.1■□□□□ 0.17
SCARF1-206ENST00000573852 MT-CO3P00414 261 aa16.1■□□□□ 0.17
SCARF1-206ENST00000573852 TTTY12Q9BZ98 90 aa16.1■□□□□ 0.17
SCARF1-206ENST00000573852 STRADBQ9C0K7 418 aa16.1■□□□□ 0.17
SCARF1-206ENST00000573852 CDH20Q9HBT6 801 aa16.1■□□□□ 0.17
SCARF1-206ENST00000573852 SLC39A9Q9NUM3 307 aa16.1■□□□□ 0.17
SCARF1-206ENST00000573852 GFOD1Q9NXC2 390 aa16.1■□□□□ 0.17
SCARF1-206ENST00000573852 B4GALT7Q9UBV7 327 aa16.1■□□□□ 0.17
SCARF1-206ENST00000573852 LOXL2Q9Y4K0 774 aa16.1■□□□□ 0.17
SCARF1-206ENST00000573852 TGOLN2O43493 480 aa16.09■□□□□ 0.17
SCARF1-206ENST00000573852 FOSL1P15407 271 aa16.09■□□□□ 0.17
SCARF1-206ENST00000573852 DEFA6Q01524 100 aa16.09■□□□□ 0.17
SCARF1-206ENST00000573852 VASH2Q86V25 355 aa16.09■□□□□ 0.17
SCARF1-206ENST00000573852 RHOVQ96L33 236 aa16.09■□□□□ 0.17
SCARF1-206ENST00000573852 SMIM7Q9BQ49 75 aa16.09■□□□□ 0.17
SCARF1-206ENST00000573852 PARD6GQ9BYG4 376 aaPredicted RBP16.09■□□□□ 0.17
SCARF1-206ENST00000573852 CTDSP1Q9GZU7 261 aa16.09■□□□□ 0.17
SCARF1-206ENST00000573852 HMGB3O15347 200 aaKnown RBP16.09■□□□□ 0.17
SCARF1-206ENST00000573852 IFNA1P01562 189 aa16.09■□□□□ 0.17
SCARF1-206ENST00000573852 ADIRFQ15847 76 aa16.09■□□□□ 0.17
SCARF1-206ENST00000573852 MOB1BQ7L9L4 216 aa16.09■□□□□ 0.17
SCARF1-206ENST00000573852 TMEM105Q8N8V8 129 aa16.09■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms