RNA–Protein interactions for RNA: ENST00000573108.1

TRIM25-207, Transcript of tripartite motif containing 25, humanhuman

TSL 3

Gene TRIM25, Length 952 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM25-207ENST00000573108 IGKV1D-33P01593 117 aa9.48□□□□□ -0.89
TRIM25-207ENST00000573108 IGKV1-33P01594 117 aa9.48□□□□□ -0.89
TRIM25-207ENST00000573108 IGHG2P01859 326 aa9.48□□□□□ -0.89
TRIM25-207ENST00000573108 IGHV3-43DP0DP04 118 aa9.48□□□□□ -0.89
TRIM25-207ENST00000573108 ARSBP15848 533 aa9.48□□□□□ -0.89
TRIM25-207ENST00000573108 GNG10P50151 68 aa9.48□□□□□ -0.89
TRIM25-207ENST00000573108 RAB25P57735 213 aa9.48□□□□□ -0.89
TRIM25-207ENST00000573108 DCTN2Q13561 401 aaKnown RBP9.48□□□□□ -0.89
TRIM25-207ENST00000573108 RAB11BQ15907 218 aa9.48□□□□□ -0.89
TRIM25-207ENST00000573108 DEFB136Q30KP8 78 aa9.48□□□□□ -0.89
TRIM25-207ENST00000573108 HES5Q5TA89 166 aa9.48□□□□□ -0.89
TRIM25-207ENST00000573108 C22orf42Q6IC83 251 aa9.48□□□□□ -0.89
TRIM25-207ENST00000573108 SLC16A12Q6ZSM3 486 aa9.48□□□□□ -0.89
TRIM25-207ENST00000573108 LCNL1Q6ZST4 164 aa9.48□□□□□ -0.89
TRIM25-207ENST00000573108 SLC35E3Q7Z769 313 aa9.48□□□□□ -0.89
TRIM25-207ENST00000573108 ZNF695Q8IW36 515 aa9.48□□□□□ -0.89
TRIM25-207ENST00000573108 STPG2Q8N412 459 aa9.48□□□□□ -0.89
TRIM25-207ENST00000573108 FAM89BQ8N5H3 189 aa9.48□□□□□ -0.89
TRIM25-207ENST00000573108 OR1L1Q8NH94 360 aa9.48□□□□□ -0.89
TRIM25-207ENST00000573108 MRPL30Q8TCC3 161 aaKnown RBP9.48□□□□□ -0.89
TRIM25-207ENST00000573108 FAM3DQ96BQ1 224 aa9.48□□□□□ -0.89
TRIM25-207ENST00000573108 PRR25Q96S07 402 aa9.48□□□□□ -0.89
TRIM25-207ENST00000573108 AMMECR1Q9Y4X0 333 aaPredicted RBP9.48□□□□□ -0.89
TRIM25-207ENST00000573108 CCL24O00175 119 aa9.47□□□□□ -0.89
TRIM25-207ENST00000573108 LDLRAD4O15165 306 aa9.47□□□□□ -0.89
TRIM25-207ENST00000573108 FGF16O43320 207 aa9.47□□□□□ -0.89
TRIM25-207ENST00000573108 HBZP02008 142 aa9.47□□□□□ -0.89
TRIM25-207ENST00000573108 RPLP1P05386 114 aaKnown RBP9.47□□□□□ -0.89
TRIM25-207ENST00000573108 NHLRC4P0CG21 123 aaPredicted RBP9.47□□□□□ -0.89
TRIM25-207ENST00000573108 GALP22466 123 aa9.47□□□□□ -0.89
TRIM25-207ENST00000573108 BLVRBP30043 206 aaPredicted RBP9.47□□□□□ -0.89
TRIM25-207ENST00000573108 SLC6A1P30531 599 aa9.47□□□□□ -0.89
TRIM25-207ENST00000573108 PSMD7P51665 324 aa9.47□□□□□ -0.89
TRIM25-207ENST00000573108 TMEM50BP56557 158 aa9.47□□□□□ -0.89
TRIM25-207ENST00000573108 SLC35B1P78383 322 aa9.47□□□□□ -0.89
TRIM25-207ENST00000573108 MADCAM1Q13477 382 aa9.47□□□□□ -0.89
TRIM25-207ENST00000573108 KCTD21Q4G0X4 260 aa9.47□□□□□ -0.89
TRIM25-207ENST00000573108 NR2C2APQ86WQ0 139 aa9.47□□□□□ -0.89
TRIM25-207ENST00000573108 OR52M1Q8NGK5 317 aa9.47□□□□□ -0.89
TRIM25-207ENST00000573108 FCGR1BQ92637 280 aa9.47□□□□□ -0.89
TRIM25-207ENST00000573108 NEDD4LQ96PU5 975 aa9.47□□□□□ -0.89
TRIM25-207ENST00000573108 ASCL2Q99929 193 aa9.47□□□□□ -0.89
TRIM25-207ENST00000573108 MBNL3Q9NUK0 354 aaKnown RBP9.47□□□□□ -0.89
TRIM25-207ENST00000573108 TXNL4BQ9NX01 149 aaKnown RBP9.47□□□□□ -0.89
TRIM25-207ENST00000573108 GFOD1Q9NXC2 390 aa9.47□□□□□ -0.89
TRIM25-207ENST00000573108 IGHV3-72A0A0B4J1Y9 119 aa9.46□□□□□ -0.9
TRIM25-207ENST00000573108 A0A0B4J203 849 aa9.46□□□□□ -0.9
TRIM25-207ENST00000573108 TMEM272A0A1B0GTI8 110 aa9.46□□□□□ -0.9
TRIM25-207ENST00000573108 SMIM30A4D0T7 59 aa9.46□□□□□ -0.9
TRIM25-207ENST00000573108 IFITM5A6NNB3 132 aa9.46□□□□□ -0.9
TRIM25-207ENST00000573108 FOXI3A8MTJ6 420 aaPredicted RBP9.46□□□□□ -0.9
TRIM25-207ENST00000573108 SDCBPO00560 298 aaPredicted RBP9.46□□□□□ -0.9
TRIM25-207ENST00000573108 RAMP3O60896 148 aa9.46□□□□□ -0.9
TRIM25-207ENST00000573108 CA11O75493 328 aa9.46□□□□□ -0.9
TRIM25-207ENST00000573108 FGF9P31371 208 aaPredicted RBP9.46□□□□□ -0.9
TRIM25-207ENST00000573108 VEGFCP49767 419 aa9.46□□□□□ -0.9
TRIM25-207ENST00000573108 ZNF134P52741 427 aa9.46□□□□□ -0.9
TRIM25-207ENST00000573108 FOXRED2Q8IWF2 684 aa9.46□□□□□ -0.9
TRIM25-207ENST00000573108 PRR18Q8N4B5 295 aa9.46□□□□□ -0.9
TRIM25-207ENST00000573108 COMMD1Q8N668 190 aa9.46□□□□□ -0.9
TRIM25-207ENST00000573108 OR51E2Q9H255 320 aa9.46□□□□□ -0.9
TRIM25-207ENST00000573108 TAF9BQ9HBM6 251 aa9.46□□□□□ -0.9
TRIM25-207ENST00000573108 STEAP1Q9UHE8 339 aa9.46□□□□□ -0.9
TRIM25-207ENST00000573108 PDCD5O14737 125 aa9.45□□□□□ -0.9
TRIM25-207ENST00000573108 SLC31A2O15432 143 aa9.45□□□□□ -0.9
TRIM25-207ENST00000573108 SPINT2O43291 252 aa9.45□□□□□ -0.9
TRIM25-207ENST00000573108 RAB3BP20337 219 aa9.45□□□□□ -0.9
TRIM25-207ENST00000573108 MYL9P24844 172 aa9.45□□□□□ -0.9
TRIM25-207ENST00000573108 REG1BP48304 166 aa9.45□□□□□ -0.9
TRIM25-207ENST00000573108 RAB7AP51149 207 aa9.45□□□□□ -0.9
TRIM25-207ENST00000573108 NEDD8Q15843 81 aa9.45□□□□□ -0.9
TRIM25-207ENST00000573108 CT45A1Q5HYN5 189 aa9.45□□□□□ -0.9
TRIM25-207ENST00000573108 C6orf183Q5T699 404 aa9.45□□□□□ -0.9
TRIM25-207ENST00000573108 TEX38Q6PEX7 206 aa9.45□□□□□ -0.9
TRIM25-207ENST00000573108 OR8H3Q8N146 312 aa9.45□□□□□ -0.9
TRIM25-207ENST00000573108 LINC00311Q8N616 119 aa9.45□□□□□ -0.9
TRIM25-207ENST00000573108 OR10V1Q8NGI7 309 aa9.45□□□□□ -0.9
TRIM25-207ENST00000573108 CT45A3Q8NHU0 189 aa9.45□□□□□ -0.9
TRIM25-207ENST00000573108 RBMXL1Q96E39 390 aaKnown RBP9.45□□□□□ -0.9
TRIM25-207ENST00000573108 EAF1Q96JC9 268 aaPredicted RBP9.45□□□□□ -0.9
TRIM25-207ENST00000573108 HDHD3Q9BSH5 251 aaPredicted RBP9.45□□□□□ -0.9
TRIM25-207ENST00000573108 URM1Q9BTM9 101 aaKnown RBP9.45□□□□□ -0.9
TRIM25-207ENST00000573108 RNF167Q9H6Y7 350 aa9.45□□□□□ -0.9
TRIM25-207ENST00000573108 PLEKHJ1Q9NW61 149 aa9.45□□□□□ -0.9
TRIM25-207ENST00000573108 ZMAT5Q9UDW3 170 aaKnown RBP9.45□□□□□ -0.9
TRIM25-207ENST00000573108 AK3Q9UIJ7 227 aa9.45□□□□□ -0.9
TRIM25-207ENST00000573108 RAB22AQ9UL26 194 aa9.45□□□□□ -0.9
TRIM25-207ENST00000573108 STUB1Q9UNE7 303 aa9.45□□□□□ -0.9
TRIM25-207ENST00000573108 TENM2Q9NT68 2774 aa9.45□□□□□ -0.9
TRIM25-207ENST00000573108 LYSTQ99698 3801 aa9.44□□□□□ -0.9
TRIM25-207ENST00000573108 IGHV1-3A0A0C4DH29 117 aa9.44□□□□□ -0.9
TRIM25-207ENST00000573108 HSD17B6O14756 317 aa9.44□□□□□ -0.9
TRIM25-207ENST00000573108 NAPSAO96009 420 aa9.44□□□□□ -0.9
TRIM25-207ENST00000573108 SLC2A2P11168 524 aaPredicted RBP9.44□□□□□ -0.9
TRIM25-207ENST00000573108 ECI1P42126 302 aa9.44□□□□□ -0.9
TRIM25-207ENST00000573108 GPR12P47775 334 aa9.44□□□□□ -0.9
TRIM25-207ENST00000573108 EBI3Q14213 229 aa9.44□□□□□ -0.9
TRIM25-207ENST00000573108 GNMTQ14749 295 aa9.44□□□□□ -0.9
TRIM25-207ENST00000573108 PNLIPRP3Q17RR3 467 aa9.44□□□□□ -0.9
TRIM25-207ENST00000573108 MORN2Q502X0 79 aa9.44□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms