RNA–Protein interactions for RNA: ENST00000572824.1

NPLOC4-210, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 4

Gene NPLOC4, Length 559 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-210ENST00000572824 S1PR3Q99500 378 aa7.19□□□□□ -1.26
NPLOC4-210ENST00000572824 MRPL20Q9BYC9 149 aaKnown RBP7.19□□□□□ -1.26
NPLOC4-210ENST00000572824 KRTAP3-1Q9BYR8 98 aa7.19□□□□□ -1.26
NPLOC4-210ENST00000572824 BARHL1Q9BZE3 327 aa7.19□□□□□ -1.26
NPLOC4-210ENST00000572824 METTL9Q9H1A3 318 aa7.19□□□□□ -1.26
NPLOC4-210ENST00000572824 KLK15Q9H2R5 256 aa7.19□□□□□ -1.26
NPLOC4-210ENST00000572824 DCLRE1BQ9H816 532 aa7.19□□□□□ -1.26
NPLOC4-210ENST00000572824 RHOFQ9HBH0 211 aa7.19□□□□□ -1.26
NPLOC4-210ENST00000572824 RCC2Q9P258 522 aaKnown RBP7.19□□□□□ -1.26
NPLOC4-210ENST00000572824 FBXO7Q9Y3I1 522 aa7.19□□□□□ -1.26
NPLOC4-210ENST00000572824 RPL36Q9Y3U8 105 aaKnown RBP7.19□□□□□ -1.26
NPLOC4-210ENST00000572824 TRBV5-7A0A0A0MS05 114 aa7.18□□□□□ -1.26
NPLOC4-210ENST00000572824 M0QZK8 103 aa7.18□□□□□ -1.26
NPLOC4-210ENST00000572824 CCL24O00175 119 aa7.18□□□□□ -1.26
NPLOC4-210ENST00000572824 OGG1O15527 345 aa7.18□□□□□ -1.26
NPLOC4-210ENST00000572824 BAG2O95816 211 aa7.18□□□□□ -1.26
NPLOC4-210ENST00000572824 ARHGDIBP52566 201 aa7.18□□□□□ -1.26
NPLOC4-210ENST00000572824 GNB1P62873 340 aa7.18□□□□□ -1.26
NPLOC4-210ENST00000572824 SYT6Q5T7P8 510 aaPredicted RBP7.18□□□□□ -1.26
NPLOC4-210ENST00000572824 RAB12Q6IQ22 244 aa7.18□□□□□ -1.26
NPLOC4-210ENST00000572824 ZFP1Q6P2D0 407 aa7.18□□□□□ -1.26
NPLOC4-210ENST00000572824 SLC25A48Q6ZT89 311 aaKnown RBP7.18□□□□□ -1.26
NPLOC4-210ENST00000572824 HAPLN4Q86UW8 402 aa7.18□□□□□ -1.26
NPLOC4-210ENST00000572824 JAGN1Q8N5M9 183 aa7.18□□□□□ -1.26
NPLOC4-210ENST00000572824 LINC00311Q8N616 119 aa7.18□□□□□ -1.26
NPLOC4-210ENST00000572824 MRPL30Q8TCC3 161 aaKnown RBP7.18□□□□□ -1.26
NPLOC4-210ENST00000572824 HAVCR2Q8TDQ0 301 aa7.18□□□□□ -1.26
NPLOC4-210ENST00000572824 CYGBQ8WWM9 190 aa7.18□□□□□ -1.26
NPLOC4-210ENST00000572824 GGHQ92820 318 aa7.18□□□□□ -1.26
NPLOC4-210ENST00000572824 CREB3L1Q96BA8 519 aa7.18□□□□□ -1.26
NPLOC4-210ENST00000572824 B9D2Q9BPU9 175 aa7.18□□□□□ -1.26
NPLOC4-210ENST00000572824 ABCG5Q9H222 651 aa7.18□□□□□ -1.26
NPLOC4-210ENST00000572824 NCOR1P1Q9H4R4 102 aa7.18□□□□□ -1.26
NPLOC4-210ENST00000572824 TMEM138Q9NPI0 162 aa7.18□□□□□ -1.26
NPLOC4-210ENST00000572824 SMPD3Q9NY59 655 aaPredicted RBP7.18□□□□□ -1.26
NPLOC4-210ENST00000572824 ETAA1Q9NY74 926 aa7.18□□□□□ -1.26
NPLOC4-210ENST00000572824 ZNF107Q9UII5 783 aaPredicted RBP7.18□□□□□ -1.26
NPLOC4-210ENST00000572824 MRPS28Q9Y2Q9 187 aaKnown RBP7.18□□□□□ -1.26
NPLOC4-210ENST00000572824 WSB1Q9Y6I7 421 aa7.18□□□□□ -1.26
NPLOC4-210ENST00000572824 HYDINQ4G0P3 5121 aa7.18□□□□□ -1.26
NPLOC4-210ENST00000572824 TENM2Q9NT68 2774 aa7.17□□□□□ -1.26
NPLOC4-210ENST00000572824 SNTNA6NMZ2 147 aa7.17□□□□□ -1.26
NPLOC4-210ENST00000572824 H3BUI4 141 aa7.17□□□□□ -1.26
NPLOC4-210ENST00000572824 ATP6V0E1O15342 81 aa7.17□□□□□ -1.26
NPLOC4-210ENST00000572824 MAGEB3O15480 346 aa7.17□□□□□ -1.26
NPLOC4-210ENST00000572824 CSTBP04080 98 aaKnown RBP7.17□□□□□ -1.26
NPLOC4-210ENST00000572824 GAPDHP04406 335 aaKnown RBP7.17□□□□□ -1.26
NPLOC4-210ENST00000572824 MGMTP16455 207 aa7.17□□□□□ -1.26
NPLOC4-210ENST00000572824 MYCNOSP40205 109 aa7.17□□□□□ -1.26
NPLOC4-210ENST00000572824 PPP3R1P63098 170 aa7.17□□□□□ -1.26
NPLOC4-210ENST00000572824 GPR50Q13585 617 aa7.17□□□□□ -1.26
NPLOC4-210ENST00000572824 KIAA0141Q14154 515 aaPredicted RBP7.17□□□□□ -1.26
NPLOC4-210ENST00000572824 Q499Y3 187 aa7.17□□□□□ -1.26
NPLOC4-210ENST00000572824 KLHL22Q53GT1 634 aa7.17□□□□□ -1.26
NPLOC4-210ENST00000572824 AWAT2Q6E213 333 aa7.17□□□□□ -1.26
NPLOC4-210ENST00000572824 GLDNQ6ZMI3 551 aaPredicted RBP7.17□□□□□ -1.26
NPLOC4-210ENST00000572824 TGIF2LXQ8IUE1 241 aa7.17□□□□□ -1.26
NPLOC4-210ENST00000572824 Q96MT0 163 aa7.17□□□□□ -1.26
NPLOC4-210ENST00000572824 DERL3Q96Q80 235 aa7.17□□□□□ -1.26
NPLOC4-210ENST00000572824 SULT4A1Q9BR01 284 aa7.17□□□□□ -1.26
NPLOC4-210ENST00000572824 NICN1Q9BSH3 213 aa7.17□□□□□ -1.26
NPLOC4-210ENST00000572824 SELENOIQ9C0D9 397 aa7.17□□□□□ -1.26
NPLOC4-210ENST00000572824 LIN7CQ9NUP9 197 aaKnown RBP7.17□□□□□ -1.26
NPLOC4-210ENST00000572824 BABAM2Q9NXR7 383 aa7.17□□□□□ -1.26
NPLOC4-210ENST00000572824 GNG12Q9UBI6 72 aa7.17□□□□□ -1.26
NPLOC4-210ENST00000572824 DIMT1Q9UNQ2 313 aaKnown RBP7.17□□□□□ -1.26
NPLOC4-210ENST00000572824 PEX16Q9Y5Y5 336 aa7.17□□□□□ -1.26
NPLOC4-210ENST00000572824 A0A0A6YYD4 124 aa7.16□□□□□ -1.26
NPLOC4-210ENST00000572824 AP4M1O00189 453 aa7.16□□□□□ -1.26
NPLOC4-210ENST00000572824 SOX15O60248 233 aa7.16□□□□□ -1.26
NPLOC4-210ENST00000572824 MPZL2O60487 215 aa7.16□□□□□ -1.26
NPLOC4-210ENST00000572824 CRTAPO75718 401 aaPredicted RBP7.16□□□□□ -1.26
NPLOC4-210ENST00000572824 MOSP00540 346 aa7.16□□□□□ -1.26
NPLOC4-210ENST00000572824 CD2P06729 351 aa7.16□□□□□ -1.26
NPLOC4-210ENST00000572824 GTF2F2P13984 249 aa7.16□□□□□ -1.26
NPLOC4-210ENST00000572824 DCKP27707 260 aa7.16□□□□□ -1.26
NPLOC4-210ENST00000572824 BLVRBP30043 206 aaPredicted RBP7.16□□□□□ -1.26
NPLOC4-210ENST00000572824 KCNJ3P48549 501 aa7.16□□□□□ -1.26
NPLOC4-210ENST00000572824 PTTG1IPP53801 180 aa7.16□□□□□ -1.26
NPLOC4-210ENST00000572824 LINC00205P59089 165 aa7.16□□□□□ -1.26
NPLOC4-210ENST00000572824 DEFA5Q01523 94 aa7.16□□□□□ -1.26
NPLOC4-210ENST00000572824 FHL3Q13643 280 aa7.16□□□□□ -1.26
NPLOC4-210ENST00000572824 MMDQ15546 238 aa7.16□□□□□ -1.26
NPLOC4-210ENST00000572824 CCDC58Q4VC31 144 aa7.16□□□□□ -1.26
NPLOC4-210ENST00000572824 C6orf141Q5SZD1 244 aa7.16□□□□□ -1.26
NPLOC4-210ENST00000572824 AHSA2Q719I0 299 aa7.16□□□□□ -1.26
NPLOC4-210ENST00000572824 FOXRED2Q8IWF2 684 aa7.16□□□□□ -1.26
NPLOC4-210ENST00000572824 GAPTQ8N292 157 aa7.16□□□□□ -1.26
NPLOC4-210ENST00000572824 OR10A7Q8NGE5 316 aa7.16□□□□□ -1.26
NPLOC4-210ENST00000572824 OR51D1Q8NGF3 324 aa7.16□□□□□ -1.26
NPLOC4-210ENST00000572824 OR2T10Q8NGZ9 312 aa7.16□□□□□ -1.26
NPLOC4-210ENST00000572824 MRPL48Q96GC5 212 aaKnown RBP7.16□□□□□ -1.26
NPLOC4-210ENST00000572824 KCTD7Q96MP8 289 aa7.16□□□□□ -1.26
NPLOC4-210ENST00000572824 RDH12Q96NR8 316 aa7.16□□□□□ -1.26
NPLOC4-210ENST00000572824 HDHD3Q9BSH5 251 aaPredicted RBP7.16□□□□□ -1.26
NPLOC4-210ENST00000572824 TAF9BQ9HBM6 251 aa7.16□□□□□ -1.26
NPLOC4-210ENST00000572824 PARP11Q9NR21 331 aa7.16□□□□□ -1.26
NPLOC4-210ENST00000572824 PCDHB16Q9NRJ7 776 aa7.16□□□□□ -1.26
NPLOC4-210ENST00000572824 ZKSCAN7Q9P0L1 754 aaPredicted RBP7.16□□□□□ -1.26
NPLOC4-210ENST00000572824 TRAPPC2LQ9UL33 140 aa7.16□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms