RNA–Protein interactions for RNA: ENST00000572809.1

NUP88-205, Transcript of nucleoporin 88, humanhuman

TSL 3

Gene NUP88, Length 771 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP88-205ENST00000572809 CITED2Q99967 270 aaPredicted RBP5.92□□□□□ -1.46
NUP88-205ENST00000572809 ANKRD60Q9BZ19 345 aa5.92□□□□□ -1.46
NUP88-205ENST00000572809 CCDC90BQ9GZT6 254 aa5.92□□□□□ -1.46
NUP88-205ENST00000572809 CST11Q9H112 138 aa5.92□□□□□ -1.46
NUP88-205ENST00000572809 RAB9BQ9NP90 201 aa5.92□□□□□ -1.46
NUP88-205ENST00000572809 ISYNA1Q9NPH2 558 aa5.92□□□□□ -1.46
NUP88-205ENST00000572809 TET2Q6N021 2002 aaPredicted RBP5.92□□□□□ -1.46
NUP88-205ENST00000572809 ERICH4A6NGS2 130 aa5.91□□□□□ -1.46
NUP88-205ENST00000572809 C12orf77C9JDV5 145 aa5.91□□□□□ -1.46
NUP88-205ENST00000572809 CCRL2O00421 344 aa5.91□□□□□ -1.46
NUP88-205ENST00000572809 SC5DO75845 299 aa5.91□□□□□ -1.46
NUP88-205ENST00000572809 HBZP02008 142 aa5.91□□□□□ -1.46
NUP88-205ENST00000572809 OPN1MWP04001 364 aa5.91□□□□□ -1.46
NUP88-205ENST00000572809 SNRNP70P08621 437 aaKnown RBP5.91□□□□□ -1.46
NUP88-205ENST00000572809 OPN1MW2P0DN77 364 aa5.91□□□□□ -1.46
NUP88-205ENST00000572809 OPN1MW3P0DN78 364 aa5.91□□□□□ -1.46
NUP88-205ENST00000572809 CD37P11049 281 aa5.91□□□□□ -1.46
NUP88-205ENST00000572809 RCC1P18754 421 aaPredicted RBP5.91□□□□□ -1.46
NUP88-205ENST00000572809 CRHBPP24387 322 aa5.91□□□□□ -1.46
NUP88-205ENST00000572809 HTR2CP28335 458 aa5.91□□□□□ -1.46
NUP88-205ENST00000572809 ZNF816Q0VGE8 651 aaPredicted RBP5.91□□□□□ -1.46
NUP88-205ENST00000572809 TPBGQ13641 420 aa5.91□□□□□ -1.46
NUP88-205ENST00000572809 HNF4GQ14541 408 aa5.91□□□□□ -1.46
NUP88-205ENST00000572809 TRAM1Q15629 374 aa5.91□□□□□ -1.46
NUP88-205ENST00000572809 TMEM95Q3KNT9 176 aa5.91□□□□□ -1.46
NUP88-205ENST00000572809 Q3ZCU0 254 aa5.91□□□□□ -1.46
NUP88-205ENST00000572809 PDLIM3Q53GG5 364 aaPredicted RBP5.91□□□□□ -1.46
NUP88-205ENST00000572809 C9orf152Q5JTZ5 239 aa5.91□□□□□ -1.46
NUP88-205ENST00000572809 C1orf100Q5SVJ3 147 aa5.91□□□□□ -1.46
NUP88-205ENST00000572809 C6orf183Q5T699 404 aa5.91□□□□□ -1.46
NUP88-205ENST00000572809 SIGIRRQ6IA17 410 aa5.91□□□□□ -1.46
NUP88-205ENST00000572809 TRAT1Q6PIZ9 186 aa5.91□□□□□ -1.46
NUP88-205ENST00000572809 PRSS48Q7RTY5 328 aa5.91□□□□□ -1.46
NUP88-205ENST00000572809 MOB3BQ86TA1 216 aa5.91□□□□□ -1.46
NUP88-205ENST00000572809 NDUFA11Q86Y39 141 aa5.91□□□□□ -1.46
NUP88-205ENST00000572809 GAPTQ8N292 157 aa5.91□□□□□ -1.46
NUP88-205ENST00000572809 LINC00311Q8N616 119 aa5.91□□□□□ -1.46
NUP88-205ENST00000572809 C8orf31Q8N9H6 132 aa5.91□□□□□ -1.46
NUP88-205ENST00000572809 OR56B4Q8NH76 319 aa5.91□□□□□ -1.46
NUP88-205ENST00000572809 KCNG3Q8TAE7 436 aa5.91□□□□□ -1.46
NUP88-205ENST00000572809 UFD1Q92890 307 aa5.91□□□□□ -1.46
NUP88-205ENST00000572809 FAM46BQ96A09 425 aa5.91□□□□□ -1.46
NUP88-205ENST00000572809 NEDD4LQ96PU5 975 aa5.91□□□□□ -1.46
NUP88-205ENST00000572809 ARPC5LQ9BPX5 153 aa5.91□□□□□ -1.46
NUP88-205ENST00000572809 KCNIP1Q9NZI2 227 aa5.91□□□□□ -1.46
NUP88-205ENST00000572809 WNK1Q9H4A3 2382 aa5.91□□□□□ -1.46
NUP88-205ENST00000572809 IGHV1-3A0A0C4DH29 117 aa5.9□□□□□ -1.46
NUP88-205ENST00000572809 A0A1W2PPI3 338 aa5.9□□□□□ -1.46
NUP88-205ENST00000572809 TCRBV4S1A1TA0A5B7 111 aa5.9□□□□□ -1.46
NUP88-205ENST00000572809 SH2D7A6NKC9 451 aaPredicted RBP5.9□□□□□ -1.46
NUP88-205ENST00000572809 HSD17B6O14756 317 aa5.9□□□□□ -1.46
NUP88-205ENST00000572809 SLC22A1O15245 554 aa5.9□□□□□ -1.46
NUP88-205ENST00000572809 PDCD6O75340 191 aa5.9□□□□□ -1.46
NUP88-205ENST00000572809 ARL6IP5O75915 188 aa5.9□□□□□ -1.46
NUP88-205ENST00000572809 IGKV1D-33P01593 117 aa5.9□□□□□ -1.46
NUP88-205ENST00000572809 IGKV1-33P01594 117 aa5.9□□□□□ -1.46
NUP88-205ENST00000572809 UCHL1P09936 223 aa5.9□□□□□ -1.46
NUP88-205ENST00000572809 TMEM11P17152 192 aa5.9□□□□□ -1.46
NUP88-205ENST00000572809 IL3RAP26951 378 aa5.9□□□□□ -1.46
NUP88-205ENST00000572809 REG1BP48304 166 aa5.9□□□□□ -1.46
NUP88-205ENST00000572809 HSPA13P48723 471 aa5.9□□□□□ -1.46
NUP88-205ENST00000572809 ZNF134P52741 427 aa5.9□□□□□ -1.46
NUP88-205ENST00000572809 RPS27AP62979 156 aaKnown RBP5.9□□□□□ -1.46
NUP88-205ENST00000572809 MLLT11Q13015 90 aaPredicted RBP5.9□□□□□ -1.46
NUP88-205ENST00000572809 EBI3Q14213 229 aa5.9□□□□□ -1.46
NUP88-205ENST00000572809 TMEM30BQ3MIR4 351 aa5.9□□□□□ -1.46
NUP88-205ENST00000572809 MORN2Q502X0 79 aa5.9□□□□□ -1.46
NUP88-205ENST00000572809 KHDC1LQ5JSQ8 128 aa5.9□□□□□ -1.46
NUP88-205ENST00000572809 OR10K2Q6IF99 312 aa5.9□□□□□ -1.46
NUP88-205ENST00000572809 FAM53AQ6NSI3 398 aaPredicted RBP5.9□□□□□ -1.46
NUP88-205ENST00000572809 IZUMO2Q6UXV1 221 aa5.9□□□□□ -1.46
NUP88-205ENST00000572809 TMEM91Q6ZNR0 172 aa5.9□□□□□ -1.46
NUP88-205ENST00000572809 SLC25A48Q6ZT89 311 aaKnown RBP5.9□□□□□ -1.46
NUP88-205ENST00000572809 OR4F17Q8NGA8 305 aa5.9□□□□□ -1.46
NUP88-205ENST00000572809 OR1L1Q8NH94 360 aa5.9□□□□□ -1.46
NUP88-205ENST00000572809 RAB24Q969Q5 203 aa5.9□□□□□ -1.46
NUP88-205ENST00000572809 ST6GALNAC6Q969X2 333 aa5.9□□□□□ -1.46
NUP88-205ENST00000572809 R3HDM4Q96D70 268 aa5.9□□□□□ -1.46
NUP88-205ENST00000572809 CNBD2Q96M20 576 aa5.9□□□□□ -1.46
NUP88-205ENST00000572809 OR4F4Q96R69 305 aa5.9□□□□□ -1.46
NUP88-205ENST00000572809 MGLLQ99685 303 aa5.9□□□□□ -1.46
NUP88-205ENST00000572809 FAAP24Q9BTP7 215 aa5.9□□□□□ -1.46
NUP88-205ENST00000572809 TAF9BQ9HBM6 251 aa5.9□□□□□ -1.46
NUP88-205ENST00000572809 OR2S2Q9NQN1 319 aa5.9□□□□□ -1.46
NUP88-205ENST00000572809 GNG12Q9UBI6 72 aa5.9□□□□□ -1.46
NUP88-205ENST00000572809 MOB4Q9Y3A3 225 aa5.9□□□□□ -1.46
NUP88-205ENST00000572809 AK6Q9Y3D8 172 aaKnown RBP5.9□□□□□ -1.46
NUP88-205ENST00000572809 LRRC42Q9Y546 428 aa5.9□□□□□ -1.46
NUP88-205ENST00000572809 MEGF8Q7Z7M0 2845 aa5.9□□□□□ -1.47
NUP88-205ENST00000572809 IGHV3-72A0A0B4J1Y9 119 aa5.89□□□□□ -1.47
NUP88-205ENST00000572809 NCBP2LA6PVI3 153 aaKnown RBP5.89□□□□□ -1.47
NUP88-205ENST00000572809 SLC31A2O15432 143 aa5.89□□□□□ -1.47
NUP88-205ENST00000572809 FGF16O43320 207 aa5.89□□□□□ -1.47
NUP88-205ENST00000572809 ARSBP15848 533 aa5.89□□□□□ -1.47
NUP88-205ENST00000572809 PSMA1P25786 263 aaKnown RBP5.89□□□□□ -1.47
NUP88-205ENST00000572809 CHATP28329 748 aa5.89□□□□□ -1.47
NUP88-205ENST00000572809 CD1BP29016 333 aa5.89□□□□□ -1.47
NUP88-205ENST00000572809 BLVRBP30043 206 aaPredicted RBP5.89□□□□□ -1.47
NUP88-205ENST00000572809 MAP2K4P45985 399 aa5.89□□□□□ -1.47
NUP88-205ENST00000572809 RPS25P62851 125 aaKnown RBP5.89□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms