RNA–Protein interactions for RNA: ENST00000572579.1

CHD3-214, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 2

Gene CHD3, Length 931 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-214ENST00000572579 ZNF251Q9BRH9 671 aa14.14□□□□□ -0.15
CHD3-214ENST00000572579 ABHD14AQ9BUJ0 271 aa14.14□□□□□ -0.15
CHD3-214ENST00000572579 TMED9Q9BVK6 235 aa14.14□□□□□ -0.15
CHD3-214ENST00000572579 PARP12Q9H0J9 701 aaKnown RBP14.14□□□□□ -0.15
CHD3-214ENST00000572579 GHRLQ9UBU3 117 aa14.14□□□□□ -0.15
CHD3-214ENST00000572579 HUWE1Q7Z6Z7 4374 aaKnown RBP14.13□□□□□ -0.15
CHD3-214ENST00000572579 TXNL1O43396 289 aa14.13□□□□□ -0.15
CHD3-214ENST00000572579 YPEL1O60688 119 aa14.13□□□□□ -0.15
CHD3-214ENST00000572579 ELANEP08246 267 aa14.13□□□□□ -0.15
CHD3-214ENST00000572579 PPIFP30405 207 aaKnown RBP14.13□□□□□ -0.15
CHD3-214ENST00000572579 LUMP51884 338 aaPredicted RBP14.13□□□□□ -0.15
CHD3-214ENST00000572579 ACTBP60709 375 aa14.13□□□□□ -0.15
CHD3-214ENST00000572579 RPS27AP62979 156 aaKnown RBP14.13□□□□□ -0.15
CHD3-214ENST00000572579 TRAT1Q6PIZ9 186 aa14.13□□□□□ -0.15
CHD3-214ENST00000572579 TMEM91Q6ZNR0 172 aa14.13□□□□□ -0.15
CHD3-214ENST00000572579 ZNF833PQ6ZTB9 187 aa14.13□□□□□ -0.15
CHD3-214ENST00000572579 CEACAM19Q7Z692 300 aa14.13□□□□□ -0.15
CHD3-214ENST00000572579 ZNF554Q86TJ5 538 aa14.13□□□□□ -0.15
CHD3-214ENST00000572579 YPEL2Q96QA6 119 aa14.13□□□□□ -0.15
CHD3-214ENST00000572579 TM2D1Q9BX74 207 aa14.13□□□□□ -0.15
CHD3-214ENST00000572579 IFI27L2Q9H2X8 130 aa14.13□□□□□ -0.15
CHD3-214ENST00000572579 SCOCQ9UIL1 159 aa14.13□□□□□ -0.15
CHD3-214ENST00000572579 JPT1Q9UK76 154 aa14.13□□□□□ -0.15
CHD3-214ENST00000572579 IGHV7-81A0A0B4J1V7 117 aa14.12□□□□□ -0.15
CHD3-214ENST00000572579 TMEM14DPA8MWL7 114 aa14.12□□□□□ -0.15
CHD3-214ENST00000572579 SLC22A1O15245 554 aa14.12□□□□□ -0.15
CHD3-214ENST00000572579 NAPSAO96009 420 aa14.12□□□□□ -0.15
CHD3-214ENST00000572579 SRMP19623 302 aa14.12□□□□□ -0.15
CHD3-214ENST00000572579 MYF6P23409 242 aa14.12□□□□□ -0.15
CHD3-214ENST00000572579 MAPK3P27361 379 aaPredicted RBP14.12□□□□□ -0.15
CHD3-214ENST00000572579 SPHARQ15513 63 aa14.12□□□□□ -0.15
CHD3-214ENST00000572579 CXorf66Q5JRM2 361 aaPredicted RBP14.12□□□□□ -0.15
CHD3-214ENST00000572579 LY6G6FQ5SQ64 297 aa14.12□□□□□ -0.15
CHD3-214ENST00000572579 VAX1Q5SQQ9 334 aa14.12□□□□□ -0.15
CHD3-214ENST00000572579 ASPHD1Q5U4P2 390 aa14.12□□□□□ -0.15
CHD3-214ENST00000572579 ZNF880Q6PDB4 577 aa14.12□□□□□ -0.15
CHD3-214ENST00000572579 MS4A15Q8N5U1 240 aa14.12□□□□□ -0.15
CHD3-214ENST00000572579 PHYHIPQ92561 330 aa14.12□□□□□ -0.15
CHD3-214ENST00000572579 KCNIP1Q9NZI2 227 aa14.12□□□□□ -0.15
CHD3-214ENST00000572579 WSB1Q9Y6I7 421 aa14.12□□□□□ -0.15
CHD3-214ENST00000572579 SAA2-SAA4A0A096LPE2 208 aa14.11□□□□□ -0.15
CHD3-214ENST00000572579 UCHL1P09936 223 aa14.11□□□□□ -0.15
CHD3-214ENST00000572579 SAA2P0DJI9 122 aaPredicted RBP14.11□□□□□ -0.15
CHD3-214ENST00000572579 MMDQ15546 238 aa14.11□□□□□ -0.15
CHD3-214ENST00000572579 SVOPQ8N4V2 548 aa14.11□□□□□ -0.15
CHD3-214ENST00000572579 TMEM203Q969S6 136 aa14.11□□□□□ -0.15
CHD3-214ENST00000572579 HDHD3Q9BSH5 251 aaPredicted RBP14.11□□□□□ -0.15
CHD3-214ENST00000572579 MCRIP2Q9BUT9 160 aaKnown RBP14.11□□□□□ -0.15
CHD3-214ENST00000572579 ANKRD60Q9BZ19 345 aa14.11□□□□□ -0.15
CHD3-214ENST00000572579 CST11Q9H112 138 aa14.11□□□□□ -0.15
CHD3-214ENST00000572579 GNB4Q9HAV0 340 aa14.11□□□□□ -0.15
CHD3-214ENST00000572579 RAB9BQ9NP90 201 aa14.11□□□□□ -0.15
CHD3-214ENST00000572579 ZNF580Q9UK33 172 aa14.11□□□□□ -0.15
CHD3-214ENST00000572579 TENM3Q9P273 2699 aa14.1□□□□□ -0.15
CHD3-214ENST00000572579 FOXI3A8MTJ6 420 aaPredicted RBP14.1□□□□□ -0.15
CHD3-214ENST00000572579 ST8SIA5O15466 376 aa14.1□□□□□ -0.15
CHD3-214ENST00000572579 SOCS1O15524 211 aa14.1□□□□□ -0.15
CHD3-214ENST00000572579 PROP1O75360 226 aa14.1□□□□□ -0.15
CHD3-214ENST00000572579 UBBP0CG47 229 aa14.1□□□□□ -0.15
CHD3-214ENST00000572579 CT45A6P0DMU7 189 aa14.1□□□□□ -0.15
CHD3-214ENST00000572579 CT45A5P0DMU8 189 aa14.1□□□□□ -0.15
CHD3-214ENST00000572579 CT45A7P0DMV0 189 aa14.1□□□□□ -0.15
CHD3-214ENST00000572579 RAB25P57735 213 aa14.1□□□□□ -0.15
CHD3-214ENST00000572579 NDPQ00604 133 aa14.1□□□□□ -0.15
CHD3-214ENST00000572579 FHL3Q13643 280 aa14.1□□□□□ -0.15
CHD3-214ENST00000572579 RBM48Q5RL73 367 aaKnown RBP14.1□□□□□ -0.15
CHD3-214ENST00000572579 GLT8D1Q68CQ7 371 aa14.1□□□□□ -0.15
CHD3-214ENST00000572579 NPBQ8NG41 125 aa14.1□□□□□ -0.15
CHD3-214ENST00000572579 GALMQ96C23 342 aa14.1□□□□□ -0.15
CHD3-214ENST00000572579 NEDD4LQ96PU5 975 aa14.1□□□□□ -0.15
CHD3-214ENST00000572579 AGMATQ9BSE5 352 aa14.1□□□□□ -0.15
CHD3-214ENST00000572579 MND1Q9BWT6 205 aa14.1□□□□□ -0.15
CHD3-214ENST00000572579 GON7Q9BXV9 100 aa14.1□□□□□ -0.15
CHD3-214ENST00000572579 LPAR5Q9H1C0 372 aa14.1□□□□□ -0.15
CHD3-214ENST00000572579 FBXO7Q9Y3I1 522 aa14.1□□□□□ -0.15
CHD3-214ENST00000572579 ATP6V0E1O15342 81 aa14.09□□□□□ -0.15
CHD3-214ENST00000572579 IGLV1-40P01703 118 aa14.09□□□□□ -0.15
CHD3-214ENST00000572579 VDAC1P21796 283 aa14.09□□□□□ -0.15
CHD3-214ENST00000572579 TMEM50BP56557 158 aa14.09□□□□□ -0.15
CHD3-214ENST00000572579 P2RY14Q15391 338 aa14.09□□□□□ -0.15
CHD3-214ENST00000572579 HSD17B12Q53GQ0 312 aa14.09□□□□□ -0.15
CHD3-214ENST00000572579 RPL39P5Q59GN2 51 aa14.09□□□□□ -0.15
CHD3-214ENST00000572579 C19orf54Q5BKX5 351 aa14.09□□□□□ -0.15
CHD3-214ENST00000572579 LIPKQ5VXJ0 399 aa14.09□□□□□ -0.15
CHD3-214ENST00000572579 FAM89BQ8N5H3 189 aa14.09□□□□□ -0.15
CHD3-214ENST00000572579 OR8U1Q8NH10 309 aa14.09□□□□□ -0.15
CHD3-214ENST00000572579 C4orf3Q8WVX3 66 aa14.09□□□□□ -0.15
CHD3-214ENST00000572579 THRSPQ92748 146 aa14.09□□□□□ -0.15
CHD3-214ENST00000572579 B9D2Q9BPU9 175 aa14.09□□□□□ -0.15
CHD3-214ENST00000572579 TMEM59Q9BXS4 323 aa14.09□□□□□ -0.15
CHD3-214ENST00000572579 GPR61Q9BZJ8 451 aa14.09□□□□□ -0.15
CHD3-214ENST00000572579 OR51J1Q9H342 316 aa14.09□□□□□ -0.15
CHD3-214ENST00000572579 DUSP21Q9H596 190 aa14.09□□□□□ -0.15
CHD3-214ENST00000572579 LSM4Q9Y4Z0 139 aaKnown RBP14.09□□□□□ -0.15
CHD3-214ENST00000572579 I3L521 148 aa14.08□□□□□ -0.16
CHD3-214ENST00000572579 FCN1O00602 326 aa14.08□□□□□ -0.16
CHD3-214ENST00000572579 RRP9O43818 475 aaKnown RBP14.08□□□□□ -0.16
CHD3-214ENST00000572579 SOX15O60248 233 aa14.08□□□□□ -0.16
CHD3-214ENST00000572579 HLA-DRB1P01911 266 aa14.08□□□□□ -0.16
CHD3-214ENST00000572579 EGR2P11161 476 aaPredicted RBP14.08□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms