RNA–Protein interactions for RNA: ENST00000572205.5

SMG6-210, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 4

Gene SMG6, Length 551 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-210ENST00000572205 AP5S1Q9NUS5 200 aa6.91□□□□□ -1.3
SMG6-210ENST00000572205 STEAP1Q9UHE8 339 aa6.91□□□□□ -1.3
SMG6-210ENST00000572205 AK3Q9UIJ7 227 aa6.91□□□□□ -1.3
SMG6-210ENST00000572205 HSF4Q9ULV5 492 aa6.91□□□□□ -1.3
SMG6-210ENST00000572205 STUB1Q9UNE7 303 aa6.91□□□□□ -1.3
SMG6-210ENST00000572205 V9GY05 133 aa6.91□□□□□ -1.3
SMG6-210ENST00000572205 BTBD17A6NE02 478 aa6.9□□□□□ -1.3
SMG6-210ENST00000572205 SH2D7A6NKC9 451 aaPredicted RBP6.9□□□□□ -1.3
SMG6-210ENST00000572205 ZNF736B4DX44 427 aaPredicted RBP6.9□□□□□ -1.3
SMG6-210ENST00000572205 MCRIP1C9JLW8 97 aa6.9□□□□□ -1.3
SMG6-210ENST00000572205 SDCBPO00560 298 aaPredicted RBP6.9□□□□□ -1.3
SMG6-210ENST00000572205 HSD17B6O14756 317 aa6.9□□□□□ -1.3
SMG6-210ENST00000572205 PROP1O75360 226 aa6.9□□□□□ -1.3
SMG6-210ENST00000572205 OR2F2O95006 317 aa6.9□□□□□ -1.3
SMG6-210ENST00000572205 TSPAN15O95858 294 aa6.9□□□□□ -1.3
SMG6-210ENST00000572205 CLEC2LP0C7M8 214 aa6.9□□□□□ -1.3
SMG6-210ENST00000572205 GZMHP20718 246 aa6.9□□□□□ -1.3
SMG6-210ENST00000572205 HTD2P86397 168 aa6.9□□□□□ -1.3
SMG6-210ENST00000572205 RBM39Q14498 530 aaKnown RBP6.9□□□□□ -1.3
SMG6-210ENST00000572205 C2orf76Q3KRA6 126 aa6.9□□□□□ -1.3
SMG6-210ENST00000572205 TMEM30BQ3MIR4 351 aa6.9□□□□□ -1.3
SMG6-210ENST00000572205 TCTEX1D4Q5JR98 221 aa6.9□□□□□ -1.3
SMG6-210ENST00000572205 NKAPLQ5M9Q1 402 aa6.9□□□□□ -1.3
SMG6-210ENST00000572205 C6orf183Q5T699 404 aa6.9□□□□□ -1.3
SMG6-210ENST00000572205 MFSD4AQ8N468 514 aa6.9□□□□□ -1.3
SMG6-210ENST00000572205 DRAM1Q8N682 238 aa6.9□□□□□ -1.3
SMG6-210ENST00000572205 KLHDC1Q8N7A1 406 aa6.9□□□□□ -1.3
SMG6-210ENST00000572205 OR10V1Q8NGI7 309 aa6.9□□□□□ -1.3
SMG6-210ENST00000572205 RTN4IP1Q8WWV3 396 aaPredicted RBP6.9□□□□□ -1.3
SMG6-210ENST00000572205 C5orf30Q96GV9 206 aa6.9□□□□□ -1.3
SMG6-210ENST00000572205 RBM14Q96PK6 669 aaKnown RBP6.9□□□□□ -1.3
SMG6-210ENST00000572205 AGMATQ9BSE5 352 aa6.9□□□□□ -1.3
SMG6-210ENST00000572205 CENPOQ9BU64 300 aa6.9□□□□□ -1.3
SMG6-210ENST00000572205 PECRQ9BY49 303 aa6.9□□□□□ -1.3
SMG6-210ENST00000572205 PCDHB16Q9NRJ7 776 aa6.9□□□□□ -1.3
SMG6-210ENST00000572205 PLSCR3Q9NRY6 295 aa6.9□□□□□ -1.3
SMG6-210ENST00000572205 JPT1Q9UK76 154 aa6.9□□□□□ -1.3
SMG6-210ENST00000572205 ELF5Q9UKW6 265 aaPredicted RBP6.9□□□□□ -1.3
SMG6-210ENST00000572205 U3KQE9 123 aa6.9□□□□□ -1.3
SMG6-210ENST00000572205 COL7A1Q02388 2944 aa6.89□□□□□ -1.31
SMG6-210ENST00000572205 IGKV1D-8A0A087WSZ0 117 aa6.89□□□□□ -1.31
SMG6-210ENST00000572205 IGHV1-3A0A0C4DH29 117 aa6.89□□□□□ -1.31
SMG6-210ENST00000572205 SNRNP70P08621 437 aaKnown RBP6.89□□□□□ -1.31
SMG6-210ENST00000572205 RAB3BP20337 219 aa6.89□□□□□ -1.31
SMG6-210ENST00000572205 BLVRBP30043 206 aaPredicted RBP6.89□□□□□ -1.31
SMG6-210ENST00000572205 PPP1CCP36873 323 aaKnown RBP6.89□□□□□ -1.31
SMG6-210ENST00000572205 HLA-DRB3P79483 266 aa6.89□□□□□ -1.31
SMG6-210ENST00000572205 LSAMPQ13449 338 aa6.89□□□□□ -1.31
SMG6-210ENST00000572205 MADCAM1Q13477 382 aa6.89□□□□□ -1.31
SMG6-210ENST00000572205 NEDD8Q15843 81 aa6.89□□□□□ -1.31
SMG6-210ENST00000572205 MORN2Q502X0 79 aa6.89□□□□□ -1.31
SMG6-210ENST00000572205 C11orf88Q6PI97 169 aa6.89□□□□□ -1.31
SMG6-210ENST00000572205 TRAT1Q6PIZ9 186 aa6.89□□□□□ -1.31
SMG6-210ENST00000572205 C10orf99Q6UWK7 81 aa6.89□□□□□ -1.31
SMG6-210ENST00000572205 ZNF833PQ6ZTB9 187 aa6.89□□□□□ -1.31
SMG6-210ENST00000572205 C16orf82Q7Z2V1 217 aa6.89□□□□□ -1.31
SMG6-210ENST00000572205 OR8H3Q8N146 312 aa6.89□□□□□ -1.31
SMG6-210ENST00000572205 C5orf56Q8N8D9 126 aa6.89□□□□□ -1.31
SMG6-210ENST00000572205 OR52L2PQ8NGH6 319 aa6.89□□□□□ -1.31
SMG6-210ENST00000572205 OR4C13Q8NGP0 309 aa6.89□□□□□ -1.31
SMG6-210ENST00000572205 NEK7Q8TDX7 302 aa6.89□□□□□ -1.31
SMG6-210ENST00000572205 TOMM40LQ969M1 308 aa6.89□□□□□ -1.31
SMG6-210ENST00000572205 PTX4Q96A99 478 aa6.89□□□□□ -1.31
SMG6-210ENST00000572205 SLC25A33Q9BSK2 321 aa6.89□□□□□ -1.31
SMG6-210ENST00000572205 NPFFR1Q9GZQ6 430 aa6.89□□□□□ -1.31
SMG6-210ENST00000572205 TOLLIPQ9H0E2 274 aa6.89□□□□□ -1.31
SMG6-210ENST00000572205 PLGRKTQ9HBL7 147 aa6.89□□□□□ -1.31
SMG6-210ENST00000572205 Q9N2K0 584 aa6.89□□□□□ -1.31
SMG6-210ENST00000572205 RAB18Q9NP72 206 aa6.89□□□□□ -1.31
SMG6-210ENST00000572205 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP6.89□□□□□ -1.31
SMG6-210ENST00000572205 OR1A1Q9P1Q5 309 aa6.89□□□□□ -1.31
SMG6-210ENST00000572205 SAA2-SAA4A0A096LPE2 208 aa6.88□□□□□ -1.31
SMG6-210ENST00000572205 NOTOA8MTQ0 251 aa6.88□□□□□ -1.31
SMG6-210ENST00000572205 CRYBA1P05813 215 aa6.88□□□□□ -1.31
SMG6-210ENST00000572205 FCGR3AP08637 254 aa6.88□□□□□ -1.31
SMG6-210ENST00000572205 SAA2P0DJI9 122 aaPredicted RBP6.88□□□□□ -1.31
SMG6-210ENST00000572205 HIST1H1DP16402 221 aaKnown RBP6.88□□□□□ -1.31
SMG6-210ENST00000572205 SDC2P34741 201 aa6.88□□□□□ -1.31
SMG6-210ENST00000572205 CEACAM3P40198 252 aa6.88□□□□□ -1.31
SMG6-210ENST00000572205 REG1BP48304 166 aa6.88□□□□□ -1.31
SMG6-210ENST00000572205 VEGFCP49767 419 aa6.88□□□□□ -1.31
SMG6-210ENST00000572205 RAB7AP51149 207 aa6.88□□□□□ -1.31
SMG6-210ENST00000572205 PRRX1P54821 245 aa6.88□□□□□ -1.31
SMG6-210ENST00000572205 LCE2CQ5TA81 110 aa6.88□□□□□ -1.31
SMG6-210ENST00000572205 SFXN4Q6P4A7 337 aa6.88□□□□□ -1.31
SMG6-210ENST00000572205 MOB1BQ7L9L4 216 aa6.88□□□□□ -1.31
SMG6-210ENST00000572205 FAM71E2Q8N5Q1 922 aa6.88□□□□□ -1.31
SMG6-210ENST00000572205 ZBTB34Q8NCN2 500 aa6.88□□□□□ -1.31
SMG6-210ENST00000572205 SGMS2Q8NHU3 365 aa6.88□□□□□ -1.31
SMG6-210ENST00000572205 LGALS14Q8TCE9 139 aa6.88□□□□□ -1.31
SMG6-210ENST00000572205 CREB3L1Q96BA8 519 aa6.88□□□□□ -1.31
SMG6-210ENST00000572205 CABLES2Q9BTV7 478 aa6.88□□□□□ -1.31
SMG6-210ENST00000572205 ABHD14AQ9BUJ0 271 aa6.88□□□□□ -1.31
SMG6-210ENST00000572205 C12orf4Q9NQ89 552 aa6.88□□□□□ -1.31
SMG6-210ENST00000572205 PITPNC1Q9UKF7 332 aa6.88□□□□□ -1.31
SMG6-210ENST00000572205 TRAPPC2LQ9UL33 140 aa6.88□□□□□ -1.31
SMG6-210ENST00000572205 AMMECR1Q9Y4X0 333 aaPredicted RBP6.88□□□□□ -1.31
SMG6-210ENST00000572205 DNAH9Q9NYC9 4486 aa6.88□□□□□ -1.31
SMG6-210ENST00000572205 IGHV3-72A0A0B4J1Y9 119 aa6.87□□□□□ -1.31
SMG6-210ENST00000572205 ITGB1BP1O14713 200 aa6.87□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms