RNA–Protein interactions for RNA: ENST00000572083.5

CCDC40-206, Transcript of coiled-coil domain containing 40, humanhuman

TSL 2

Gene CCDC40, Length 816 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-206ENST00000572083 CD2P06729 351 aa15.18■□□□□ 0.02
CCDC40-206ENST00000572083 EGR2P11161 476 aaPredicted RBP15.18■□□□□ 0.02
CCDC40-206ENST00000572083 GTF2F2P13984 249 aa15.18■□□□□ 0.02
CCDC40-206ENST00000572083 SNRPGP62308 76 aaKnown RBP15.18■□□□□ 0.02
CCDC40-206ENST00000572083 PPP3R1P63098 170 aa15.18■□□□□ 0.02
CCDC40-206ENST00000572083 PLGLAQ15195 96 aa15.18■□□□□ 0.02
CCDC40-206ENST00000572083 ACTBL2Q562R1 376 aa15.18■□□□□ 0.02
CCDC40-206ENST00000572083 SLC25A30Q5SVS4 291 aa15.18■□□□□ 0.02
CCDC40-206ENST00000572083 ZNF660Q6AZW8 331 aaPredicted RBP15.18■□□□□ 0.02
CCDC40-206ENST00000572083 PYHIN1Q6K0P9 492 aa15.18■□□□□ 0.02
CCDC40-206ENST00000572083 TMEM106AQ96A25 262 aa15.18■□□□□ 0.02
CCDC40-206ENST00000572083 TMED9Q9BVK6 235 aa15.18■□□□□ 0.02
CCDC40-206ENST00000572083 TUBA4BQ9H853 241 aa15.18■□□□□ 0.02
CCDC40-206ENST00000572083 TAF9BQ9HBM6 251 aa15.18■□□□□ 0.02
CCDC40-206ENST00000572083 TMEM138Q9NPI0 162 aa15.18■□□□□ 0.02
CCDC40-206ENST00000572083 ERVK13-1Q9NX77 482 aa15.18■□□□□ 0.02
CCDC40-206ENST00000572083 GAB2Q9UQC2 676 aa15.18■□□□□ 0.02
CCDC40-206ENST00000572083 NUBP2Q9Y5Y2 271 aa15.18■□□□□ 0.02
CCDC40-206ENST00000572083 SAA2-SAA4A0A096LPE2 208 aa15.17■□□□□ 0.02
CCDC40-206ENST00000572083 FCN1O00602 326 aa15.17■□□□□ 0.02
CCDC40-206ENST00000572083 SAA2P0DJI9 122 aaPredicted RBP15.17■□□□□ 0.02
CCDC40-206ENST00000572083 GBX2P52951 348 aaPredicted RBP15.17■□□□□ 0.02
CCDC40-206ENST00000572083 MRPL28Q13084 256 aaKnown RBP15.17■□□□□ 0.02
CCDC40-206ENST00000572083 RAB12Q6IQ22 244 aa15.17■□□□□ 0.02
CCDC40-206ENST00000572083 TRAT1Q6PIZ9 186 aa15.17■□□□□ 0.02
CCDC40-206ENST00000572083 FAM131AQ6UXB0 335 aa15.17■□□□□ 0.02
CCDC40-206ENST00000572083 ZNF833PQ6ZTB9 187 aa15.17■□□□□ 0.02
CCDC40-206ENST00000572083 GAPTQ8N292 157 aa15.17■□□□□ 0.02
CCDC40-206ENST00000572083 MYCBPQ99417 103 aaPredicted RBP15.17■□□□□ 0.02
CCDC40-206ENST00000572083 SPACA1Q9HBV2 294 aa15.17■□□□□ 0.02
CCDC40-206ENST00000572083 ZNF780AO75290 641 aaPredicted RBP15.16■□□□□ 0.02
CCDC40-206ENST00000572083 BDKRB2P30411 391 aa15.16■□□□□ 0.02
CCDC40-206ENST00000572083 TMEM267Q0VDI3 215 aaPredicted RBP15.16■□□□□ 0.02
CCDC40-206ENST00000572083 RAB40BQ12829 278 aa15.16■□□□□ 0.02
CCDC40-206ENST00000572083 UNQ5815/PRO19632Q6UWF5 114 aa15.16■□□□□ 0.02
CCDC40-206ENST00000572083 PPP1R27Q86WC6 154 aa15.16■□□□□ 0.02
CCDC40-206ENST00000572083 GPR148Q8TDV2 347 aa15.16■□□□□ 0.02
CCDC40-206ENST00000572083 RHOVQ96L33 236 aa15.16■□□□□ 0.02
CCDC40-206ENST00000572083 ZNF184Q99676 751 aaPredicted RBP15.16■□□□□ 0.02
CCDC40-206ENST00000572083 CNOT2Q9NZN8 540 aaKnown RBP15.16■□□□□ 0.02
CCDC40-206ENST00000572083 SNTNA6NMZ2 147 aa15.15■□□□□ 0.02
CCDC40-206ENST00000572083 RRHO14718 337 aa15.15■□□□□ 0.02
CCDC40-206ENST00000572083 TRGV3P03979 118 aa15.15■□□□□ 0.02
CCDC40-206ENST00000572083 FCGR1AP12314 374 aa15.15■□□□□ 0.02
CCDC40-206ENST00000572083 XAF1Q6GPH4 301 aa15.15■□□□□ 0.02
CCDC40-206ENST00000572083 CD200R1LQ6Q8B3 271 aa15.15■□□□□ 0.02
CCDC40-206ENST00000572083 GTSCR1Q86UQ5 136 aa15.15■□□□□ 0.02
CCDC40-206ENST00000572083 LFNGQ8NES3 379 aa15.15■□□□□ 0.02
CCDC40-206ENST00000572083 IL17DQ8TAD2 202 aa15.15■□□□□ 0.02
CCDC40-206ENST00000572083 MRPS24Q96EL2 167 aaKnown RBP15.15■□□□□ 0.02
CCDC40-206ENST00000572083 AMBNQ9NP70 447 aa15.15■□□□□ 0.02
CCDC40-206ENST00000572083 JPT1Q9UK76 154 aa15.15■□□□□ 0.02
CCDC40-206ENST00000572083 PEX16Q9Y5Y5 336 aa15.15■□□□□ 0.02
CCDC40-206ENST00000572083 UBE2QL1A1L167 161 aa15.14■□□□□ 0.01
CCDC40-206ENST00000572083 ARPC1BO15143 372 aaKnown RBP15.14■□□□□ 0.01
CCDC40-206ENST00000572083 RGS11O94810 467 aa15.14■□□□□ 0.01
CCDC40-206ENST00000572083 SNRPBP14678 240 aaKnown RBP15.14■□□□□ 0.01
CCDC40-206ENST00000572083 ZIK1Q3SY52 487 aaPredicted RBP15.14■□□□□ 0.01
CCDC40-206ENST00000572083 RDH12Q96NR8 316 aa15.14■□□□□ 0.01
CCDC40-206ENST00000572083 CLCC1Q96S66 551 aa15.14■□□□□ 0.01
CCDC40-206ENST00000572083 SLA2Q9H6Q3 261 aa15.14■□□□□ 0.01
CCDC40-206ENST00000572083 RNF150Q9ULK6 438 aa15.14■□□□□ 0.01
CCDC40-206ENST00000572083 H0Y980 276 aa15.13■□□□□ 0.01
CCDC40-206ENST00000572083 FADS2O95864 444 aaKnown RBP15.13■□□□□ 0.01
CCDC40-206ENST00000572083 MAS1P04201 325 aa15.13■□□□□ 0.01
CCDC40-206ENST00000572083 CD40LGP29965 261 aa15.13■□□□□ 0.01
CCDC40-206ENST00000572083 RIPK1Q13546 671 aa15.13■□□□□ 0.01
CCDC40-206ENST00000572083 AKIRIN2Q53H80 203 aa15.13■□□□□ 0.01
CCDC40-206ENST00000572083 GLDNQ6ZMI3 551 aaPredicted RBP15.13■□□□□ 0.01
CCDC40-206ENST00000572083 OR2AK2Q8NG84 335 aa15.13■□□□□ 0.01
CCDC40-206ENST00000572083 OR9G4Q8NGQ1 327 aa15.13■□□□□ 0.01
CCDC40-206ENST00000572083 CENPNQ96H22 339 aaPredicted RBP15.13■□□□□ 0.01
CCDC40-206ENST00000572083 THAP7Q9BT49 309 aaPredicted RBP15.13■□□□□ 0.01
CCDC40-206ENST00000572083 HIPK2Q9H2X6 1198 aa15.13■□□□□ 0.01
CCDC40-206ENST00000572083 RANGRFQ9HD47 186 aaPredicted RBP15.13■□□□□ 0.01
CCDC40-206ENST00000572083 MBNL3Q9NUK0 354 aaKnown RBP15.13■□□□□ 0.01
CCDC40-206ENST00000572083 KCNIP1Q9NZI2 227 aa15.13■□□□□ 0.01
CCDC40-206ENST00000572083 KMT2AQ03164 3969 aa15.12■□□□□ 0.01
CCDC40-206ENST00000572083 ANKRD34BA5PLL1 514 aa15.12■□□□□ 0.01
CCDC40-206ENST00000572083 SC5DO75845 299 aa15.12■□□□□ 0.01
CCDC40-206ENST00000572083 ALPLP05186 524 aa15.12■□□□□ 0.01
CCDC40-206ENST00000572083 ZP3P21754 424 aa15.12■□□□□ 0.01
CCDC40-206ENST00000572083 GPR176Q14439 515 aa15.12■□□□□ 0.01
CCDC40-206ENST00000572083 OR13C5Q8NGS8 318 aa15.12■□□□□ 0.01
CCDC40-206ENST00000572083 MRPL30Q8TCC3 161 aaKnown RBP15.12■□□□□ 0.01
CCDC40-206ENST00000572083 MUL1Q969V5 352 aa15.12■□□□□ 0.01
CCDC40-206ENST00000572083 IFI27L2Q9H2X8 130 aa15.12■□□□□ 0.01
CCDC40-206ENST00000572083 BANF2Q9H503 90 aa15.12■□□□□ 0.01
CCDC40-206ENST00000572083 ORC6Q9Y5N6 252 aa15.12■□□□□ 0.01
CCDC40-206ENST00000572083 CEPT1Q9Y6K0 416 aa15.12■□□□□ 0.01
CCDC40-206ENST00000572083 ST8SIA5O15466 376 aa15.11■□□□□ 0.01
CCDC40-206ENST00000572083 YPEL1O60688 119 aa15.11■□□□□ 0.01
CCDC40-206ENST00000572083 CA11O75493 328 aa15.11■□□□□ 0.01
CCDC40-206ENST00000572083 CA2P00918 260 aa15.11■□□□□ 0.01
CCDC40-206ENST00000572083 TFAP2AP05549 437 aa15.11■□□□□ 0.01
CCDC40-206ENST00000572083 GABRB1P18505 474 aa15.11■□□□□ 0.01
CCDC40-206ENST00000572083 SYNJ2BPP57105 145 aa15.11■□□□□ 0.01
CCDC40-206ENST00000572083 HTD2P86397 168 aa15.11■□□□□ 0.01
CCDC40-206ENST00000572083 RPL39P5Q59GN2 51 aa15.11■□□□□ 0.01
CCDC40-206ENST00000572083 GLIPR1L1Q6UWM5 242 aa15.11■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 57.6 ms