RNA–Protein interactions for RNA: ENST00000570385.1

CTDNEP1-203, Transcript of CTD nuclear envelope phosphatase 1, humanhuman

TSL 2

Gene CTDNEP1, Length 529 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1-203ENST00000570385 NABP2Q9BQ15 211 aa6.68□□□□□ -1.34
CTDNEP1-203ENST00000570385 RAB9BQ9NP90 201 aa6.68□□□□□ -1.34
CTDNEP1-203ENST00000570385 ISYNA1Q9NPH2 558 aa6.68□□□□□ -1.34
CTDNEP1-203ENST00000570385 CHCHD3Q9NX63 227 aaKnown RBP6.68□□□□□ -1.34
CTDNEP1-203ENST00000570385 SMPD3Q9NY59 655 aaPredicted RBP6.68□□□□□ -1.34
CTDNEP1-203ENST00000570385 KCNIP1Q9NZI2 227 aa6.68□□□□□ -1.34
CTDNEP1-203ENST00000570385 VSIG4Q9Y279 399 aa6.68□□□□□ -1.34
CTDNEP1-203ENST00000570385 FBXO7Q9Y3I1 522 aa6.68□□□□□ -1.34
CTDNEP1-203ENST00000570385 SMAD5-AS1Q9Y6J3 95 aa6.68□□□□□ -1.34
CTDNEP1-203ENST00000570385 TNCP24821 2201 aa6.68□□□□□ -1.34
CTDNEP1-203ENST00000570385 SAA2-SAA4A0A096LPE2 208 aa6.67□□□□□ -1.34
CTDNEP1-203ENST00000570385 A0A1W2PN81 502 aa6.67□□□□□ -1.34
CTDNEP1-203ENST00000570385 IRGMA1A4Y4 181 aa6.67□□□□□ -1.34
CTDNEP1-203ENST00000570385 OVOL1O14753 267 aa6.67□□□□□ -1.34
CTDNEP1-203ENST00000570385 NBR2O15453 112 aa6.67□□□□□ -1.34
CTDNEP1-203ENST00000570385 ST8SIA5O15466 376 aa6.67□□□□□ -1.34
CTDNEP1-203ENST00000570385 SOX15O60248 233 aa6.67□□□□□ -1.34
CTDNEP1-203ENST00000570385 IGHV3-11P01762 117 aa6.67□□□□□ -1.34
CTDNEP1-203ENST00000570385 HLA-DRB1P01911 266 aa6.67□□□□□ -1.34
CTDNEP1-203ENST00000570385 OR8U8P0C7N1 319 aa6.67□□□□□ -1.34
CTDNEP1-203ENST00000570385 SAA2P0DJI9 122 aaPredicted RBP6.67□□□□□ -1.34
CTDNEP1-203ENST00000570385 SPNP16150 400 aa6.67□□□□□ -1.34
CTDNEP1-203ENST00000570385 CELP19835 753 aa6.67□□□□□ -1.34
CTDNEP1-203ENST00000570385 FSTP19883 344 aa6.67□□□□□ -1.34
CTDNEP1-203ENST00000570385 CHRNA7P36544 502 aa6.67□□□□□ -1.34
CTDNEP1-203ENST00000570385 ST3GAL4Q11206 333 aa6.67□□□□□ -1.34
CTDNEP1-203ENST00000570385 RPL39P5Q59GN2 51 aa6.67□□□□□ -1.34
CTDNEP1-203ENST00000570385 FAM27D1Q5T7N8 215 aa6.67□□□□□ -1.34
CTDNEP1-203ENST00000570385 STEAP3Q658P3 488 aa6.67□□□□□ -1.34
CTDNEP1-203ENST00000570385 TRAT1Q6PIZ9 186 aa6.67□□□□□ -1.34
CTDNEP1-203ENST00000570385 FAM131AQ6UXB0 335 aa6.67□□□□□ -1.34
CTDNEP1-203ENST00000570385 GLDNQ6ZMI3 551 aaPredicted RBP6.67□□□□□ -1.34
CTDNEP1-203ENST00000570385 HAPLN4Q86UW8 402 aa6.67□□□□□ -1.34
CTDNEP1-203ENST00000570385 GAPTQ8N292 157 aa6.67□□□□□ -1.34
CTDNEP1-203ENST00000570385 ZNF485Q8NCK3 441 aa6.67□□□□□ -1.34
CTDNEP1-203ENST00000570385 SETD6Q8TBK2 473 aa6.67□□□□□ -1.34
CTDNEP1-203ENST00000570385 ABHD5Q8WTS1 349 aa6.67□□□□□ -1.34
CTDNEP1-203ENST00000570385 GGHQ92820 318 aa6.67□□□□□ -1.34
CTDNEP1-203ENST00000570385 DLX4Q92988 240 aaPredicted RBP6.67□□□□□ -1.34
CTDNEP1-203ENST00000570385 MRPS24Q96EL2 167 aaKnown RBP6.67□□□□□ -1.34
CTDNEP1-203ENST00000570385 RDH12Q96NR8 316 aa6.67□□□□□ -1.34
CTDNEP1-203ENST00000570385 DERL3Q96Q80 235 aa6.67□□□□□ -1.34
CTDNEP1-203ENST00000570385 CLCC1Q96S66 551 aa6.67□□□□□ -1.34
CTDNEP1-203ENST00000570385 FAAP24Q9BTP7 215 aa6.67□□□□□ -1.34
CTDNEP1-203ENST00000570385 PARP12Q9H0J9 701 aaKnown RBP6.67□□□□□ -1.34
CTDNEP1-203ENST00000570385 KCNK15Q9H427 330 aa6.67□□□□□ -1.34
CTDNEP1-203ENST00000570385 FBXL15Q9H469 300 aa6.67□□□□□ -1.34
CTDNEP1-203ENST00000570385 MBNL3Q9NUK0 354 aaKnown RBP6.67□□□□□ -1.34
CTDNEP1-203ENST00000570385 KIAA1456Q9P272 454 aa6.67□□□□□ -1.34
CTDNEP1-203ENST00000570385 IGHV4OR15-8A0A075B7B6 117 aa6.66□□□□□ -1.34
CTDNEP1-203ENST00000570385 A0A087WW49 117 aa6.66□□□□□ -1.34
CTDNEP1-203ENST00000570385 FAM90A10PA6NDY2 464 aa6.66□□□□□ -1.34
CTDNEP1-203ENST00000570385 TRIM64CA6NLI5 447 aa6.66□□□□□ -1.34
CTDNEP1-203ENST00000570385 C3orf84H3BNL1 204 aa6.66□□□□□ -1.34
CTDNEP1-203ENST00000570385 FCN1O00602 326 aa6.66□□□□□ -1.34
CTDNEP1-203ENST00000570385 YPEL1O60688 119 aa6.66□□□□□ -1.34
CTDNEP1-203ENST00000570385 PDCD6O75340 191 aa6.66□□□□□ -1.34
CTDNEP1-203ENST00000570385 CA11O75493 328 aa6.66□□□□□ -1.34
CTDNEP1-203ENST00000570385 SC5DO75845 299 aa6.66□□□□□ -1.34
CTDNEP1-203ENST00000570385 IGLV1-40P01703 118 aa6.66□□□□□ -1.34
CTDNEP1-203ENST00000570385 CHATP28329 748 aa6.66□□□□□ -1.34
CTDNEP1-203ENST00000570385 CX3CL1P78423 397 aa6.66□□□□□ -1.34
CTDNEP1-203ENST00000570385 MED21Q13503 144 aa6.66□□□□□ -1.34
CTDNEP1-203ENST00000570385 PLGLAQ15195 96 aa6.66□□□□□ -1.34
CTDNEP1-203ENST00000570385 SRSF7Q16629 238 aaKnown RBP eCLIP6.66□□□□□ -1.34
CTDNEP1-203ENST00000570385 TMEM30BQ3MIR4 351 aa6.66□□□□□ -1.34
CTDNEP1-203ENST00000570385 ZNF833PQ6ZTB9 187 aa6.66□□□□□ -1.34
CTDNEP1-203ENST00000570385 C6orf201Q7Z4U5 140 aa6.66□□□□□ -1.34
CTDNEP1-203ENST00000570385 LYPD6Q86Y78 171 aa6.66□□□□□ -1.34
CTDNEP1-203ENST00000570385 C10orf67Q8IYJ2 551 aa6.66□□□□□ -1.34
CTDNEP1-203ENST00000570385 MINDY2Q8NBR6 621 aa6.66□□□□□ -1.34
CTDNEP1-203ENST00000570385 OR2AK2Q8NG84 335 aa6.66□□□□□ -1.34
CTDNEP1-203ENST00000570385 MUC7Q8TAX7 377 aa6.66□□□□□ -1.34
CTDNEP1-203ENST00000570385 ARPC1AQ92747 370 aa6.66□□□□□ -1.34
CTDNEP1-203ENST00000570385 GALMQ96C23 342 aa6.66□□□□□ -1.34
CTDNEP1-203ENST00000570385 ABHD14BQ96IU4 210 aa6.66□□□□□ -1.34
CTDNEP1-203ENST00000570385 MS4A10Q96PG2 267 aa6.66□□□□□ -1.34
CTDNEP1-203ENST00000570385 RCHY1Q96PM5 261 aa6.66□□□□□ -1.34
CTDNEP1-203ENST00000570385 YPEL2Q96QA6 119 aa6.66□□□□□ -1.34
CTDNEP1-203ENST00000570385 SULT4A1Q9BR01 284 aa6.66□□□□□ -1.34
CTDNEP1-203ENST00000570385 FAM103A1Q9BTL3 118 aaKnown RBP6.66□□□□□ -1.34
CTDNEP1-203ENST00000570385 ZNF580Q9UK33 172 aa6.66□□□□□ -1.34
CTDNEP1-203ENST00000570385 JPT1Q9UK76 154 aa6.66□□□□□ -1.34
CTDNEP1-203ENST00000570385 GAB2Q9UQC2 676 aa6.66□□□□□ -1.34
CTDNEP1-203ENST00000570385 FAM90A7PA6NKC0 464 aa6.65□□□□□ -1.34
CTDNEP1-203ENST00000570385 FAM90A23PA8MXZ1 464 aa6.65□□□□□ -1.34
CTDNEP1-203ENST00000570385 LINC01619G3V211 115 aa6.65□□□□□ -1.34
CTDNEP1-203ENST00000570385 H7C2Y5 167 aa6.65□□□□□ -1.34
CTDNEP1-203ENST00000570385 RGS11O94810 467 aa6.65□□□□□ -1.34
CTDNEP1-203ENST00000570385 FRMD6-AS1P0C7T7 363 aa6.65□□□□□ -1.34
CTDNEP1-203ENST00000570385 CT45A6P0DMU7 189 aa6.65□□□□□ -1.34
CTDNEP1-203ENST00000570385 CT45A5P0DMU8 189 aa6.65□□□□□ -1.34
CTDNEP1-203ENST00000570385 CT45A7P0DMV0 189 aa6.65□□□□□ -1.34
CTDNEP1-203ENST00000570385 GP9P14770 177 aa6.65□□□□□ -1.34
CTDNEP1-203ENST00000570385 HTR2CP28335 458 aa6.65□□□□□ -1.34
CTDNEP1-203ENST00000570385 INSL3P51460 131 aa6.65□□□□□ -1.34
CTDNEP1-203ENST00000570385 LINC00205P59089 165 aa6.65□□□□□ -1.34
CTDNEP1-203ENST00000570385 HTD2P86397 168 aa6.65□□□□□ -1.34
CTDNEP1-203ENST00000570385 RUNX1Q01196 453 aa6.65□□□□□ -1.34
CTDNEP1-203ENST00000570385 C6orf141Q5SZD1 244 aa6.65□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms