RNA–Protein interactions for RNA: ENST00000569827.5

CAPN3-220, Transcript of calpain 3, humanhuman

TSL 5

Gene CAPN3, Length 908 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-220ENST00000569827 FCN1O00602 326 aa9.28□□□□□ -0.92
CAPN3-220ENST00000569827 BAG2O95816 211 aa9.28□□□□□ -0.92
CAPN3-220ENST00000569827 LGALS1P09382 135 aaKnown RBP9.28□□□□□ -0.92
CAPN3-220ENST00000569827 SAA2P0DJI9 122 aaPredicted RBP9.28□□□□□ -0.92
CAPN3-220ENST00000569827 GTF2F2P13984 249 aa9.28□□□□□ -0.92
CAPN3-220ENST00000569827 ALDH3A2P51648 485 aa9.28□□□□□ -0.92
CAPN3-220ENST00000569827 PITPNAQ00169 270 aa9.28□□□□□ -0.92
CAPN3-220ENST00000569827 DEFA5Q01523 94 aa9.28□□□□□ -0.92
CAPN3-220ENST00000569827 RIPK1Q13546 671 aa9.28□□□□□ -0.92
CAPN3-220ENST00000569827 C19orf54Q5BKX5 351 aa9.28□□□□□ -0.92
CAPN3-220ENST00000569827 C6orf183Q5T699 404 aa9.28□□□□□ -0.92
CAPN3-220ENST00000569827 AWAT2Q6E213 333 aa9.28□□□□□ -0.92
CAPN3-220ENST00000569827 SIGIRRQ6IA17 410 aa9.28□□□□□ -0.92
CAPN3-220ENST00000569827 LIN54Q6MZP7 749 aa9.28□□□□□ -0.92
CAPN3-220ENST00000569827 GLIPR1L1Q6UWM5 242 aa9.28□□□□□ -0.92
CAPN3-220ENST00000569827 LINC00596Q86U02 117 aa9.28□□□□□ -0.92
CAPN3-220ENST00000569827 Q8N1Y9 231 aa9.28□□□□□ -0.92
CAPN3-220ENST00000569827 JAGN1Q8N5M9 183 aa9.28□□□□□ -0.92
CAPN3-220ENST00000569827 MINDY2Q8NBR6 621 aa9.28□□□□□ -0.92
CAPN3-220ENST00000569827 FAM46BQ96A09 425 aa9.28□□□□□ -0.92
CAPN3-220ENST00000569827 ISOC1Q96CN7 298 aa9.28□□□□□ -0.92
CAPN3-220ENST00000569827 CLCC1Q96S66 551 aa9.28□□□□□ -0.92
CAPN3-220ENST00000569827 SELENOIQ9C0D9 397 aa9.28□□□□□ -0.92
CAPN3-220ENST00000569827 RETNQ9HD89 108 aa9.28□□□□□ -0.92
CAPN3-220ENST00000569827 ST8SIA5O15466 376 aa9.27□□□□□ -0.93
CAPN3-220ENST00000569827 MAS1P04201 325 aa9.27□□□□□ -0.93
CAPN3-220ENST00000569827 EGR2P11161 476 aaPredicted RBP9.27□□□□□ -0.93
CAPN3-220ENST00000569827 IGFBP3P17936 291 aaPredicted RBP9.27□□□□□ -0.93
CAPN3-220ENST00000569827 RAB40BQ12829 278 aa9.27□□□□□ -0.93
CAPN3-220ENST00000569827 MRPL28Q13084 256 aaKnown RBP9.27□□□□□ -0.93
CAPN3-220ENST00000569827 Q3ZCU0 254 aa9.27□□□□□ -0.93
CAPN3-220ENST00000569827 RPL39P5Q59GN2 51 aa9.27□□□□□ -0.93
CAPN3-220ENST00000569827 ZNF833PQ6ZTB9 187 aa9.27□□□□□ -0.93
CAPN3-220ENST00000569827 MRPL30Q8TCC3 161 aaKnown RBP9.27□□□□□ -0.93
CAPN3-220ENST00000569827 PARP12Q9H0J9 701 aaKnown RBP9.27□□□□□ -0.93
CAPN3-220ENST00000569827 FOXA2Q9Y261 457 aaPredicted RBP9.27□□□□□ -0.93
CAPN3-220ENST00000569827 LDLRAD4O15165 306 aa9.26□□□□□ -0.93
CAPN3-220ENST00000569827 CRTAPO75718 401 aaPredicted RBP9.26□□□□□ -0.93
CAPN3-220ENST00000569827 CIB2O75838 187 aa9.26□□□□□ -0.93
CAPN3-220ENST00000569827 NDUFA3O95167 84 aa9.26□□□□□ -0.93
CAPN3-220ENST00000569827 OR8U9P0C7N5 309 aa9.26□□□□□ -0.93
CAPN3-220ENST00000569827 MGMTP16455 207 aa9.26□□□□□ -0.93
CAPN3-220ENST00000569827 TPPP2P59282 170 aa9.26□□□□□ -0.93
CAPN3-220ENST00000569827 CX3CL1P78423 397 aa9.26□□□□□ -0.93
CAPN3-220ENST00000569827 PLGLAQ15195 96 aa9.26□□□□□ -0.93
CAPN3-220ENST00000569827 RPL22L1Q6P5R6 122 aaKnown RBP9.26□□□□□ -0.93
CAPN3-220ENST00000569827 UNQ5815/PRO19632Q6UWF5 114 aa9.26□□□□□ -0.93
CAPN3-220ENST00000569827 GAPTQ8N292 157 aa9.26□□□□□ -0.93
CAPN3-220ENST00000569827 NPBQ8NG41 125 aa9.26□□□□□ -0.93
CAPN3-220ENST00000569827 RHOXF1Q8NHV9 184 aa9.26□□□□□ -0.93
CAPN3-220ENST00000569827 MRPS24Q96EL2 167 aaKnown RBP9.26□□□□□ -0.93
CAPN3-220ENST00000569827 OR14A2Q96R54 314 aa9.26□□□□□ -0.93
CAPN3-220ENST00000569827 OR4C12Q96R67 309 aa9.26□□□□□ -0.93
CAPN3-220ENST00000569827 SLC29A1Q99808 456 aa9.26□□□□□ -0.93
CAPN3-220ENST00000569827 FAM110AQ9BQ89 295 aa9.26□□□□□ -0.93
CAPN3-220ENST00000569827 IFI27L2Q9H2X8 130 aa9.26□□□□□ -0.93
CAPN3-220ENST00000569827 GHITMQ9H3K2 345 aa9.26□□□□□ -0.93
CAPN3-220ENST00000569827 KCNK15Q9H427 330 aa9.26□□□□□ -0.93
CAPN3-220ENST00000569827 PAK1IP1Q9NWT1 392 aaPredicted RBP9.26□□□□□ -0.93
CAPN3-220ENST00000569827 CLEC2DQ9UHP7 191 aa9.26□□□□□ -0.93
CAPN3-220ENST00000569827 ADAM30Q9UKF2 790 aa9.26□□□□□ -0.93
CAPN3-220ENST00000569827 TRBV5-5A0A0J9YX44 114 aa9.25□□□□□ -0.93
CAPN3-220ENST00000569827 ZNF780AO75290 641 aaPredicted RBP9.25□□□□□ -0.93
CAPN3-220ENST00000569827 WBP4O75554 376 aaKnown RBP9.25□□□□□ -0.93
CAPN3-220ENST00000569827 ARSBP15848 533 aa9.25□□□□□ -0.93
CAPN3-220ENST00000569827 LINC00205P59089 165 aa9.25□□□□□ -0.93
CAPN3-220ENST00000569827 RPS11P62280 158 aaKnown RBP eCLIP9.25□□□□□ -0.93
CAPN3-220ENST00000569827 DOC2BQ14184 412 aa9.25□□□□□ -0.93
CAPN3-220ENST00000569827 PPP1R27Q86WC6 154 aa9.25□□□□□ -0.93
CAPN3-220ENST00000569827 LFNGQ8NES3 379 aa9.25□□□□□ -0.93
CAPN3-220ENST00000569827 IL1F10Q8WWZ1 152 aa9.25□□□□□ -0.93
CAPN3-220ENST00000569827 GHSRQ92847 366 aa9.25□□□□□ -0.93
CAPN3-220ENST00000569827 SMIM19Q96E16 107 aa9.25□□□□□ -0.93
CAPN3-220ENST00000569827 ABHD14BQ96IU4 210 aa9.25□□□□□ -0.93
CAPN3-220ENST00000569827 CHCHD6Q9BRQ6 235 aa9.25□□□□□ -0.93
CAPN3-220ENST00000569827 C19orf73Q9NVV2 129 aa9.25□□□□□ -0.93
CAPN3-220ENST00000569827 JPT1Q9UK76 154 aa9.25□□□□□ -0.93
CAPN3-220ENST00000569827 LOC100130705A0A1B0GUX0 176 aa9.24□□□□□ -0.93
CAPN3-220ENST00000569827 ANKRD34BA5PLL1 514 aa9.24□□□□□ -0.93
CAPN3-220ENST00000569827 RRHO14718 337 aa9.24□□□□□ -0.93
CAPN3-220ENST00000569827 OGG1O15527 345 aa9.24□□□□□ -0.93
CAPN3-220ENST00000569827 SC5DO75845 299 aa9.24□□□□□ -0.93
CAPN3-220ENST00000569827 HSPB1P04792 205 aaKnown RBP9.24□□□□□ -0.93
CAPN3-220ENST00000569827 TMEM30BQ3MIR4 351 aa9.24□□□□□ -0.93
CAPN3-220ENST00000569827 ACTBL2Q562R1 376 aa9.24□□□□□ -0.93
CAPN3-220ENST00000569827 OR10K2Q6IF99 312 aa9.24□□□□□ -0.93
CAPN3-220ENST00000569827 TRAT1Q6PIZ9 186 aa9.24□□□□□ -0.93
CAPN3-220ENST00000569827 ANKRD13BQ86YJ7 626 aa9.24□□□□□ -0.93
CAPN3-220ENST00000569827 OR2AK2Q8NG84 335 aa9.24□□□□□ -0.93
CAPN3-220ENST00000569827 Q96M66 194 aa9.24□□□□□ -0.93
CAPN3-220ENST00000569827 Q96MT0 163 aa9.24□□□□□ -0.93
CAPN3-220ENST00000569827 RDH12Q96NR8 316 aa9.24□□□□□ -0.93
CAPN3-220ENST00000569827 MYCBPQ99417 103 aaPredicted RBP9.24□□□□□ -0.93
CAPN3-220ENST00000569827 SULT4A1Q9BR01 284 aa9.24□□□□□ -0.93
CAPN3-220ENST00000569827 CST11Q9H112 138 aa9.24□□□□□ -0.93
CAPN3-220ENST00000569827 SPACA1Q9HBV2 294 aa9.24□□□□□ -0.93
CAPN3-220ENST00000569827 RAB9BQ9NP90 201 aa9.24□□□□□ -0.93
CAPN3-220ENST00000569827 FGF20Q9NP95 211 aaPredicted RBP9.24□□□□□ -0.93
CAPN3-220ENST00000569827 MBNL3Q9NUK0 354 aaKnown RBP9.24□□□□□ -0.93
CAPN3-220ENST00000569827 MRPS18AQ9NVS2 196 aaKnown RBP9.24□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 75.6 ms