RNA–Protein interactions for RNA: ENST00000569422.1

LINC00558-201, long intergenic non-protein coding RNA 558, humanhuman

TSL 1 (best) BASIC

Gene LINC00558, Length 3,163 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00558-201ENST00000569422 TUSC2O75896 110 aa7.44□□□□□ -1.22
LINC00558-201ENST00000569422 P2RY1P47900 373 aa7.44□□□□□ -1.22
LINC00558-201ENST00000569422 UCP3P55916 312 aa7.44□□□□□ -1.22
LINC00558-201ENST00000569422 UBAC2Q8NBM4 344 aa7.44□□□□□ -1.22
LINC00558-201ENST00000569422 NUDT10Q8NFP7 164 aa7.44□□□□□ -1.22
LINC00558-201ENST00000569422 OR4D5Q8NGN0 318 aa7.44□□□□□ -1.22
LINC00558-201ENST00000569422 SLC25A40Q8TBP6 338 aa7.44□□□□□ -1.22
LINC00558-201ENST00000569422 BCL2L2Q92843 193 aaPredicted RBP7.44□□□□□ -1.22
LINC00558-201ENST00000569422 ISOC2Q96AB3 205 aa7.44□□□□□ -1.22
LINC00558-201ENST00000569422 PLPPR2Q96GM1 343 aa7.44□□□□□ -1.22
LINC00558-201ENST00000569422 SEC11CQ9BY50 192 aa7.44□□□□□ -1.22
LINC00558-201ENST00000569422 MGAQ8IWI9 3026 aa7.44□□□□□ -1.22
LINC00558-201ENST00000569422 WNT9BO14905 357 aa7.43□□□□□ -1.22
LINC00558-201ENST00000569422 TGFAP01135 160 aa7.43□□□□□ -1.22
LINC00558-201ENST00000569422 IAPPP10997 89 aa7.43□□□□□ -1.22
LINC00558-201ENST00000569422 FABP6P51161 128 aa7.43□□□□□ -1.22
LINC00558-201ENST00000569422 DYNLT3P51808 116 aa7.43□□□□□ -1.22
LINC00558-201ENST00000569422 PPP1CBP62140 327 aa7.43□□□□□ -1.22
LINC00558-201ENST00000569422 RBX1P62877 108 aa7.43□□□□□ -1.22
LINC00558-201ENST00000569422 TMEM267Q0VDI3 215 aaPredicted RBP7.43□□□□□ -1.22
LINC00558-201ENST00000569422 IL13RA2Q14627 380 aa7.43□□□□□ -1.22
LINC00558-201ENST00000569422 GUK1Q16774 197 aa7.43□□□□□ -1.22
LINC00558-201ENST00000569422 MPV17LQ2QL34 196 aa7.43□□□□□ -1.22
LINC00558-201ENST00000569422 PET117Q6UWS5 81 aa7.43□□□□□ -1.22
LINC00558-201ENST00000569422 WDR86Q86TI4 376 aa7.43□□□□□ -1.22
LINC00558-201ENST00000569422 TPRX1Q8N7U7 411 aa7.43□□□□□ -1.22
LINC00558-201ENST00000569422 SCCPDHQ8NBX0 429 aa7.43□□□□□ -1.22
LINC00558-201ENST00000569422 PLPPR1Q8TBJ4 325 aa7.43□□□□□ -1.22
LINC00558-201ENST00000569422 PACRGQ96M98 296 aaPredicted RBP7.43□□□□□ -1.22
LINC00558-201ENST00000569422 PARP11Q9NR21 331 aa7.43□□□□□ -1.22
LINC00558-201ENST00000569422 ZFHX2Q9C0A1 2572 aaPredicted RBP7.43□□□□□ -1.22
LINC00558-201ENST00000569422 TMEM50AO95807 157 aa7.43□□□□□ -1.22
LINC00558-201ENST00000569422 OR2H2O95918 312 aa7.43□□□□□ -1.22
LINC00558-201ENST00000569422 GAPDHP04406 335 aaKnown RBP7.43□□□□□ -1.22
LINC00558-201ENST00000569422 SMIM6P0DI80 62 aa7.43□□□□□ -1.22
LINC00558-201ENST00000569422 IGHV1-2P23083 117 aa7.43□□□□□ -1.22
LINC00558-201ENST00000569422 PEA15Q15121 130 aa7.43□□□□□ -1.22
LINC00558-201ENST00000569422 LTC4SQ16873 150 aa7.43□□□□□ -1.22
LINC00558-201ENST00000569422 LRTM2Q8N967 370 aa7.43□□□□□ -1.22
LINC00558-201ENST00000569422 TMEM178AQ8NBL3 297 aa7.43□□□□□ -1.22
LINC00558-201ENST00000569422 TMEM171Q8WVE6 324 aa7.43□□□□□ -1.22
LINC00558-201ENST00000569422 ZCCHC14Q8WYQ9 949 aaKnown RBP7.43□□□□□ -1.22
LINC00558-201ENST00000569422 ZNF48Q96MX3 618 aaPredicted RBP7.43□□□□□ -1.22
LINC00558-201ENST00000569422 TOLLIPQ9H0E2 274 aa7.43□□□□□ -1.22
LINC00558-201ENST00000569422 NGBQ9NPG2 151 aa7.43□□□□□ -1.22
LINC00558-201ENST00000569422 MPC1Q9Y5U8 109 aa7.43□□□□□ -1.22
LINC00558-201ENST00000569422 DCHS1Q96JQ0 3298 aa7.43□□□□□ -1.22
LINC00558-201ENST00000569422 DIDO1Q9BTC0 2240 aaKnown RBP7.43□□□□□ -1.22
LINC00558-201ENST00000569422 ATP6V0CP27449 155 aa7.43□□□□□ -1.22
LINC00558-201ENST00000569422 DVL1P1P54792 670 aaPredicted RBP7.43□□□□□ -1.22
LINC00558-201ENST00000569422 LBHQ53QV2 105 aaPredicted RBP7.43□□□□□ -1.22
LINC00558-201ENST00000569422 GPR157Q5UAW9 335 aa7.43□□□□□ -1.22
LINC00558-201ENST00000569422 PCSK4Q6UW60 755 aa7.43□□□□□ -1.22
LINC00558-201ENST00000569422 TMEM252Q8N6L7 170 aa7.43□□□□□ -1.22
LINC00558-201ENST00000569422 DPF1Q92782 380 aa7.43□□□□□ -1.22
LINC00558-201ENST00000569422 RARRES2Q99969 163 aa7.43□□□□□ -1.22
LINC00558-201ENST00000569422 OR51I2Q9H344 312 aa7.43□□□□□ -1.22
LINC00558-201ENST00000569422 MSL2Q9HCI7 577 aa7.43□□□□□ -1.22
LINC00558-201ENST00000569422 HIF1ANQ9NWT6 349 aa7.43□□□□□ -1.22
LINC00558-201ENST00000569422 CACFD1Q9UGQ2 172 aa7.43□□□□□ -1.22
LINC00558-201ENST00000569422 CDS2O95674 445 aa7.42□□□□□ -1.22
LINC00558-201ENST00000569422 CLEC3BP05452 202 aa7.42□□□□□ -1.22
LINC00558-201ENST00000569422 DANCRP0C864 163 aa7.42□□□□□ -1.22
LINC00558-201ENST00000569422 MPV17P39210 176 aa7.42□□□□□ -1.22
LINC00558-201ENST00000569422 RPS16P62249 146 aaKnown RBP7.42□□□□□ -1.22
LINC00558-201ENST00000569422 CCL20P78556 96 aa7.42□□□□□ -1.22
LINC00558-201ENST00000569422 DEFA6Q01524 100 aa7.42□□□□□ -1.22
LINC00558-201ENST00000569422 ESPL1Q14674 2120 aa7.42□□□□□ -1.22
LINC00558-201ENST00000569422 VWA1Q6PCB0 445 aa7.42□□□□□ -1.22
LINC00558-201ENST00000569422 ZNF808Q8N4W9 903 aaPredicted RBP7.42□□□□□ -1.22
LINC00558-201ENST00000569422 C22orf15Q8WYQ4 148 aa7.42□□□□□ -1.22
LINC00558-201ENST00000569422 C14orf79Q96F83 325 aa7.42□□□□□ -1.22
LINC00558-201ENST00000569422 IP6K3Q96PC2 410 aa7.42□□□□□ -1.22
LINC00558-201ENST00000569422 CLCC1Q96S66 551 aa7.42□□□□□ -1.22
LINC00558-201ENST00000569422 RTL8AQ9BWD3 113 aa7.42□□□□□ -1.22
LINC00558-201ENST00000569422 GAL3ST2Q9H3Q3 398 aa7.42□□□□□ -1.22
LINC00558-201ENST00000569422 CARHSP1Q9Y2V2 147 aaKnown RBP7.42□□□□□ -1.22
LINC00558-201ENST00000569422 OR2W1Q9Y3N9 320 aa7.42□□□□□ -1.22
LINC00558-201ENST00000569422 ICE1Q9Y2F5 2266 aa7.42□□□□□ -1.22
LINC00558-201ENST00000569422 OR5B21A6NL26 309 aa7.42□□□□□ -1.22
LINC00558-201ENST00000569422 SPP1P10451 314 aa7.42□□□□□ -1.22
LINC00558-201ENST00000569422 WT1P19544 449 aaPredicted RBP7.42□□□□□ -1.22
LINC00558-201ENST00000569422 S100GP29377 79 aa7.42□□□□□ -1.22
LINC00558-201ENST00000569422 SNCAP37840 140 aa7.42□□□□□ -1.22
LINC00558-201ENST00000569422 CEACAM6P40199 344 aa7.42□□□□□ -1.22
LINC00558-201ENST00000569422 KCNJ3P48549 501 aa7.42□□□□□ -1.22
LINC00558-201ENST00000569422 TNFSF10P50591 281 aa7.42□□□□□ -1.22
LINC00558-201ENST00000569422 HLA-DRB3P79483 266 aa7.42□□□□□ -1.22
LINC00558-201ENST00000569422 TGFBR3Q03167 851 aa7.42□□□□□ -1.22
LINC00558-201ENST00000569422 OR8G1Q15617 311 aa7.42□□□□□ -1.22
LINC00558-201ENST00000569422 HAGHQ16775 308 aa7.42□□□□□ -1.22
LINC00558-201ENST00000569422 RXFP4Q8TDU9 374 aa7.42□□□□□ -1.22
LINC00558-201ENST00000569422 GLMPQ8WWB7 406 aa7.42□□□□□ -1.22
LINC00558-201ENST00000569422 GPR146Q96CH1 333 aa7.42□□□□□ -1.22
LINC00558-201ENST00000569422 SPIN2AQ99865 258 aa7.42□□□□□ -1.22
LINC00558-201ENST00000569422 SPIN2BQ9BPZ2 258 aa7.42□□□□□ -1.22
LINC00558-201ENST00000569422 PTPRZ1P23471 2315 aaPredicted RBP7.42□□□□□ -1.22
LINC00558-201ENST00000569422 MED12LQ86YW9 2145 aa7.41□□□□□ -1.22
LINC00558-201ENST00000569422 SMG1Q96Q15 3661 aaKnown RBP7.41□□□□□ -1.22
LINC00558-201ENST00000569422 J3QT63 122 aa7.41□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms