RNA–Protein interactions for RNA: ENST00000569136.5

CAPN3-219, Transcript of calpain 3, humanhuman

TSL 2 BASIC

Gene CAPN3, Length 1,029 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-219ENST00000569136 RAB7AP51149 207 aa7.38□□□□□ -1.23
CAPN3-219ENST00000569136 RAB13P51153 203 aa7.38□□□□□ -1.23
CAPN3-219ENST00000569136 LOXL3P58215 753 aa7.38□□□□□ -1.23
CAPN3-219ENST00000569136 HTD2P86397 168 aa7.38□□□□□ -1.23
CAPN3-219ENST00000569136 ARL6IP1Q15041 203 aa7.38□□□□□ -1.23
CAPN3-219ENST00000569136 P2RY14Q15391 338 aa7.38□□□□□ -1.23
CAPN3-219ENST00000569136 LY6G6FQ5SQ64 297 aa7.38□□□□□ -1.23
CAPN3-219ENST00000569136 LDLRAD2Q5SZI1 272 aa7.38□□□□□ -1.23
CAPN3-219ENST00000569136 TPTE2P1Q5T6R2 138 aa7.38□□□□□ -1.23
CAPN3-219ENST00000569136 OR10K2Q6IF99 312 aa7.38□□□□□ -1.23
CAPN3-219ENST00000569136 Q6ZTK2 550 aa7.38□□□□□ -1.23
CAPN3-219ENST00000569136 OR8H3Q8N146 312 aa7.38□□□□□ -1.23
CAPN3-219ENST00000569136 OR51D1Q8NGF3 324 aa7.38□□□□□ -1.23
CAPN3-219ENST00000569136 OR2T6Q8NHC8 308 aa7.38□□□□□ -1.23
CAPN3-219ENST00000569136 GALMQ96C23 342 aa7.38□□□□□ -1.23
CAPN3-219ENST00000569136 RAX2Q96IS3 184 aa7.38□□□□□ -1.23
CAPN3-219ENST00000569136 KCTD7Q96MP8 289 aa7.38□□□□□ -1.23
CAPN3-219ENST00000569136 GFI1Q99684 422 aa7.38□□□□□ -1.23
CAPN3-219ENST00000569136 FAAP24Q9BTP7 215 aa7.38□□□□□ -1.23
CAPN3-219ENST00000569136 CENPOQ9BU64 300 aa7.38□□□□□ -1.23
CAPN3-219ENST00000569136 PRSS22Q9GZN4 317 aa7.38□□□□□ -1.23
CAPN3-219ENST00000569136 OR2S2Q9NQN1 319 aa7.38□□□□□ -1.23
CAPN3-219ENST00000569136 ABRACLQ9P1F3 81 aa7.38□□□□□ -1.23
CAPN3-219ENST00000569136 GNG12Q9UBI6 72 aa7.38□□□□□ -1.23
CAPN3-219ENST00000569136 ANK2Q01484 3957 aa7.37□□□□□ -1.23
CAPN3-219ENST00000569136 TRAV39A0A0B4J263 110 aa7.37□□□□□ -1.23
CAPN3-219ENST00000569136 C12orf77C9JDV5 145 aa7.37□□□□□ -1.23
CAPN3-219ENST00000569136 LDLRAD4O15165 306 aa7.37□□□□□ -1.23
CAPN3-219ENST00000569136 TMEM127O75204 238 aa7.37□□□□□ -1.23
CAPN3-219ENST00000569136 TNFAIP8O95379 198 aa7.37□□□□□ -1.23
CAPN3-219ENST00000569136 HBZP02008 142 aa7.37□□□□□ -1.23
CAPN3-219ENST00000569136 RCC1P18754 421 aaPredicted RBP7.37□□□□□ -1.23
CAPN3-219ENST00000569136 PROK1P58294 105 aa7.37□□□□□ -1.23
CAPN3-219ENST00000569136 CD69Q07108 199 aa7.37□□□□□ -1.23
CAPN3-219ENST00000569136 UNC119Q13432 240 aa7.37□□□□□ -1.23
CAPN3-219ENST00000569136 TIMM50Q3ZCQ8 353 aa7.37□□□□□ -1.23
CAPN3-219ENST00000569136 C22orf42Q6IC83 251 aa7.37□□□□□ -1.23
CAPN3-219ENST00000569136 BAIAP2L2Q6UXY1 529 aa7.37□□□□□ -1.23
CAPN3-219ENST00000569136 MOB1BQ7L9L4 216 aa7.37□□□□□ -1.23
CAPN3-219ENST00000569136 C6orf201Q7Z4U5 140 aa7.37□□□□□ -1.23
CAPN3-219ENST00000569136 Q8N2B8 174 aa7.37□□□□□ -1.23
CAPN3-219ENST00000569136 TSPAN14Q8NG11 270 aa7.37□□□□□ -1.23
CAPN3-219ENST00000569136 OR4K15Q8NH41 348 aa7.37□□□□□ -1.23
CAPN3-219ENST00000569136 SULT4A1Q9BR01 284 aa7.37□□□□□ -1.23
CAPN3-219ENST00000569136 LPAR5Q9H1C0 372 aa7.37□□□□□ -1.23
CAPN3-219ENST00000569136 GHITMQ9H3K2 345 aa7.37□□□□□ -1.23
CAPN3-219ENST00000569136 ZNF696Q9H7X3 374 aa7.37□□□□□ -1.23
CAPN3-219ENST00000569136 TAF9BQ9HBM6 251 aa7.37□□□□□ -1.23
CAPN3-219ENST00000569136 CHMP1AQ9HD42 196 aaPredicted RBP7.37□□□□□ -1.23
CAPN3-219ENST00000569136 TXNL4BQ9NX01 149 aaKnown RBP7.37□□□□□ -1.23
CAPN3-219ENST00000569136 A0A1W2PRX2 142 aa7.36□□□□□ -1.23
CAPN3-219ENST00000569136 FAM90A9PA6NNJ1 464 aa7.36□□□□□ -1.23
CAPN3-219ENST00000569136 TIMM23O14925 209 aa7.36□□□□□ -1.23
CAPN3-219ENST00000569136 YPEL1O60688 119 aa7.36□□□□□ -1.23
CAPN3-219ENST00000569136 NAPSAO96009 420 aa7.36□□□□□ -1.23
CAPN3-219ENST00000569136 GADD45AP24522 165 aa7.36□□□□□ -1.23
CAPN3-219ENST00000569136 PAX6P26367 422 aa7.36□□□□□ -1.23
CAPN3-219ENST00000569136 VEGFCP49767 419 aa7.36□□□□□ -1.23
CAPN3-219ENST00000569136 TMEM50BP56557 158 aa7.36□□□□□ -1.23
CAPN3-219ENST00000569136 MRPS15P82914 257 aaKnown RBP7.36□□□□□ -1.23
CAPN3-219ENST00000569136 LTC4SQ16873 150 aa7.36□□□□□ -1.23
CAPN3-219ENST00000569136 PLA1AQ53H76 456 aa7.36□□□□□ -1.23
CAPN3-219ENST00000569136 CCBE1Q6UXH8 406 aaPredicted RBP7.36□□□□□ -1.23
CAPN3-219ENST00000569136 MRPL30Q8TCC3 161 aaKnown RBP7.36□□□□□ -1.23
CAPN3-219ENST00000569136 TOMM40LQ969M1 308 aa7.36□□□□□ -1.23
CAPN3-219ENST00000569136 RBM14Q96PK6 669 aaKnown RBP7.36□□□□□ -1.23
CAPN3-219ENST00000569136 YPEL2Q96QA6 119 aa7.36□□□□□ -1.23
CAPN3-219ENST00000569136 CITED1Q99966 193 aa7.36□□□□□ -1.23
CAPN3-219ENST00000569136 TMEM272A0A1B0GTI8 110 aa7.35□□□□□ -1.23
CAPN3-219ENST00000569136 FAM172BPA6NC97 362 aa7.35□□□□□ -1.23
CAPN3-219ENST00000569136 SOCS1O15524 211 aa7.35□□□□□ -1.23
CAPN3-219ENST00000569136 TXNL1O43396 289 aa7.35□□□□□ -1.23
CAPN3-219ENST00000569136 SCGNO76038 276 aa7.35□□□□□ -1.23
CAPN3-219ENST00000569136 OR2F2O95006 317 aa7.35□□□□□ -1.23
CAPN3-219ENST00000569136 LY86O95711 162 aa7.35□□□□□ -1.23
CAPN3-219ENST00000569136 CD36P16671 472 aa7.35□□□□□ -1.23
CAPN3-219ENST00000569136 CLDN12P56749 244 aa7.35□□□□□ -1.23
CAPN3-219ENST00000569136 ZNF816Q0VGE8 651 aaPredicted RBP7.35□□□□□ -1.23
CAPN3-219ENST00000569136 NEDD8Q15843 81 aa7.35□□□□□ -1.23
CAPN3-219ENST00000569136 MORN2Q502X0 79 aa7.35□□□□□ -1.23
CAPN3-219ENST00000569136 HES5Q5TA89 166 aa7.35□□□□□ -1.23
CAPN3-219ENST00000569136 ZNF880Q6PDB4 577 aa7.35□□□□□ -1.23
CAPN3-219ENST00000569136 SLC25A48Q6ZT89 311 aaKnown RBP7.35□□□□□ -1.23
CAPN3-219ENST00000569136 LYSMD2Q8IV50 215 aa7.35□□□□□ -1.23
CAPN3-219ENST00000569136 CROCCP3Q8IVE0 287 aa7.35□□□□□ -1.23
CAPN3-219ENST00000569136 OR1L1Q8NH94 360 aa7.35□□□□□ -1.23
CAPN3-219ENST00000569136 CFHR4Q92496 578 aa7.35□□□□□ -1.23
CAPN3-219ENST00000569136 TAF15Q92804 592 aaKnown RBP eCLIP7.35□□□□□ -1.23
CAPN3-219ENST00000569136 LEAP2Q969E1 77 aa7.35□□□□□ -1.23
CAPN3-219ENST00000569136 RAB3CQ96E17 227 aa7.35□□□□□ -1.23
CAPN3-219ENST00000569136 NICN1Q9BSH3 213 aa7.35□□□□□ -1.23
CAPN3-219ENST00000569136 JPT1Q9UK76 154 aa7.35□□□□□ -1.23
CAPN3-219ENST00000569136 A0A0A6YYD4 124 aa7.34□□□□□ -1.23
CAPN3-219ENST00000569136 FOXI3A8MTJ6 420 aaPredicted RBP7.34□□□□□ -1.23
CAPN3-219ENST00000569136 SERPINE3A8MV23 424 aa7.34□□□□□ -1.23
CAPN3-219ENST00000569136 M0QZ24 198 aa7.34□□□□□ -1.23
CAPN3-219ENST00000569136 ITGB1BP1O14713 200 aa7.34□□□□□ -1.23
CAPN3-219ENST00000569136 CHST1O43916 411 aa7.34□□□□□ -1.23
CAPN3-219ENST00000569136 PEX14O75381 377 aa7.34□□□□□ -1.23
CAPN3-219ENST00000569136 IGHV3-7P01780 117 aa7.34□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms