RNA–Protein interactions for RNA: ENST00000569080.1

CDH3-209, Transcript of cadherin 3, humanhuman

TSL 5

Gene CDH3, Length 291 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH3-209ENST00000569080 LINC00527Q9UJ94 153 aa6.16□□□□□ -1.42
CDH3-209ENST00000569080 AK6Q9Y3D8 172 aaKnown RBP6.16□□□□□ -1.42
CDH3-209ENST00000569080 SAA2-SAA4A0A096LPE2 208 aa6.15□□□□□ -1.42
CDH3-209ENST00000569080 ERICH4A6NGS2 130 aa6.15□□□□□ -1.42
CDH3-209ENST00000569080 AP4M1O00189 453 aa6.15□□□□□ -1.42
CDH3-209ENST00000569080 SOCS1O15524 211 aa6.15□□□□□ -1.42
CDH3-209ENST00000569080 YPEL1O60688 119 aa6.15□□□□□ -1.42
CDH3-209ENST00000569080 SAA2P0DJI9 122 aaPredicted RBP6.15□□□□□ -1.42
CDH3-209ENST00000569080 PF4V1P10720 104 aa6.15□□□□□ -1.42
CDH3-209ENST00000569080 IGLL1P15814 213 aa6.15□□□□□ -1.42
CDH3-209ENST00000569080 HSPA13P48723 471 aa6.15□□□□□ -1.42
CDH3-209ENST00000569080 F2RL1P55085 397 aa6.15□□□□□ -1.42
CDH3-209ENST00000569080 TMEM50BP56557 158 aa6.15□□□□□ -1.42
CDH3-209ENST00000569080 CLDN12P56749 244 aa6.15□□□□□ -1.42
CDH3-209ENST00000569080 PLA2G7Q13093 441 aa6.15□□□□□ -1.42
CDH3-209ENST00000569080 P2RY14Q15391 338 aa6.15□□□□□ -1.42
CDH3-209ENST00000569080 TRAM1Q15629 374 aa6.15□□□□□ -1.42
CDH3-209ENST00000569080 CD200R1LQ6Q8B3 271 aa6.15□□□□□ -1.42
CDH3-209ENST00000569080 MOB1BQ7L9L4 216 aa6.15□□□□□ -1.42
CDH3-209ENST00000569080 ZNF367Q7RTV3 350 aa6.15□□□□□ -1.42
CDH3-209ENST00000569080 RNF152Q8N8N0 203 aa6.15□□□□□ -1.42
CDH3-209ENST00000569080 OR8H1Q8NGG4 311 aa6.15□□□□□ -1.42
CDH3-209ENST00000569080 CHPT1Q8WUD6 406 aa6.15□□□□□ -1.42
CDH3-209ENST00000569080 CNBD2Q96M20 576 aa6.15□□□□□ -1.42
CDH3-209ENST00000569080 NEDD4LQ96PU5 975 aa6.15□□□□□ -1.42
CDH3-209ENST00000569080 YPEL2Q96QA6 119 aa6.15□□□□□ -1.42
CDH3-209ENST00000569080 S1PR3Q99500 378 aa6.15□□□□□ -1.42
CDH3-209ENST00000569080 NABP2Q9BQ15 211 aa6.15□□□□□ -1.42
CDH3-209ENST00000569080 HDHD3Q9BSH5 251 aaPredicted RBP6.15□□□□□ -1.42
CDH3-209ENST00000569080 VCX3BQ9H321 246 aa6.15□□□□□ -1.42
CDH3-209ENST00000569080 ACOT13Q9NPJ3 140 aa6.15□□□□□ -1.42
CDH3-209ENST00000569080 AURKAIP1Q9NWT8 199 aaPredicted RBP6.15□□□□□ -1.42
CDH3-209ENST00000569080 NDUFB11Q9NX14 153 aa6.15□□□□□ -1.42
CDH3-209ENST00000569080 ZNF580Q9UK33 172 aa6.15□□□□□ -1.42
CDH3-209ENST00000569080 KMT2CQ8NEZ4 4911 aaKnown RBP6.14□□□□□ -1.43
CDH3-209ENST00000569080 IGKV1-6A0A0C4DH72 117 aa6.14□□□□□ -1.43
CDH3-209ENST00000569080 SERPINE3A8MV23 424 aa6.14□□□□□ -1.43
CDH3-209ENST00000569080 ARL6IP5O75915 188 aa6.14□□□□□ -1.43
CDH3-209ENST00000569080 ARSBP15848 533 aa6.14□□□□□ -1.43
CDH3-209ENST00000569080 CALRP27797 417 aaKnown RBP6.14□□□□□ -1.43
CDH3-209ENST00000569080 BLVRBP30043 206 aaPredicted RBP6.14□□□□□ -1.43
CDH3-209ENST00000569080 OR3A3P47888 321 aa6.14□□□□□ -1.43
CDH3-209ENST00000569080 THBS3P49746 956 aa6.14□□□□□ -1.43
CDH3-209ENST00000569080 OR10A3P58181 314 aa6.14□□□□□ -1.43
CDH3-209ENST00000569080 HLA-DRB3P79483 266 aa6.14□□□□□ -1.43
CDH3-209ENST00000569080 RAB11BQ15907 218 aa6.14□□□□□ -1.43
CDH3-209ENST00000569080 KHDC1LQ5JSQ8 128 aa6.14□□□□□ -1.43
CDH3-209ENST00000569080 PLAC9Q5JTB6 97 aa6.14□□□□□ -1.43
CDH3-209ENST00000569080 FOXB2Q5VYV0 432 aa6.14□□□□□ -1.43
CDH3-209ENST00000569080 FAM71F2Q6NXP2 309 aa6.14□□□□□ -1.43
CDH3-209ENST00000569080 C8orf86Q6ZUL3 223 aa6.14□□□□□ -1.43
CDH3-209ENST00000569080 REC114Q7Z4M0 266 aa6.14□□□□□ -1.43
CDH3-209ENST00000569080 NR2C2APQ86WQ0 139 aa6.14□□□□□ -1.43
CDH3-209ENST00000569080 FOXRED2Q8IWF2 684 aa6.14□□□□□ -1.43
CDH3-209ENST00000569080 MRPL41Q8IXM3 137 aaKnown RBP6.14□□□□□ -1.43
CDH3-209ENST00000569080 OR51D1Q8NGF3 324 aa6.14□□□□□ -1.43
CDH3-209ENST00000569080 MYOZ3Q8TDC0 251 aa6.14□□□□□ -1.43
CDH3-209ENST00000569080 GALMQ96C23 342 aa6.14□□□□□ -1.43
CDH3-209ENST00000569080 RITA1Q96K30 269 aa6.14□□□□□ -1.43
CDH3-209ENST00000569080 P2RX4Q99571 388 aa6.14□□□□□ -1.43
CDH3-209ENST00000569080 AGMATQ9BSE5 352 aa6.14□□□□□ -1.43
CDH3-209ENST00000569080 CCDC90BQ9GZT6 254 aa6.14□□□□□ -1.43
CDH3-209ENST00000569080 PLGRKTQ9HBL7 147 aa6.14□□□□□ -1.43
CDH3-209ENST00000569080 C12orf4Q9NQ89 552 aa6.14□□□□□ -1.43
CDH3-209ENST00000569080 NECAP2Q9NVZ3 263 aa6.14□□□□□ -1.43
CDH3-209ENST00000569080 KCNIP1Q9NZI2 227 aa6.14□□□□□ -1.43
CDH3-209ENST00000569080 OR1A1Q9P1Q5 309 aa6.14□□□□□ -1.43
CDH3-209ENST00000569080 ZNF107Q9UII5 783 aaPredicted RBP6.14□□□□□ -1.43
CDH3-209ENST00000569080 AK3Q9UIJ7 227 aa6.14□□□□□ -1.43
CDH3-209ENST00000569080 HSF4Q9ULV5 492 aa6.14□□□□□ -1.43
CDH3-209ENST00000569080 RAB26Q9ULW5 256 aa6.14□□□□□ -1.43
CDH3-209ENST00000569080 KCNK7Q9Y2U2 307 aa6.14□□□□□ -1.43
CDH3-209ENST00000569080 TMEM272A0A1B0GTI8 110 aa6.13□□□□□ -1.43
CDH3-209ENST00000569080 NCBP2LA6PVI3 153 aaKnown RBP6.13□□□□□ -1.43
CDH3-209ENST00000569080 ITGB1BP1O14713 200 aa6.13□□□□□ -1.43
CDH3-209ENST00000569080 ST8SIA5O15466 376 aa6.13□□□□□ -1.43
CDH3-209ENST00000569080 PROP1O75360 226 aa6.13□□□□□ -1.43
CDH3-209ENST00000569080 NDUFA3O95167 84 aa6.13□□□□□ -1.43
CDH3-209ENST00000569080 ATP6V1G2O95670 118 aa6.13□□□□□ -1.43
CDH3-209ENST00000569080 HLA-DRB1P01911 266 aa6.13□□□□□ -1.43
CDH3-209ENST00000569080 PF4P02776 101 aa6.13□□□□□ -1.43
CDH3-209ENST00000569080 IGF1P05019 195 aa6.13□□□□□ -1.43
CDH3-209ENST00000569080 CD33P20138 364 aa6.13□□□□□ -1.43
CDH3-209ENST00000569080 CNTFRP26992 372 aa6.13□□□□□ -1.43
CDH3-209ENST00000569080 SLC6A1P30531 599 aa6.13□□□□□ -1.43
CDH3-209ENST00000569080 GABARAPL2P60520 117 aa6.13□□□□□ -1.43
CDH3-209ENST00000569080 ACTBP60709 375 aa6.13□□□□□ -1.43
CDH3-209ENST00000569080 NDPQ00604 133 aa6.13□□□□□ -1.43
CDH3-209ENST00000569080 EGFEM1PQ0D2K5 195 aa6.13□□□□□ -1.43
CDH3-209ENST00000569080 MMDQ15546 238 aa6.13□□□□□ -1.43
CDH3-209ENST00000569080 MOGAT2Q3SYC2 334 aa6.13□□□□□ -1.43
CDH3-209ENST00000569080 LCNL1Q6ZST4 164 aa6.13□□□□□ -1.43
CDH3-209ENST00000569080 COMMD1Q8N668 190 aa6.13□□□□□ -1.43
CDH3-209ENST00000569080 OR2AK2Q8NG84 335 aa6.13□□□□□ -1.43
CDH3-209ENST00000569080 FAM3DQ96BQ1 224 aa6.13□□□□□ -1.43
CDH3-209ENST00000569080 RCC1LQ96I51 464 aaKnown RBP6.13□□□□□ -1.43
CDH3-209ENST00000569080 ARHGAP5-AS1Q96IT6 56 aa6.13□□□□□ -1.43
CDH3-209ENST00000569080 URM1Q9BTM9 101 aaKnown RBP6.13□□□□□ -1.43
CDH3-209ENST00000569080 PECRQ9BY49 303 aa6.13□□□□□ -1.43
CDH3-209ENST00000569080 Q9N2K0 584 aa6.13□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 69.6 ms