RNA–Protein interactions for RNA: ENST00000568848.5

USB1-214, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 4

Gene USB1, Length 548 nt, Biotype processed transcript, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-214ENST00000568848 GLDNQ6ZMI3 551 aaPredicted RBP11.39□□□□□ -0.59
USB1-214ENST00000568848 MINDY2Q8NBR6 621 aa11.39□□□□□ -0.59
USB1-214ENST00000568848 OR8H1Q8NGG4 311 aa11.39□□□□□ -0.59
USB1-214ENST00000568848 OR6Q1Q8NGQ2 317 aa11.39□□□□□ -0.59
USB1-214ENST00000568848 ABHD5Q8WTS1 349 aa11.39□□□□□ -0.59
USB1-214ENST00000568848 GGHQ92820 318 aa11.39□□□□□ -0.59
USB1-214ENST00000568848 CLCC1Q96S66 551 aa11.39□□□□□ -0.59
USB1-214ENST00000568848 NABP2Q9BQ15 211 aa11.39□□□□□ -0.59
USB1-214ENST00000568848 TRAPPC2LQ9UL33 140 aa11.39□□□□□ -0.59
USB1-214ENST00000568848 HERC2O95714 4834 aa11.39□□□□□ -0.59
USB1-214ENST00000568848 NBR2O15453 112 aa11.38□□□□□ -0.59
USB1-214ENST00000568848 ORC5O43913 435 aa11.38□□□□□ -0.59
USB1-214ENST00000568848 HLA-DRB1P01911 266 aa11.38□□□□□ -0.59
USB1-214ENST00000568848 C5orf64Q2M2E5 130 aa11.38□□□□□ -0.59
USB1-214ENST00000568848 OGFRL1Q5TC84 451 aaPredicted RBP11.38□□□□□ -0.59
USB1-214ENST00000568848 LAIR2Q6ISS4 152 aa11.38□□□□□ -0.59
USB1-214ENST00000568848 RPL22L1Q6P5R6 122 aaKnown RBP11.38□□□□□ -0.59
USB1-214ENST00000568848 TMPRSS11AQ6ZMR5 421 aa11.38□□□□□ -0.59
USB1-214ENST00000568848 C8orf31Q8N9H6 132 aa11.38□□□□□ -0.59
USB1-214ENST00000568848 SETD9Q8NE22 299 aa11.38□□□□□ -0.59
USB1-214ENST00000568848 TMEM80Q96HE8 168 aa11.38□□□□□ -0.59
USB1-214ENST00000568848 METTL9Q9H1A3 318 aa11.38□□□□□ -0.59
USB1-214ENST00000568848 DIMT1Q9UNQ2 313 aaKnown RBP11.38□□□□□ -0.59
USB1-214ENST00000568848 UBE2QL1A1L167 161 aa11.37□□□□□ -0.59
USB1-214ENST00000568848 CASQ2O14958 399 aaPredicted RBP11.37□□□□□ -0.59
USB1-214ENST00000568848 MAGEB3O15480 346 aa11.37□□□□□ -0.59
USB1-214ENST00000568848 OGG1O15527 345 aa11.37□□□□□ -0.59
USB1-214ENST00000568848 CSTBP04080 98 aaKnown RBP11.37□□□□□ -0.59
USB1-214ENST00000568848 CAPGP40121 348 aa11.37□□□□□ -0.59
USB1-214ENST00000568848 LIN54Q6MZP7 749 aa11.37□□□□□ -0.59
USB1-214ENST00000568848 FAM131AQ6UXB0 335 aa11.37□□□□□ -0.59
USB1-214ENST00000568848 ZFP41Q8N8Y5 198 aa11.37□□□□□ -0.59
USB1-214ENST00000568848 OR4C12Q96R67 309 aa11.37□□□□□ -0.59
USB1-214ENST00000568848 ZNF251Q9BRH9 671 aa11.37□□□□□ -0.59
USB1-214ENST00000568848 PARP12Q9H0J9 701 aaKnown RBP11.37□□□□□ -0.59
USB1-214ENST00000568848 BANF2Q9H503 90 aa11.37□□□□□ -0.59
USB1-214ENST00000568848 IFT22Q9H7X7 185 aa11.37□□□□□ -0.59
USB1-214ENST00000568848 C8orf4Q9NR00 106 aa11.37□□□□□ -0.59
USB1-214ENST00000568848 BABAM2Q9NXR7 383 aa11.37□□□□□ -0.59
USB1-214ENST00000568848 ETAA1Q9NY74 926 aa11.37□□□□□ -0.59
USB1-214ENST00000568848 NKX1-2Q9UD57 310 aaPredicted RBP11.37□□□□□ -0.59
USB1-214ENST00000568848 ZNF580Q9UK33 172 aa11.37□□□□□ -0.59
USB1-214ENST00000568848 EXOSC1Q9Y3B2 195 aaKnown RBP11.37□□□□□ -0.59
USB1-214ENST00000568848 IRGMA1A4Y4 181 aa11.36□□□□□ -0.59
USB1-214ENST00000568848 IZUMO1RA6ND01 250 aa11.36□□□□□ -0.59
USB1-214ENST00000568848 LANCL1O43813 399 aa11.36□□□□□ -0.59
USB1-214ENST00000568848 OR8U9P0C7N5 309 aa11.36□□□□□ -0.59
USB1-214ENST00000568848 MYL12AP19105 171 aa11.36□□□□□ -0.59
USB1-214ENST00000568848 ZNF93P35789 620 aaPredicted RBP11.36□□□□□ -0.59
USB1-214ENST00000568848 TPPP2P59282 170 aa11.36□□□□□ -0.59
USB1-214ENST00000568848 CX3CL1P78423 397 aa11.36□□□□□ -0.59
USB1-214ENST00000568848 ST3GAL4Q11206 333 aa11.36□□□□□ -0.59
USB1-214ENST00000568848 CCDC58Q4VC31 144 aa11.36□□□□□ -0.59
USB1-214ENST00000568848 MORN2Q502X0 79 aa11.36□□□□□ -0.59
USB1-214ENST00000568848 RAB12Q6IQ22 244 aa11.36□□□□□ -0.59
USB1-214ENST00000568848 C8orf59Q8N0T1 100 aaPredicted RBP11.36□□□□□ -0.59
USB1-214ENST00000568848 GPR148Q8TDV2 347 aa11.36□□□□□ -0.59
USB1-214ENST00000568848 MUL1Q969V5 352 aa11.36□□□□□ -0.59
USB1-214ENST00000568848 ABHD14AQ9BUJ0 271 aa11.36□□□□□ -0.59
USB1-214ENST00000568848 TMED9Q9BVK6 235 aa11.36□□□□□ -0.59
USB1-214ENST00000568848 TAF9BQ9HBM6 251 aa11.36□□□□□ -0.59
USB1-214ENST00000568848 OR2S2Q9NQN1 319 aa11.36□□□□□ -0.59
USB1-214ENST00000568848 FOXA2Q9Y261 457 aaPredicted RBP11.36□□□□□ -0.59
USB1-214ENST00000568848 SELENOKQ9Y6D0 94 aa11.36□□□□□ -0.59
USB1-214ENST00000568848 SAA2-SAA4A0A096LPE2 208 aa11.35□□□□□ -0.59
USB1-214ENST00000568848 A0A1W2PPK0 400 aa11.35□□□□□ -0.59
USB1-214ENST00000568848 ANKRD34BA5PLL1 514 aa11.35□□□□□ -0.59
USB1-214ENST00000568848 ST8SIA5O15466 376 aa11.35□□□□□ -0.59
USB1-214ENST00000568848 SPINT2O43291 252 aa11.35□□□□□ -0.59
USB1-214ENST00000568848 TXNL1O43396 289 aa11.35□□□□□ -0.59
USB1-214ENST00000568848 IGLV1-51P01701 117 aa11.35□□□□□ -0.59
USB1-214ENST00000568848 SAA2P0DJI9 122 aaPredicted RBP11.35□□□□□ -0.59
USB1-214ENST00000568848 VEGFCP49767 419 aa11.35□□□□□ -0.59
USB1-214ENST00000568848 LINC00205P59089 165 aa11.35□□□□□ -0.59
USB1-214ENST00000568848 RPL39P5Q59GN2 51 aa11.35□□□□□ -0.59
USB1-214ENST00000568848 NHLRC3Q5JS37 347 aa11.35□□□□□ -0.59
USB1-214ENST00000568848 ZNF485Q8NCK3 441 aa11.35□□□□□ -0.59
USB1-214ENST00000568848 TMEM106AQ96A25 262 aa11.35□□□□□ -0.59
USB1-214ENST00000568848 ZNF184Q99676 751 aaPredicted RBP11.35□□□□□ -0.59
USB1-214ENST00000568848 SPATA25Q9BR10 227 aa11.35□□□□□ -0.59
USB1-214ENST00000568848 CHCHD6Q9BRQ6 235 aa11.35□□□□□ -0.59
USB1-214ENST00000568848 CHCHD3Q9NX63 227 aaKnown RBP11.35□□□□□ -0.59
USB1-214ENST00000568848 IL36GQ9NZH8 169 aa11.35□□□□□ -0.59
USB1-214ENST00000568848 DNAH10Q8IVF4 4471 aa11.35□□□□□ -0.59
USB1-214ENST00000568848 TRAV8-7A0A075B6U6 113 aa11.34□□□□□ -0.59
USB1-214ENST00000568848 PNMA8CA0A1B0GUJ8 204 aa11.34□□□□□ -0.59
USB1-214ENST00000568848 HSPB1P04792 205 aaKnown RBP11.34□□□□□ -0.59
USB1-214ENST00000568848 DMKNQ6E0U4 476 aaPredicted RBP11.34□□□□□ -0.59
USB1-214ENST00000568848 SIGIRRQ6IA17 410 aa11.34□□□□□ -0.59
USB1-214ENST00000568848 UNQ5815/PRO19632Q6UWF5 114 aa11.34□□□□□ -0.59
USB1-214ENST00000568848 AHSA2Q719I0 299 aa11.34□□□□□ -0.59
USB1-214ENST00000568848 ANKRD13BQ86YJ7 626 aa11.34□□□□□ -0.59
USB1-214ENST00000568848 SGPP2Q8IWX5 399 aa11.34□□□□□ -0.59
USB1-214ENST00000568848 LFNGQ8NES3 379 aa11.34□□□□□ -0.59
USB1-214ENST00000568848 BPIFB6Q8NFQ5 453 aa11.34□□□□□ -0.59
USB1-214ENST00000568848 GHSRQ92847 366 aa11.34□□□□□ -0.59
USB1-214ENST00000568848 SMIM19Q96E16 107 aa11.34□□□□□ -0.59
USB1-214ENST00000568848 WFDC10AQ9H1F0 79 aa11.34□□□□□ -0.59
USB1-214ENST00000568848 GHITMQ9H3K2 345 aa11.34□□□□□ -0.59
USB1-214ENST00000568848 RCC2Q9P258 522 aaKnown RBP11.34□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms