RNA–Protein interactions for RNA: ENST00000568770.5

CDH13-211, Transcript of cadherin 13, humanhuman

TSL 4

Gene CDH13, Length 589 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13-211ENST00000568770 F2RL1P55085 397 aa4.28□□□□□ -1.72
CDH13-211ENST00000568770 MTCP1P56278 107 aa4.28□□□□□ -1.72
CDH13-211ENST00000568770 PITPNAQ00169 270 aa4.28□□□□□ -1.72
CDH13-211ENST00000568770 ZNF816Q0VGE8 651 aaPredicted RBP4.28□□□□□ -1.72
CDH13-211ENST00000568770 APOFQ13790 326 aa4.28□□□□□ -1.72
CDH13-211ENST00000568770 GINS1Q14691 196 aa4.28□□□□□ -1.72
CDH13-211ENST00000568770 TBCEQ15813 527 aaPredicted RBP4.28□□□□□ -1.72
CDH13-211ENST00000568770 Q6P435 159 aa4.28□□□□□ -1.72
CDH13-211ENST00000568770 Q6ZSR3 168 aa4.28□□□□□ -1.72
CDH13-211ENST00000568770 RPP25LQ8N5L8 163 aaKnown RBP4.28□□□□□ -1.72
CDH13-211ENST00000568770 ZNF565Q8N9K5 539 aa4.28□□□□□ -1.72
CDH13-211ENST00000568770 TMEM104Q8NE00 496 aa4.28□□□□□ -1.72
CDH13-211ENST00000568770 RFESDQ8TAC1 157 aa4.28□□□□□ -1.72
CDH13-211ENST00000568770 ASB17Q8WXJ9 295 aa4.28□□□□□ -1.72
CDH13-211ENST00000568770 NSMCE2Q96MF7 247 aa4.28□□□□□ -1.72
CDH13-211ENST00000568770 OR4C12Q96R67 309 aa4.28□□□□□ -1.72
CDH13-211ENST00000568770 APOL4Q9BPW4 351 aa4.28□□□□□ -1.72
CDH13-211ENST00000568770 TMED9Q9BVK6 235 aa4.28□□□□□ -1.72
CDH13-211ENST00000568770 OSBPL10Q9BXB5 764 aa4.28□□□□□ -1.72
CDH13-211ENST00000568770 CHST5Q9GZS9 411 aa4.28□□□□□ -1.72
CDH13-211ENST00000568770 COMMD4Q9H0A8 199 aa4.28□□□□□ -1.72
CDH13-211ENST00000568770 KRT84Q9NSB2 600 aa4.28□□□□□ -1.72
CDH13-211ENST00000568770 CHCHD3Q9NX63 227 aaKnown RBP4.28□□□□□ -1.72
CDH13-211ENST00000568770 CALYQ9NYX4 217 aa4.28□□□□□ -1.72
CDH13-211ENST00000568770 IDI2-AS1Q9NZ38 188 aa4.28□□□□□ -1.72
CDH13-211ENST00000568770 OR6C3Q9NZP0 311 aa4.28□□□□□ -1.72
CDH13-211ENST00000568770 ACTR3BQ9P1U1 418 aa4.28□□□□□ -1.72
CDH13-211ENST00000568770 AASSQ9UDR5 926 aa4.28□□□□□ -1.72
CDH13-211ENST00000568770 SNX5Q9Y5X3 404 aa4.28□□□□□ -1.72
CDH13-211ENST00000568770 WSB1Q9Y6I7 421 aa4.28□□□□□ -1.72
CDH13-211ENST00000568770 R4GMQ9 66 aa4.28□□□□□ -1.72
CDH13-211ENST00000568770 MEIKINA0A087WXM9 373 aa4.27□□□□□ -1.73
CDH13-211ENST00000568770 IGKV1-12A0A0C4DH73 117 aa4.27□□□□□ -1.73
CDH13-211ENST00000568770 FAM90A10PA6NDY2 464 aa4.27□□□□□ -1.73
CDH13-211ENST00000568770 CCDC182A6NF36 153 aa4.27□□□□□ -1.73
CDH13-211ENST00000568770 HMGB1P1B2RPK0 211 aaPredicted RBP4.27□□□□□ -1.73
CDH13-211ENST00000568770 C12orf77C9JDV5 145 aa4.27□□□□□ -1.73
CDH13-211ENST00000568770 DEGS1O15121 323 aa4.27□□□□□ -1.73
CDH13-211ENST00000568770 SYT7O43581 403 aa4.27□□□□□ -1.73
CDH13-211ENST00000568770 RPP14O95059 124 aaKnown RBP4.27□□□□□ -1.73
CDH13-211ENST00000568770 SERPINA3P01011 423 aa4.27□□□□□ -1.73
CDH13-211ENST00000568770 IGKV1D-12P01611 117 aa4.27□□□□□ -1.73
CDH13-211ENST00000568770 SLC2A2P11168 524 aaPredicted RBP4.27□□□□□ -1.73
CDH13-211ENST00000568770 HSD17B1P14061 328 aa4.27□□□□□ -1.73
CDH13-211ENST00000568770 CD1BP29016 333 aa4.27□□□□□ -1.73
CDH13-211ENST00000568770 C21orf33P30042 268 aaPredicted RBP4.27□□□□□ -1.73
CDH13-211ENST00000568770 HTR1FP30939 366 aa4.27□□□□□ -1.73
CDH13-211ENST00000568770 SSTR5P35346 364 aa4.27□□□□□ -1.73
CDH13-211ENST00000568770 MAGEA2P43356 314 aa4.27□□□□□ -1.73
CDH13-211ENST00000568770 ATP1B3P54709 279 aa4.27□□□□□ -1.73
CDH13-211ENST00000568770 CXCR4P61073 352 aa4.27□□□□□ -1.73
CDH13-211ENST00000568770 PDZK1IP1Q13113 114 aa4.27□□□□□ -1.73
CDH13-211ENST00000568770 RNLSQ5VYX0 342 aa4.27□□□□□ -1.73
CDH13-211ENST00000568770 ZNF322Q6U7Q0 402 aaPredicted RBP4.27□□□□□ -1.73
CDH13-211ENST00000568770 PGAM4Q8N0Y7 254 aa4.27□□□□□ -1.73
CDH13-211ENST00000568770 CHST4Q8NCG5 386 aa4.27□□□□□ -1.73
CDH13-211ENST00000568770 OR10G2Q8NGC3 310 aa4.27□□□□□ -1.73
CDH13-211ENST00000568770 OR8H1Q8NGG4 311 aa4.27□□□□□ -1.73
CDH13-211ENST00000568770 OR51T1Q8NGJ9 327 aa4.27□□□□□ -1.73
CDH13-211ENST00000568770 OR13A1Q8NGR1 328 aa4.27□□□□□ -1.73
CDH13-211ENST00000568770 CASTOR1Q8WTX7 329 aa4.27□□□□□ -1.73
CDH13-211ENST00000568770 RTN4IP1Q8WWV3 396 aaPredicted RBP4.27□□□□□ -1.73
CDH13-211ENST00000568770 RFT1Q96AA3 541 aa4.27□□□□□ -1.73
CDH13-211ENST00000568770 FEVQ99581 238 aa4.27□□□□□ -1.73
CDH13-211ENST00000568770 NABP2Q9BQ15 211 aa4.27□□□□□ -1.73
CDH13-211ENST00000568770 CHCHD6Q9BRQ6 235 aa4.27□□□□□ -1.73
CDH13-211ENST00000568770 TOLLIPQ9H0E2 274 aa4.27□□□□□ -1.73
CDH13-211ENST00000568770 HIPK2Q9H2X6 1198 aa4.27□□□□□ -1.73
CDH13-211ENST00000568770 TUBA4BQ9H853 241 aa4.27□□□□□ -1.73
CDH13-211ENST00000568770 LINC00574Q9H8X3 128 aa4.27□□□□□ -1.73
CDH13-211ENST00000568770 REEP1Q9H902 201 aa4.27□□□□□ -1.73
CDH13-211ENST00000568770 SCPEP1Q9HB40 452 aa4.27□□□□□ -1.73
CDH13-211ENST00000568770 ZNF107Q9UII5 783 aaPredicted RBP4.27□□□□□ -1.73
CDH13-211ENST00000568770 KIF25Q9UIL4 384 aa4.27□□□□□ -1.73
CDH13-211ENST00000568770 ZNF580Q9UK33 172 aa4.27□□□□□ -1.73
CDH13-211ENST00000568770 SAMHD1Q9Y3Z3 626 aaKnown RBP4.27□□□□□ -1.73
CDH13-211ENST00000568770 TMEM14AQ9Y6G1 99 aa4.27□□□□□ -1.73
CDH13-211ENST00000568770 TRAV39A0A0B4J263 110 aa4.26□□□□□ -1.73
CDH13-211ENST00000568770 TRAV41A0A0B4J266 112 aa4.26□□□□□ -1.73
CDH13-211ENST00000568770 IGKV1-9A0A0C4DH69 117 aa4.26□□□□□ -1.73
CDH13-211ENST00000568770 ATP6V0E1O15342 81 aa4.26□□□□□ -1.73
CDH13-211ENST00000568770 KDM4BO94953 1096 aa4.26□□□□□ -1.73
CDH13-211ENST00000568770 BRI3O95415 125 aa4.26□□□□□ -1.73
CDH13-211ENST00000568770 HMGN1P05114 100 aa4.26□□□□□ -1.73
CDH13-211ENST00000568770 NANOS2P60321 138 aaKnown RBP4.26□□□□□ -1.73
CDH13-211ENST00000568770 ACTR3P61158 418 aa4.26□□□□□ -1.73
CDH13-211ENST00000568770 CDK5Q00535 292 aa4.26□□□□□ -1.73
CDH13-211ENST00000568770 CDK5R1Q15078 307 aa4.26□□□□□ -1.73
CDH13-211ENST00000568770 TMEM236Q5W0B7 351 aa4.26□□□□□ -1.73
CDH13-211ENST00000568770 OR2T5Q6IEZ7 315 aa4.26□□□□□ -1.73
CDH13-211ENST00000568770 SLC35F2Q8IXU6 374 aa4.26□□□□□ -1.73
CDH13-211ENST00000568770 YIPF7Q8N8F6 280 aa4.26□□□□□ -1.73
CDH13-211ENST00000568770 MINDY2Q8NBR6 621 aa4.26□□□□□ -1.73
CDH13-211ENST00000568770 OR5D18Q8NGL1 313 aa4.26□□□□□ -1.73
CDH13-211ENST00000568770 OR2T29Q8NH02 315 aa4.26□□□□□ -1.73
CDH13-211ENST00000568770 MRGPRDQ8TDS7 321 aa4.26□□□□□ -1.73
CDH13-211ENST00000568770 GATAD1Q8WUU5 269 aa4.26□□□□□ -1.73
CDH13-211ENST00000568770 PP6455Q8WZ26 134 aa4.26□□□□□ -1.73
CDH13-211ENST00000568770 CMTM5Q96DZ9 223 aa4.26□□□□□ -1.73
CDH13-211ENST00000568770 SPACA5Q96QH8 159 aa4.26□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 51.5 ms