RNA–Protein interactions for RNA: ENST00000568676.5

HERPUD1-215, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 2

Gene HERPUD1, Length 571 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-215ENST00000568676 EI24O14681 340 aa12.14□□□□□ -0.47
HERPUD1-215ENST00000568676 YPEL1O60688 119 aa12.14□□□□□ -0.47
HERPUD1-215ENST00000568676 GPX5O75715 221 aa12.14□□□□□ -0.47
HERPUD1-215ENST00000568676 IGHV4-30-4P0DP06 118 aa12.14□□□□□ -0.47
HERPUD1-215ENST00000568676 GTF2A1P52655 376 aaPredicted RBP12.14□□□□□ -0.47
HERPUD1-215ENST00000568676 SRSF7Q16629 238 aaKnown RBP eCLIP12.14□□□□□ -0.47
HERPUD1-215ENST00000568676 ZFAND6Q6FIF0 208 aa12.14□□□□□ -0.47
HERPUD1-215ENST00000568676 CD200R1LQ6Q8B3 271 aa12.14□□□□□ -0.47
HERPUD1-215ENST00000568676 ZNF833PQ6ZTB9 187 aa12.14□□□□□ -0.47
HERPUD1-215ENST00000568676 CDH26Q8IXH8 852 aa12.14□□□□□ -0.47
HERPUD1-215ENST00000568676 OR52I1Q8NGK6 324 aa12.14□□□□□ -0.47
HERPUD1-215ENST00000568676 OR1L1Q8NH94 360 aa12.14□□□□□ -0.47
HERPUD1-215ENST00000568676 RHOXF1Q8NHV9 184 aa12.14□□□□□ -0.47
HERPUD1-215ENST00000568676 YPEL2Q96QA6 119 aa12.14□□□□□ -0.47
HERPUD1-215ENST00000568676 SPATA25Q9BR10 227 aa12.14□□□□□ -0.47
HERPUD1-215ENST00000568676 SLA2Q9H6Q3 261 aa12.14□□□□□ -0.47
HERPUD1-215ENST00000568676 C19orf73Q9NVV2 129 aa12.14□□□□□ -0.47
HERPUD1-215ENST00000568676 PEX16Q9Y5Y5 336 aa12.14□□□□□ -0.47
HERPUD1-215ENST00000568676 EPPK1P58107 5090 aaKnown RBP12.13□□□□□ -0.47
HERPUD1-215ENST00000568676 BIRC6Q9NR09 4857 aa12.13□□□□□ -0.47
HERPUD1-215ENST00000568676 IGHV4OR15-8A0A075B7B6 117 aa12.13□□□□□ -0.47
HERPUD1-215ENST00000568676 A0A087WW49 117 aa12.13□□□□□ -0.47
HERPUD1-215ENST00000568676 IGFBP3P17936 291 aaPredicted RBP12.13□□□□□ -0.47
HERPUD1-215ENST00000568676 RCC1P18754 421 aaPredicted RBP12.13□□□□□ -0.47
HERPUD1-215ENST00000568676 ECSCRQ19T08 205 aa12.13□□□□□ -0.47
HERPUD1-215ENST00000568676 TMPRSS11AQ6ZMR5 421 aa12.13□□□□□ -0.47
HERPUD1-215ENST00000568676 ODF3L1Q8IXM7 274 aa12.13□□□□□ -0.47
HERPUD1-215ENST00000568676 GALMQ96C23 342 aa12.13□□□□□ -0.47
HERPUD1-215ENST00000568676 MRPL20Q9BYC9 149 aaKnown RBP12.13□□□□□ -0.47
HERPUD1-215ENST00000568676 ALX4Q9H161 411 aaPredicted RBP12.13□□□□□ -0.47
HERPUD1-215ENST00000568676 NUBP2Q9Y5Y2 271 aa12.13□□□□□ -0.47
HERPUD1-215ENST00000568676 DNAH1Q9P2D7 4330 aa12.13□□□□□ -0.47
HERPUD1-215ENST00000568676 A0A1W2PP11 408 aa12.12□□□□□ -0.47
HERPUD1-215ENST00000568676 SOX15O60248 233 aa12.12□□□□□ -0.47
HERPUD1-215ENST00000568676 CIB2O75838 187 aa12.12□□□□□ -0.47
HERPUD1-215ENST00000568676 IGLV1-51P01701 117 aa12.12□□□□□ -0.47
HERPUD1-215ENST00000568676 LIMS3P0CW19 117 aa12.12□□□□□ -0.47
HERPUD1-215ENST00000568676 LIMS4P0CW20 117 aa12.12□□□□□ -0.47
HERPUD1-215ENST00000568676 FUT3P21217 361 aa12.12□□□□□ -0.47
HERPUD1-215ENST00000568676 CNTFRP26992 372 aa12.12□□□□□ -0.47
HERPUD1-215ENST00000568676 ADARB1P78563 741 aaKnown RBP12.12□□□□□ -0.47
HERPUD1-215ENST00000568676 ZIK1Q3SY52 487 aaPredicted RBP12.12□□□□□ -0.47
HERPUD1-215ENST00000568676 AKIRIN2Q53H80 203 aa12.12□□□□□ -0.47
HERPUD1-215ENST00000568676 ANKRD13BQ86YJ7 626 aa12.12□□□□□ -0.47
HERPUD1-215ENST00000568676 Q8N1Y9 231 aa12.12□□□□□ -0.47
HERPUD1-215ENST00000568676 OR2AK2Q8NG84 335 aa12.12□□□□□ -0.47
HERPUD1-215ENST00000568676 IL17DQ8TAD2 202 aa12.12□□□□□ -0.47
HERPUD1-215ENST00000568676 SMIM19Q96E16 107 aa12.12□□□□□ -0.47
HERPUD1-215ENST00000568676 RITA1Q96K30 269 aa12.12□□□□□ -0.47
HERPUD1-215ENST00000568676 AMBNQ9NP70 447 aa12.12□□□□□ -0.47
HERPUD1-215ENST00000568676 GAR1Q9NY12 217 aaKnown RBP12.12□□□□□ -0.47
HERPUD1-215ENST00000568676 PIPOXQ9P0Z9 390 aa12.12□□□□□ -0.47
HERPUD1-215ENST00000568676 LYSTQ99698 3801 aa12.12□□□□□ -0.47
HERPUD1-215ENST00000568676 OR5H14A6NHG9 310 aa12.11□□□□□ -0.47
HERPUD1-215ENST00000568676 RRHO14718 337 aa12.11□□□□□ -0.47
HERPUD1-215ENST00000568676 OGG1O15527 345 aa12.11□□□□□ -0.47
HERPUD1-215ENST00000568676 RBBP9O75884 186 aa12.11□□□□□ -0.47
HERPUD1-215ENST00000568676 JTBO76095 146 aa12.11□□□□□ -0.47
HERPUD1-215ENST00000568676 IFNA6P05013 189 aa12.11□□□□□ -0.47
HERPUD1-215ENST00000568676 FSTP19883 344 aa12.11□□□□□ -0.47
HERPUD1-215ENST00000568676 DCKP27707 260 aa12.11□□□□□ -0.47
HERPUD1-215ENST00000568676 MC5RP33032 325 aa12.11□□□□□ -0.47
HERPUD1-215ENST00000568676 CX3CL1P78423 397 aa12.11□□□□□ -0.47
HERPUD1-215ENST00000568676 PLGLAQ15195 96 aa12.11□□□□□ -0.47
HERPUD1-215ENST00000568676 GLIPR1L1Q6UWM5 242 aa12.11□□□□□ -0.47
HERPUD1-215ENST00000568676 RDH12Q96NR8 316 aa12.11□□□□□ -0.47
HERPUD1-215ENST00000568676 RNF5Q99942 180 aa12.11□□□□□ -0.47
HERPUD1-215ENST00000568676 FGF20Q9NP95 211 aaPredicted RBP12.11□□□□□ -0.47
HERPUD1-215ENST00000568676 AASSQ9UDR5 926 aa12.11□□□□□ -0.47
HERPUD1-215ENST00000568676 SAA2-SAA4A0A096LPE2 208 aa12.1□□□□□ -0.47
HERPUD1-215ENST00000568676 TRBV5-5A0A0J9YX44 114 aa12.1□□□□□ -0.47
HERPUD1-215ENST00000568676 IRGMA1A4Y4 181 aa12.1□□□□□ -0.47
HERPUD1-215ENST00000568676 H0Y980 276 aa12.1□□□□□ -0.47
HERPUD1-215ENST00000568676 MAS1P04201 325 aa12.1□□□□□ -0.47
HERPUD1-215ENST00000568676 TFAP2AP05549 437 aa12.1□□□□□ -0.47
HERPUD1-215ENST00000568676 SAA2P0DJI9 122 aaPredicted RBP12.1□□□□□ -0.47
HERPUD1-215ENST00000568676 MGMTP16455 207 aa12.1□□□□□ -0.47
HERPUD1-215ENST00000568676 ZP3P21754 424 aa12.1□□□□□ -0.47
HERPUD1-215ENST00000568676 PPP1CCP36873 323 aaKnown RBP12.1□□□□□ -0.47
HERPUD1-215ENST00000568676 NDPQ00604 133 aa12.1□□□□□ -0.47
HERPUD1-215ENST00000568676 GNMTQ14749 295 aa12.1□□□□□ -0.47
HERPUD1-215ENST00000568676 MOGAT2Q3SYC2 334 aa12.1□□□□□ -0.47
HERPUD1-215ENST00000568676 Q499Y3 187 aa12.1□□□□□ -0.47
HERPUD1-215ENST00000568676 ACTBL2Q562R1 376 aa12.1□□□□□ -0.47
HERPUD1-215ENST00000568676 YIF1BQ5BJH7 314 aa12.1□□□□□ -0.47
HERPUD1-215ENST00000568676 AWAT2Q6E213 333 aa12.1□□□□□ -0.47
HERPUD1-215ENST00000568676 XAF1Q6GPH4 301 aa12.1□□□□□ -0.47
HERPUD1-215ENST00000568676 JAGN1Q8N5M9 183 aa12.1□□□□□ -0.47
HERPUD1-215ENST00000568676 OR52L2PQ8NGH6 319 aa12.1□□□□□ -0.47
HERPUD1-215ENST00000568676 RBMXL1Q96E39 390 aaKnown RBP12.1□□□□□ -0.47
HERPUD1-215ENST00000568676 RHOVQ96L33 236 aa12.1□□□□□ -0.47
HERPUD1-215ENST00000568676 RANGRFQ9HD47 186 aaPredicted RBP12.1□□□□□ -0.47
HERPUD1-215ENST00000568676 BABAM2Q9NXR7 383 aa12.1□□□□□ -0.47
HERPUD1-215ENST00000568676 STEAP1Q9UHE8 339 aa12.1□□□□□ -0.47
HERPUD1-215ENST00000568676 FBXO7Q9Y3I1 522 aa12.1□□□□□ -0.47
HERPUD1-215ENST00000568676 RAB29O14966 203 aa12.09□□□□□ -0.47
HERPUD1-215ENST00000568676 PDCD6O75340 191 aa12.09□□□□□ -0.47
HERPUD1-215ENST00000568676 TPPP2P59282 170 aa12.09□□□□□ -0.47
HERPUD1-215ENST00000568676 LRRC36Q1X8D7 754 aa12.09□□□□□ -0.47
HERPUD1-215ENST00000568676 ZFP1Q6P2D0 407 aa12.09□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms