RNA–Protein interactions for RNA: ENST00000568499.1

KLHDC4-223, Transcript of kelch domain containing 4, human

TSL 3

Gene KLHDC4, Length 445 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
KLHDC4-223	ENST00000568499	MTFP1	Q9UDX5	166 aa		12.12	□□□□□ -0.47
KLHDC4-223	ENST00000568499	RBM7	Q9Y580	266 aa	Known RBP	12.12	□□□□□ -0.47
KLHDC4-223	ENST00000568499	BUB1B-PAK6	H3BSN5	160 aa		12.11	□□□□□ -0.47
KLHDC4-223	ENST00000568499	ITGB1BP1	O14713	200 aa		12.11	□□□□□ -0.47
KLHDC4-223	ENST00000568499	IGLV1-47	P01700	117 aa		12.11	□□□□□ -0.47
KLHDC4-223	ENST00000568499	FCER2	P06734	321 aa		12.11	□□□□□ -0.47
KLHDC4-223	ENST00000568499	NAT1	P18440	290 aa		12.11	□□□□□ -0.47
KLHDC4-223	ENST00000568499	ZNF45	Q02386	682 aa		12.11	□□□□□ -0.47
KLHDC4-223	ENST00000568499	GNMT	Q14749	295 aa		12.11	□□□□□ -0.47
KLHDC4-223	ENST00000568499	CCDC144NL	Q6NUI1	221 aa		12.11	□□□□□ -0.47
KLHDC4-223	ENST00000568499	SLC25A48	Q6ZT89	311 aa	Known RBP	12.11	□□□□□ -0.47
KLHDC4-223	ENST00000568499	PIP4P2	Q8N4L2	257 aa		12.11	□□□□□ -0.47
KLHDC4-223	ENST00000568499	SMIM4	Q8WVI0	70 aa		12.11	□□□□□ -0.47
KLHDC4-223	ENST00000568499	C22orf15	Q8WYQ4	148 aa		12.11	□□□□□ -0.47
KLHDC4-223	ENST00000568499	RPE	Q96AT9	228 aa		12.11	□□□□□ -0.47
KLHDC4-223	ENST00000568499	SOST	Q9BQB4	213 aa		12.11	□□□□□ -0.47
KLHDC4-223	ENST00000568499	RDH8	Q9NYR8	311 aa		12.11	□□□□□ -0.47
KLHDC4-223	ENST00000568499	OR1A1	Q9P1Q5	309 aa		12.11	□□□□□ -0.47
KLHDC4-223	ENST00000568499	ANAPC10	Q9UM13	185 aa		12.11	□□□□□ -0.47
KLHDC4-223	ENST00000568499	SON	P18583	2426 aa	Known RBP	12.11	□□□□□ -0.47
KLHDC4-223	ENST00000568499	IGKV1D-8	A0A087WSZ0	117 aa		12.1	□□□□□ -0.47
KLHDC4-223	ENST00000568499	IGKV1-6	A0A0C4DH72	117 aa		12.1	□□□□□ -0.47
KLHDC4-223	ENST00000568499		A0A0U1RQK1	487 aa		12.1	□□□□□ -0.47
KLHDC4-223	ENST00000568499	OOSP1	A8MZH6	123 aa		12.1	□□□□□ -0.47
KLHDC4-223	ENST00000568499	ZNF736	B4DX44	427 aa	Predicted RBP	12.1	□□□□□ -0.47
KLHDC4-223	ENST00000568499	GSTZ1	O43708	216 aa	Predicted RBP	12.1	□□□□□ -0.47
KLHDC4-223	ENST00000568499	TBP	P20226	339 aa		12.1	□□□□□ -0.47
KLHDC4-223	ENST00000568499	HERPUD1	Q15011	391 aa		12.1	□□□□□ -0.47
KLHDC4-223	ENST00000568499	CDK10	Q15131	360 aa		12.1	□□□□□ -0.47
KLHDC4-223	ENST00000568499	C5orf24	Q7Z6I8	188 aa		12.1	□□□□□ -0.47
KLHDC4-223	ENST00000568499	OR4P4	Q8NGL7	312 aa		12.1	□□□□□ -0.47
KLHDC4-223	ENST00000568499	S100Z	Q8WXG8	99 aa		12.1	□□□□□ -0.47
KLHDC4-223	ENST00000568499	JMJD8	Q96S16	334 aa		12.1	□□□□□ -0.47
KLHDC4-223	ENST00000568499	TOLLIP	Q9H0E2	274 aa		12.1	□□□□□ -0.47
KLHDC4-223	ENST00000568499	PIPOX	Q9P0Z9	390 aa		12.1	□□□□□ -0.47
KLHDC4-223	ENST00000568499	KLK11	Q9UBX7	282 aa		12.1	□□□□□ -0.47
KLHDC4-223	ENST00000568499	ZNF107	Q9UII5	783 aa	Predicted RBP	12.1	□□□□□ -0.47
KLHDC4-223	ENST00000568499	ZNF221	Q9UK13	617 aa		12.1	□□□□□ -0.47
KLHDC4-223	ENST00000568499	NAV3	Q8IVL0	2385 aa		12.1	□□□□□ -0.47
KLHDC4-223	ENST00000568499	MTOR	P42345	2549 aa		12.09	□□□□□ -0.47
KLHDC4-223	ENST00000568499		A0A1W2PPE3	182 aa		12.09	□□□□□ -0.47
KLHDC4-223	ENST00000568499	BTBD17	A6NE02	478 aa		12.09	□□□□□ -0.47
KLHDC4-223	ENST00000568499	IFNA6	P05013	189 aa		12.09	□□□□□ -0.47
KLHDC4-223	ENST00000568499	CSF1	P09603	554 aa		12.09	□□□□□ -0.47
KLHDC4-223	ENST00000568499	OR5H8	P0DN80	308 aa		12.09	□□□□□ -0.47
KLHDC4-223	ENST00000568499	HLA-DMA	P28067	261 aa		12.09	□□□□□ -0.47
KLHDC4-223	ENST00000568499	TAS2R19	P59542	299 aa		12.09	□□□□□ -0.47
KLHDC4-223	ENST00000568499	DGCR2	P98153	550 aa		12.09	□□□□□ -0.47
KLHDC4-223	ENST00000568499	SSX2	Q16385	188 aa		12.09	□□□□□ -0.47
KLHDC4-223	ENST00000568499	DEFB112	Q30KQ8	113 aa		12.09	□□□□□ -0.47
KLHDC4-223	ENST00000568499	CT45A1	Q5HYN5	189 aa		12.09	□□□□□ -0.47
KLHDC4-223	ENST00000568499	TMEM17	Q86X19	198 aa		12.09	□□□□□ -0.47
KLHDC4-223	ENST00000568499	BCL6B	Q8N143	479 aa	Predicted RBP	12.09	□□□□□ -0.47
KLHDC4-223	ENST00000568499	LYG1	Q8N1E2	194 aa		12.09	□□□□□ -0.47
KLHDC4-223	ENST00000568499		Q8N402	240 aa		12.09	□□□□□ -0.47
KLHDC4-223	ENST00000568499	ZNF439	Q8NDP4	499 aa		12.09	□□□□□ -0.47
KLHDC4-223	ENST00000568499	CT45A3	Q8NHU0	189 aa		12.09	□□□□□ -0.47
KLHDC4-223	ENST00000568499	SNAPC3	Q92966	411 aa		12.09	□□□□□ -0.47
KLHDC4-223	ENST00000568499	TOMM40L	Q969M1	308 aa		12.09	□□□□□ -0.47
KLHDC4-223	ENST00000568499	S1PR3	Q99500	378 aa		12.09	□□□□□ -0.47
KLHDC4-223	ENST00000568499	SLC6A7	Q99884	636 aa		12.09	□□□□□ -0.47
KLHDC4-223	ENST00000568499	ABCB10	Q9NRK6	738 aa		12.09	□□□□□ -0.47
KLHDC4-223	ENST00000568499	EHF	Q9NZC4	300 aa		12.09	□□□□□ -0.47
KLHDC4-223	ENST00000568499	HILPDA	Q9Y5L2	63 aa		12.09	□□□□□ -0.47
KLHDC4-223	ENST00000568499		V9GYH0	126 aa		12.09	□□□□□ -0.47
KLHDC4-223	ENST00000568499	RAB29	O14966	203 aa		12.08	□□□□□ -0.48
KLHDC4-223	ENST00000568499	TXNL1	O43396	289 aa		12.08	□□□□□ -0.48
KLHDC4-223	ENST00000568499	SLC22A5	O76082	557 aa		12.08	□□□□□ -0.48
KLHDC4-223	ENST00000568499	PMP2	P02689	132 aa		12.08	□□□□□ -0.48
KLHDC4-223	ENST00000568499	GAPDH	P04406	335 aa	Known RBP	12.08	□□□□□ -0.48
KLHDC4-223	ENST00000568499	BRS3	P32247	399 aa		12.08	□□□□□ -0.48
KLHDC4-223	ENST00000568499	INPP1	P49441	399 aa		12.08	□□□□□ -0.48
KLHDC4-223	ENST00000568499	LUM	P51884	338 aa	Predicted RBP	12.08	□□□□□ -0.48
KLHDC4-223	ENST00000568499	ZNF134	P52741	427 aa		12.08	□□□□□ -0.48
KLHDC4-223	ENST00000568499	AP3S2	P59780	193 aa		12.08	□□□□□ -0.48
KLHDC4-223	ENST00000568499	TSPAN5	P62079	268 aa		12.08	□□□□□ -0.48
KLHDC4-223	ENST00000568499	RNASE10	Q5GAN6	216 aa	Known RBP	12.08	□□□□□ -0.48
KLHDC4-223	ENST00000568499	TPTE2P1	Q5T6R2	138 aa		12.08	□□□□□ -0.48
KLHDC4-223	ENST00000568499	LHFPL4	Q7Z7J7	247 aa		12.08	□□□□□ -0.48
KLHDC4-223	ENST00000568499	H1FOO	Q8IZA3	346 aa	Predicted RBP	12.08	□□□□□ -0.48
KLHDC4-223	ENST00000568499	GDPD1	Q8N9F7	314 aa		12.08	□□□□□ -0.48
KLHDC4-223	ENST00000568499	TMEM229B	Q8NBD8	167 aa		12.08	□□□□□ -0.48
KLHDC4-223	ENST00000568499	THAP7	Q9BT49	309 aa	Predicted RBP	12.08	□□□□□ -0.48
KLHDC4-223	ENST00000568499	C11orf54	Q9H0W9	315 aa	Predicted RBP	12.08	□□□□□ -0.48
KLHDC4-223	ENST00000568499	MEGF9	Q9H1U4	602 aa		12.08	□□□□□ -0.48
KLHDC4-223	ENST00000568499	DPAGT1	Q9H3H5	408 aa		12.08	□□□□□ -0.48
KLHDC4-223	ENST00000568499	OR2W1	Q9Y3N9	320 aa		12.08	□□□□□ -0.48
KLHDC4-223	ENST00000568499		A0A0A6YYJ9	748 aa		12.07	□□□□□ -0.48
KLHDC4-223	ENST00000568499	SLC31A2	O15432	143 aa		12.07	□□□□□ -0.48
KLHDC4-223	ENST00000568499	ST8SIA5	O15466	376 aa		12.07	□□□□□ -0.48
KLHDC4-223	ENST00000568499	NFYA	P23511	347 aa	Predicted RBP	12.07	□□□□□ -0.48
KLHDC4-223	ENST00000568499	FCGR2C	P31995	323 aa		12.07	□□□□□ -0.48
KLHDC4-223	ENST00000568499	HRH1	P35367	487 aa		12.07	□□□□□ -0.48
KLHDC4-223	ENST00000568499	GPR12	P47775	334 aa		12.07	□□□□□ -0.48
KLHDC4-223	ENST00000568499	HERV-K104	P61576	105 aa		12.07	□□□□□ -0.48
KLHDC4-223	ENST00000568499	BAMBI	Q13145	260 aa		12.07	□□□□□ -0.48
KLHDC4-223	ENST00000568499	DYRK1A	Q13627	763 aa		12.07	□□□□□ -0.48
KLHDC4-223	ENST00000568499	AANAT	Q16613	207 aa		12.07	□□□□□ -0.48
KLHDC4-223	ENST00000568499	UTF1	Q5T230	341 aa		12.07	□□□□□ -0.48
KLHDC4-223	ENST00000568499	FAM53A	Q6NSI3	398 aa	Predicted RBP	12.07	□□□□□ -0.48

Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms