RNA–Protein interactions for RNA: ENST00000568038.1

SMG1-214, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 2

Gene SMG1, Length 1,210 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-214ENST00000568038 IGHV3-7P01780 117 aa6.32□□□□□ -1.4
SMG1-214ENST00000568038 PMP2P02689 132 aa6.32□□□□□ -1.4
SMG1-214ENST00000568038 IGHV3-43DP0DP04 118 aa6.32□□□□□ -1.4
SMG1-214ENST00000568038 CD99P14209 185 aa6.32□□□□□ -1.4
SMG1-214ENST00000568038 HLA-DMAP28067 261 aa6.32□□□□□ -1.4
SMG1-214ENST00000568038 RCVRNP35243 200 aa6.32□□□□□ -1.4
SMG1-214ENST00000568038 KIR2DS4P43632 304 aa6.32□□□□□ -1.4
SMG1-214ENST00000568038 ARPC4P59998 168 aa6.32□□□□□ -1.4
SMG1-214ENST00000568038 PAX8Q06710 450 aa6.32□□□□□ -1.4
SMG1-214ENST00000568038 ZNF846Q147U1 533 aa6.32□□□□□ -1.4
SMG1-214ENST00000568038 KIR2DS1Q14954 304 aa6.32□□□□□ -1.4
SMG1-214ENST00000568038 BAK1Q16611 211 aa6.32□□□□□ -1.4
SMG1-214ENST00000568038 CHRFAM7AQ494W8 412 aa6.32□□□□□ -1.4
SMG1-214ENST00000568038 IGSF11Q5DX21 431 aa6.32□□□□□ -1.4
SMG1-214ENST00000568038 METTL11BQ5VVY1 283 aa6.32□□□□□ -1.4
SMG1-214ENST00000568038 FAM53AQ6NSI3 398 aaPredicted RBP6.32□□□□□ -1.4
SMG1-214ENST00000568038 LYSMD2Q8IV50 215 aa6.32□□□□□ -1.4
SMG1-214ENST00000568038 C11orf42Q8N5U0 333 aa6.32□□□□□ -1.4
SMG1-214ENST00000568038 Q8N7P7 452 aa6.32□□□□□ -1.4
SMG1-214ENST00000568038 GDPD1Q8N9F7 314 aa6.32□□□□□ -1.4
SMG1-214ENST00000568038 OR52L2PQ8NGH6 319 aa6.32□□□□□ -1.4
SMG1-214ENST00000568038 SNAPC3Q92966 411 aa6.32□□□□□ -1.4
SMG1-214ENST00000568038 GALMQ96C23 342 aa6.32□□□□□ -1.4
SMG1-214ENST00000568038 TSC22D3Q99576 134 aa6.32□□□□□ -1.4
SMG1-214ENST00000568038 SDHCQ99643 169 aaPredicted RBP6.32□□□□□ -1.4
SMG1-214ENST00000568038 PCGF1Q9BSM1 259 aa6.32□□□□□ -1.4
SMG1-214ENST00000568038 THAP7Q9BT49 309 aaPredicted RBP6.32□□□□□ -1.4
SMG1-214ENST00000568038 SUCNR1Q9BXA5 334 aa6.32□□□□□ -1.4
SMG1-214ENST00000568038 WDR12Q9GZL7 423 aaKnown RBP6.32□□□□□ -1.4
SMG1-214ENST00000568038 SIRT7Q9NRC8 400 aa6.32□□□□□ -1.4
SMG1-214ENST00000568038 IDI2-AS1Q9NZ38 188 aa6.32□□□□□ -1.4
SMG1-214ENST00000568038 MTFP1Q9UDX5 166 aa6.32□□□□□ -1.4
SMG1-214ENST00000568038 OPN4Q9UHM6 478 aa6.32□□□□□ -1.4
SMG1-214ENST00000568038 KPTNQ9Y664 436 aa6.32□□□□□ -1.4
SMG1-214ENST00000568038 AUP1Q9Y679 476 aa6.32□□□□□ -1.4
SMG1-214ENST00000568038 UNC79Q9P2D8 2635 aa6.32□□□□□ -1.4
SMG1-214ENST00000568038 APCP25054 2843 aa6.32□□□□□ -1.4
SMG1-214ENST00000568038 IGHV3OR16-10A0A075B7F0 116 aa6.31□□□□□ -1.4
SMG1-214ENST00000568038 IGKV1-6A0A0C4DH72 117 aa6.31□□□□□ -1.4
SMG1-214ENST00000568038 A0A1W2PRD5 423 aa6.31□□□□□ -1.4
SMG1-214ENST00000568038 A0A1W2PRF3 423 aa6.31□□□□□ -1.4
SMG1-214ENST00000568038 A0A1W2PRM7 423 aa6.31□□□□□ -1.4
SMG1-214ENST00000568038 NPIPB11E5RHQ5 1161 aa6.31□□□□□ -1.4
SMG1-214ENST00000568038 M0QYG6 137 aa6.31□□□□□ -1.4
SMG1-214ENST00000568038 HSPA12AO43301 675 aa6.31□□□□□ -1.4
SMG1-214ENST00000568038 IGHV1-8P0DP01 117 aa6.31□□□□□ -1.4
SMG1-214ENST00000568038 GATA3P23771 443 aa6.31□□□□□ -1.4
SMG1-214ENST00000568038 COX7A1P24310 79 aa6.31□□□□□ -1.4
SMG1-214ENST00000568038 OR3A3P47888 321 aa6.31□□□□□ -1.4
SMG1-214ENST00000568038 INPP1P49441 399 aa6.31□□□□□ -1.4
SMG1-214ENST00000568038 PPP5CP53041 499 aa6.31□□□□□ -1.4
SMG1-214ENST00000568038 ACTBP60709 375 aa6.31□□□□□ -1.4
SMG1-214ENST00000568038 ACTG1P63261 375 aa6.31□□□□□ -1.4
SMG1-214ENST00000568038 KLRD1Q13241 179 aa6.31□□□□□ -1.4
SMG1-214ENST00000568038 GNMTQ14749 295 aa6.31□□□□□ -1.4
SMG1-214ENST00000568038 HERPUD1Q15011 391 aa6.31□□□□□ -1.4
SMG1-214ENST00000568038 SRSF7Q16629 238 aaKnown RBP eCLIP6.31□□□□□ -1.4
SMG1-214ENST00000568038 UTF1Q5T230 341 aa6.31□□□□□ -1.4
SMG1-214ENST00000568038 TRIQKQ629K1 86 aa6.31□□□□□ -1.4
SMG1-214ENST00000568038 HEPN1Q6WQI6 88 aa6.31□□□□□ -1.4
SMG1-214ENST00000568038 Q6ZS49 121 aa6.31□□□□□ -1.4
SMG1-214ENST00000568038 VMO1Q7Z5L0 202 aa6.31□□□□□ -1.4
SMG1-214ENST00000568038 ZNF554Q86TJ5 538 aa6.31□□□□□ -1.4
SMG1-214ENST00000568038 LDLRAD3Q86YD5 345 aa6.31□□□□□ -1.4
SMG1-214ENST00000568038 PDZD9Q8IXQ8 264 aa6.31□□□□□ -1.4
SMG1-214ENST00000568038 KIR3DL3Q8N743 410 aa6.31□□□□□ -1.4
SMG1-214ENST00000568038 OR10V1Q8NGI7 309 aa6.31□□□□□ -1.4
SMG1-214ENST00000568038 OR4A4PQ8NGN8 299 aa6.31□□□□□ -1.4
SMG1-214ENST00000568038 OR5H2Q8NGV7 314 aa6.31□□□□□ -1.4
SMG1-214ENST00000568038 LEAP2Q969E1 77 aa6.31□□□□□ -1.4
SMG1-214ENST00000568038 TBX15Q96SF7 602 aa6.31□□□□□ -1.4
SMG1-214ENST00000568038 SMR3AQ99954 134 aa6.31□□□□□ -1.4
SMG1-214ENST00000568038 SIRPDQ9H106 197 aa6.31□□□□□ -1.4
SMG1-214ENST00000568038 METTL8Q9H825 291 aaKnown RBP6.31□□□□□ -1.4
SMG1-214ENST00000568038 RAB9BQ9NP90 201 aa6.31□□□□□ -1.4
SMG1-214ENST00000568038 OR2S2Q9NQN1 319 aa6.31□□□□□ -1.4
SMG1-214ENST00000568038 YAE1D1Q9NRH1 226 aa6.31□□□□□ -1.4
SMG1-214ENST00000568038 OR1A1Q9P1Q5 309 aa6.31□□□□□ -1.4
SMG1-214ENST00000568038 GNG12Q9UBI6 72 aa6.31□□□□□ -1.4
SMG1-214ENST00000568038 SLC23A1Q9UHI7 598 aa6.31□□□□□ -1.4
SMG1-214ENST00000568038 ANXA10Q9UJ72 324 aa6.31□□□□□ -1.4
SMG1-214ENST00000568038 KCNS2Q9ULS6 477 aa6.31□□□□□ -1.4
SMG1-214ENST00000568038 ANAPC10Q9UM13 185 aa6.31□□□□□ -1.4
SMG1-214ENST00000568038 SESN1Q9Y6P5 492 aa6.31□□□□□ -1.4
SMG1-214ENST00000568038 NBPF19A0A087WUL8 3843 aa6.31□□□□□ -1.4
SMG1-214ENST00000568038 CCDC168Q8NDH2 2452 aa6.31□□□□□ -1.4
SMG1-214ENST00000568038 WNK2Q9Y3S1 2297 aa6.3□□□□□ -1.4
SMG1-214ENST00000568038 PDZD2O15018 2839 aa6.3□□□□□ -1.4
SMG1-214ENST00000568038 A0A0A6YYJ9 748 aa6.3□□□□□ -1.4
SMG1-214ENST00000568038 LINC00854A0A1B0GVQ3 168 aa6.3□□□□□ -1.4
SMG1-214ENST00000568038 A0A1W2PPE3 182 aa6.3□□□□□ -1.4
SMG1-214ENST00000568038 ZNF736B4DX44 427 aaPredicted RBP6.3□□□□□ -1.4
SMG1-214ENST00000568038 F2RL2O00254 374 aa6.3□□□□□ -1.4
SMG1-214ENST00000568038 CD5LO43866 347 aa6.3□□□□□ -1.4
SMG1-214ENST00000568038 LY6G6DO95868 133 aa6.3□□□□□ -1.4
SMG1-214ENST00000568038 RBP4P02753 201 aa6.3□□□□□ -1.4
SMG1-214ENST00000568038 CD3DP04234 171 aa6.3□□□□□ -1.4
SMG1-214ENST00000568038 MMP9P14780 707 aa6.3□□□□□ -1.4
SMG1-214ENST00000568038 PRTN3P24158 256 aa6.3□□□□□ -1.4
SMG1-214ENST00000568038 CD40LGP29965 261 aa6.3□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms