RNA–Protein interactions for RNA: ENST00000566915.5

LPCAT2-208, Transcript of lysophosphatidylcholine acyltransferase 2, humanhuman

TSL 1 (best)

Gene LPCAT2, Length 5,285 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LPCAT2-208ENST00000566915 GNB1P62873 340 aa3.78□□□□□ -1.8
LPCAT2-208ENST00000566915 TNFAIP6P98066 277 aaPredicted RBP3.78□□□□□ -1.8
LPCAT2-208ENST00000566915 KCNMB1Q16558 191 aa3.78□□□□□ -1.8
LPCAT2-208ENST00000566915 C10orf128Q5T292 105 aa3.78□□□□□ -1.8
LPCAT2-208ENST00000566915 C10orf113Q5VZT2 155 aa3.78□□□□□ -1.8
LPCAT2-208ENST00000566915 ACSM6Q6P461 480 aa3.78□□□□□ -1.8
LPCAT2-208ENST00000566915 C16orf82Q7Z2V1 217 aa3.78□□□□□ -1.8
LPCAT2-208ENST00000566915 CYB561D1Q8N8Q1 229 aa3.78□□□□□ -1.8
LPCAT2-208ENST00000566915 WDR31Q8NA23 367 aa3.78□□□□□ -1.8
LPCAT2-208ENST00000566915 OR11H4Q8NGC9 324 aa3.78□□□□□ -1.8
LPCAT2-208ENST00000566915 OR2I1PQ8NGU4 316 aa3.78□□□□□ -1.8
LPCAT2-208ENST00000566915 TAF15Q92804 592 aaKnown RBP eCLIP3.78□□□□□ -1.8
LPCAT2-208ENST00000566915 WFIKKN1Q96NZ8 548 aa3.78□□□□□ -1.8
LPCAT2-208ENST00000566915 TLNRD1Q9H1K6 362 aa3.78□□□□□ -1.8
LPCAT2-208ENST00000566915 GNB4Q9HAV0 340 aa3.78□□□□□ -1.8
LPCAT2-208ENST00000566915 A0A0B4J293 547 aa3.78□□□□□ -1.81
LPCAT2-208ENST00000566915 MS4A18H0YCH9 400 aa3.78□□□□□ -1.81
LPCAT2-208ENST00000566915 NEURL1O76050 574 aa3.78□□□□□ -1.81
LPCAT2-208ENST00000566915 KBTBD11O94819 623 aa3.78□□□□□ -1.81
LPCAT2-208ENST00000566915 TMIGD3P0DMS9 266 aaPredicted RBP3.78□□□□□ -1.81
LPCAT2-208ENST00000566915 EDN3P14138 238 aa3.78□□□□□ -1.81
LPCAT2-208ENST00000566915 COL8A1P27658 744 aa3.78□□□□□ -1.81
LPCAT2-208ENST00000566915 CA7P43166 264 aa3.78□□□□□ -1.81
LPCAT2-208ENST00000566915 AGFG1P52594 562 aaKnown RBP3.78□□□□□ -1.81
LPCAT2-208ENST00000566915 MS4A18Q3C1V0 323 aa3.78□□□□□ -1.81
LPCAT2-208ENST00000566915 C9orf152Q5JTZ5 239 aa3.78□□□□□ -1.81
LPCAT2-208ENST00000566915 FBXW9Q5XUX1 488 aa3.78□□□□□ -1.81
LPCAT2-208ENST00000566915 DHRS11Q6UWP2 260 aa3.78□□□□□ -1.81
LPCAT2-208ENST00000566915 UNQ6494/PRO21346Q6UXR6 183 aa3.78□□□□□ -1.81
LPCAT2-208ENST00000566915 ZAR1Q86SH2 424 aa3.78□□□□□ -1.81
LPCAT2-208ENST00000566915 C9orf40Q8IXQ3 194 aa3.78□□□□□ -1.81
LPCAT2-208ENST00000566915 APCDD1LQ8NCL9 501 aa3.78□□□□□ -1.81
LPCAT2-208ENST00000566915 OR4P4Q8NGL7 312 aa3.78□□□□□ -1.81
LPCAT2-208ENST00000566915 TBX15Q96SF7 602 aa3.78□□□□□ -1.81
LPCAT2-208ENST00000566915 TM2D1Q9BX74 207 aa3.78□□□□□ -1.81
LPCAT2-208ENST00000566915 MRPL32Q9BYC8 188 aaKnown RBP3.78□□□□□ -1.81
LPCAT2-208ENST00000566915 MS4A7Q9GZW8 240 aaPredicted RBP3.78□□□□□ -1.81
LPCAT2-208ENST00000566915 LHX9Q9NQ69 397 aa3.78□□□□□ -1.81
LPCAT2-208ENST00000566915 FAM206AQ9NX38 181 aa3.78□□□□□ -1.81
LPCAT2-208ENST00000566915 RNF7Q9UBF6 113 aa3.78□□□□□ -1.81
LPCAT2-208ENST00000566915 CLN8Q9UBY8 286 aa3.78□□□□□ -1.81
LPCAT2-208ENST00000566915 RALGAPA2Q2PPJ7 1873 aa3.78□□□□□ -1.81
LPCAT2-208ENST00000566915 TRPM6Q9BX84 2022 aa3.77□□□□□ -1.81
LPCAT2-208ENST00000566915 MYO9BQ13459 2157 aa3.77□□□□□ -1.81
LPCAT2-208ENST00000566915 CLDN14O95500 239 aa3.77□□□□□ -1.81
LPCAT2-208ENST00000566915 FAM157CP0CG43 387 aa3.77□□□□□ -1.81
LPCAT2-208ENST00000566915 HOXB3P14651 431 aaPredicted RBP3.77□□□□□ -1.81
LPCAT2-208ENST00000566915 FGF8P55075 233 aaPredicted RBP3.77□□□□□ -1.81
LPCAT2-208ENST00000566915 MLF1P58340 268 aa3.77□□□□□ -1.81
LPCAT2-208ENST00000566915 MOB3BQ86TA1 216 aa3.77□□□□□ -1.81
LPCAT2-208ENST00000566915 TMEM183AQ8IXX5 376 aa3.77□□□□□ -1.81
LPCAT2-208ENST00000566915 ZNF645Q8N7E2 425 aa3.77□□□□□ -1.81
LPCAT2-208ENST00000566915 DEFB108BQ8NET1 73 aa3.77□□□□□ -1.81
LPCAT2-208ENST00000566915 HIST1H2BAQ96A08 127 aa3.77□□□□□ -1.81
LPCAT2-208ENST00000566915 MRGPRFQ96AM1 343 aa3.77□□□□□ -1.81
LPCAT2-208ENST00000566915 Q96M66 194 aa3.77□□□□□ -1.81
LPCAT2-208ENST00000566915 MRPL22Q9NWU5 206 aaKnown RBP3.77□□□□□ -1.81
LPCAT2-208ENST00000566915 ZSWIM8A7E2V4 1837 aa3.77□□□□□ -1.81
LPCAT2-208ENST00000566915 K7ESF4 209 aa3.77□□□□□ -1.81
LPCAT2-208ENST00000566915 GREM1O60565 184 aa3.77□□□□□ -1.81
LPCAT2-208ENST00000566915 IGLV3-19P01714 112 aa3.77□□□□□ -1.81
LPCAT2-208ENST00000566915 SCGB1C2P0DMR2 95 aa3.77□□□□□ -1.81
LPCAT2-208ENST00000566915 LSM11P83369 360 aaKnown RBP eCLIP3.77□□□□□ -1.81
LPCAT2-208ENST00000566915 SRSF5Q13243 272 aaKnown RBP3.77□□□□□ -1.81
LPCAT2-208ENST00000566915 C1QL3Q5VWW1 255 aa3.77□□□□□ -1.81
LPCAT2-208ENST00000566915 CALHM1Q8IU99 346 aa3.77□□□□□ -1.81
LPCAT2-208ENST00000566915 MRGPRDQ8TDS7 321 aa3.77□□□□□ -1.81
LPCAT2-208ENST00000566915 Q8WTZ3 238 aa3.77□□□□□ -1.81
LPCAT2-208ENST00000566915 APOBEC4Q8WW27 367 aaKnown RBP3.77□□□□□ -1.81
LPCAT2-208ENST00000566915 DYRK2Q92630 601 aa3.77□□□□□ -1.81
LPCAT2-208ENST00000566915 RAB1CQ92928 201 aa3.77□□□□□ -1.81
LPCAT2-208ENST00000566915 FLYWCH2Q96CP2 140 aaKnown RBP3.77□□□□□ -1.81
LPCAT2-208ENST00000566915 KLHDC2Q9Y2U9 406 aa3.77□□□□□ -1.81
LPCAT2-208ENST00000566915 SOX21Q9Y651 276 aaPredicted RBP3.77□□□□□ -1.81
LPCAT2-208ENST00000566915 PCM1Q15154 2024 aa3.77□□□□□ -1.81
LPCAT2-208ENST00000566915 IGKV1-8A0A0C4DH67 115 aa3.77□□□□□ -1.81
LPCAT2-208ENST00000566915 ZNF729A6NN14 1252 aaPredicted RBP3.77□□□□□ -1.81
LPCAT2-208ENST00000566915 TMEM229AB2RXF0 380 aa3.77□□□□□ -1.81
LPCAT2-208ENST00000566915 HYAL3O43820 417 aaPredicted RBP3.77□□□□□ -1.81
LPCAT2-208ENST00000566915 RAB9AP51151 201 aa3.77□□□□□ -1.81
LPCAT2-208ENST00000566915 RPL30P62888 115 aaKnown RBP3.77□□□□□ -1.81
LPCAT2-208ENST00000566915 P2RY6Q15077 328 aa3.77□□□□□ -1.81
LPCAT2-208ENST00000566915 ZNF658BQ4V348 819 aaPredicted RBP3.77□□□□□ -1.81
LPCAT2-208ENST00000566915 CCDC144NLQ6NUI1 221 aa3.77□□□□□ -1.81
LPCAT2-208ENST00000566915 BATF2Q8N1L9 274 aa3.77□□□□□ -1.81
LPCAT2-208ENST00000566915 C5orf17Q8NAS9 161 aa3.77□□□□□ -1.81
LPCAT2-208ENST00000566915 TMEM116Q8NCL8 245 aa3.77□□□□□ -1.81
LPCAT2-208ENST00000566915 MS4A5Q9H3V2 200 aa3.77□□□□□ -1.81
LPCAT2-208ENST00000566915 C5orf66Q9H5L9 145 aa3.77□□□□□ -1.81
LPCAT2-208ENST00000566915 G6PC2Q9NQR9 355 aa3.77□□□□□ -1.81
LPCAT2-208ENST00000566915 DOK5Q9P104 306 aa3.77□□□□□ -1.81
LPCAT2-208ENST00000566915 WIPI2Q9Y4P8 454 aa3.77□□□□□ -1.81
LPCAT2-208ENST00000566915 TRIP12Q14669 1992 aaPredicted RBP3.77□□□□□ -1.81
LPCAT2-208ENST00000566915 A0A0G2JK05 382 aa3.77□□□□□ -1.81
LPCAT2-208ENST00000566915 RBP4P02753 201 aa3.77□□□□□ -1.81
LPCAT2-208ENST00000566915 DAOP14920 347 aa3.77□□□□□ -1.81
LPCAT2-208ENST00000566915 Q1RN00 199 aa3.77□□□□□ -1.81
LPCAT2-208ENST00000566915 FAM209BQ5JX69 171 aa3.77□□□□□ -1.81
LPCAT2-208ENST00000566915 VWA1Q6PCB0 445 aa3.77□□□□□ -1.81
LPCAT2-208ENST00000566915 GTF3AQ92664 365 aaKnown RBP3.77□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 65.5 ms