RNA–Protein interactions for RNA: ENST00000565452.1

VPS9D1-205, Transcript of VPS9 domain containing 1, humanhuman

TSL 3

Gene VPS9D1, Length 178 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS9D1-205ENST00000565452 FAM90A10PA6NDY2 464 aa6.97□□□□□ -1.29
VPS9D1-205ENST00000565452 NUPR2A6NF83 97 aa6.97□□□□□ -1.29
VPS9D1-205ENST00000565452 FAM90A7PA6NKC0 464 aa6.97□□□□□ -1.29
VPS9D1-205ENST00000565452 FAM90A23PA8MXZ1 464 aa6.97□□□□□ -1.29
VPS9D1-205ENST00000565452 SLC17A2O00624 439 aa6.97□□□□□ -1.29
VPS9D1-205ENST00000565452 SLC22A1O15245 554 aa6.97□□□□□ -1.29
VPS9D1-205ENST00000565452 GLAP06280 429 aa6.97□□□□□ -1.29
VPS9D1-205ENST00000565452 GTF2F2P13984 249 aa6.97□□□□□ -1.29
VPS9D1-205ENST00000565452 BCL3P20749 454 aa6.97□□□□□ -1.29
VPS9D1-205ENST00000565452 GADD45AP24522 165 aa6.97□□□□□ -1.29
VPS9D1-205ENST00000565452 NPBWR2P48146 333 aa6.97□□□□□ -1.29
VPS9D1-205ENST00000565452 KCNJ3P48549 501 aa6.97□□□□□ -1.29
VPS9D1-205ENST00000565452 SCAND1P57086 179 aa6.97□□□□□ -1.29
VPS9D1-205ENST00000565452 IL13RA2Q14627 380 aa6.97□□□□□ -1.29
VPS9D1-205ENST00000565452 GRK1Q15835 563 aa6.97□□□□□ -1.29
VPS9D1-205ENST00000565452 PRAMEF5Q5TYX0 476 aa6.97□□□□□ -1.29
VPS9D1-205ENST00000565452 AWAT2Q6E213 333 aa6.97□□□□□ -1.29
VPS9D1-205ENST00000565452 C22orf42Q6IC83 251 aa6.97□□□□□ -1.29
VPS9D1-205ENST00000565452 TPRX1Q8N7U7 411 aa6.97□□□□□ -1.29
VPS9D1-205ENST00000565452 OR4D6Q8NGJ1 314 aa6.97□□□□□ -1.29
VPS9D1-205ENST00000565452 KCNG3Q8TAE7 436 aa6.97□□□□□ -1.29
VPS9D1-205ENST00000565452 EMG1Q92979 244 aaKnown RBP6.97□□□□□ -1.29
VPS9D1-205ENST00000565452 TOMM40LQ969M1 308 aa6.97□□□□□ -1.29
VPS9D1-205ENST00000565452 RFT1Q96AA3 541 aa6.97□□□□□ -1.29
VPS9D1-205ENST00000565452 OR5B12Q96R08 314 aa6.97□□□□□ -1.29
VPS9D1-205ENST00000565452 FUNDC2Q9BWH2 189 aa6.97□□□□□ -1.29
VPS9D1-205ENST00000565452 CST11Q9H112 138 aa6.97□□□□□ -1.29
VPS9D1-205ENST00000565452 IFT22Q9H7X7 185 aa6.97□□□□□ -1.29
VPS9D1-205ENST00000565452 PLGRKTQ9HBL7 147 aa6.97□□□□□ -1.29
VPS9D1-205ENST00000565452 LIN7CQ9NUP9 197 aaKnown RBP6.97□□□□□ -1.29
VPS9D1-205ENST00000565452 KLK5Q9Y337 293 aaPredicted RBP6.97□□□□□ -1.29
VPS9D1-205ENST00000565452 AK6Q9Y3D8 172 aaKnown RBP6.97□□□□□ -1.29
VPS9D1-205ENST00000565452 AMMECR1Q9Y4X0 333 aaPredicted RBP6.97□□□□□ -1.29
VPS9D1-205ENST00000565452 IGKV1-12A0A0C4DH73 117 aa6.96□□□□□ -1.3
VPS9D1-205ENST00000565452 LOC100506127A0A0U1RQW1 187 aa6.96□□□□□ -1.3
VPS9D1-205ENST00000565452 TMEM82A0PJX8 343 aa6.96□□□□□ -1.3
VPS9D1-205ENST00000565452 NOTOA8MTQ0 251 aa6.96□□□□□ -1.3
VPS9D1-205ENST00000565452 LINC01619G3V211 115 aa6.96□□□□□ -1.3
VPS9D1-205ENST00000565452 MGST3O14880 152 aa6.96□□□□□ -1.3
VPS9D1-205ENST00000565452 DEDDO75618 318 aa6.96□□□□□ -1.3
VPS9D1-205ENST00000565452 HTR3BO95264 441 aa6.96□□□□□ -1.3
VPS9D1-205ENST00000565452 IL1AP01583 271 aa6.96□□□□□ -1.3
VPS9D1-205ENST00000565452 IGKV1D-12P01611 117 aa6.96□□□□□ -1.3
VPS9D1-205ENST00000565452 PRKACAP17612 351 aa6.96□□□□□ -1.3
VPS9D1-205ENST00000565452 GABRR1P24046 479 aa6.96□□□□□ -1.3
VPS9D1-205ENST00000565452 ERP29P30040 261 aaKnown RBP6.96□□□□□ -1.3
VPS9D1-205ENST00000565452 RAB7AP51149 207 aa6.96□□□□□ -1.3
VPS9D1-205ENST00000565452 TMBIM6P55061 237 aa6.96□□□□□ -1.3
VPS9D1-205ENST00000565452 GNB1P62873 340 aa6.96□□□□□ -1.3
VPS9D1-205ENST00000565452 PITPNAQ00169 270 aa6.96□□□□□ -1.3
VPS9D1-205ENST00000565452 CFHR3Q02985 330 aa6.96□□□□□ -1.3
VPS9D1-205ENST00000565452 MPV17LQ2QL34 196 aa6.96□□□□□ -1.3
VPS9D1-205ENST00000565452 GLIPR1L1Q6UWM5 242 aa6.96□□□□□ -1.3
VPS9D1-205ENST00000565452 BAIAP2L2Q6UXY1 529 aa6.96□□□□□ -1.3
VPS9D1-205ENST00000565452 OR8H3Q8N146 312 aa6.96□□□□□ -1.3
VPS9D1-205ENST00000565452 BATF2Q8N1L9 274 aa6.96□□□□□ -1.3
VPS9D1-205ENST00000565452 OR5D18Q8NGL1 313 aa6.96□□□□□ -1.3
VPS9D1-205ENST00000565452 OR9G1Q8NH87 305 aa6.96□□□□□ -1.3
VPS9D1-205ENST00000565452 ARPC1AQ92747 370 aa6.96□□□□□ -1.3
VPS9D1-205ENST00000565452 CORO2AQ92828 525 aa6.96□□□□□ -1.3
VPS9D1-205ENST00000565452 PTX4Q96A99 478 aa6.96□□□□□ -1.3
VPS9D1-205ENST00000565452 RASL11BQ9BPW5 248 aa6.96□□□□□ -1.3
VPS9D1-205ENST00000565452 NABP2Q9BQ15 211 aa6.96□□□□□ -1.3
VPS9D1-205ENST00000565452 FAM110AQ9BQ89 295 aa6.96□□□□□ -1.3
VPS9D1-205ENST00000565452 NCOR1P1Q9H4R4 102 aa6.96□□□□□ -1.3
VPS9D1-205ENST00000565452 GNB4Q9HAV0 340 aa6.96□□□□□ -1.3
VPS9D1-205ENST00000565452 ZNF286AQ9HBT8 521 aa6.96□□□□□ -1.3
VPS9D1-205ENST00000565452 SPACA1Q9HBV2 294 aa6.96□□□□□ -1.3
VPS9D1-205ENST00000565452 RETNQ9HD89 108 aa6.96□□□□□ -1.3
VPS9D1-205ENST00000565452 TAS2R3Q9NYW6 316 aa6.96□□□□□ -1.3
VPS9D1-205ENST00000565452 KIAA1456Q9P272 454 aa6.96□□□□□ -1.3
VPS9D1-205ENST00000565452 STEAP1Q9UHE8 339 aa6.96□□□□□ -1.3
VPS9D1-205ENST00000565452 ST3GAL6Q9Y274 331 aa6.96□□□□□ -1.3
VPS9D1-205ENST00000565452 FAM172BPA6NC97 362 aa6.95□□□□□ -1.3
VPS9D1-205ENST00000565452 IFITM5A6NNB3 132 aa6.95□□□□□ -1.3
VPS9D1-205ENST00000565452 F8VVB4 439 aa6.95□□□□□ -1.3
VPS9D1-205ENST00000565452 F8VWA3 439 aa6.95□□□□□ -1.3
VPS9D1-205ENST00000565452 H0Y980 276 aa6.95□□□□□ -1.3
VPS9D1-205ENST00000565452 AIPO00170 330 aa6.95□□□□□ -1.3
VPS9D1-205ENST00000565452 DEGS1O15121 323 aa6.95□□□□□ -1.3
VPS9D1-205ENST00000565452 CDRT1O95170 752 aa6.95□□□□□ -1.3
VPS9D1-205ENST00000565452 CNIH1O95406 144 aa6.95□□□□□ -1.3
VPS9D1-205ENST00000565452 BRI3O95415 125 aa6.95□□□□□ -1.3
VPS9D1-205ENST00000565452 HAND1O96004 215 aa6.95□□□□□ -1.3
VPS9D1-205ENST00000565452 IGKV1D-33P01593 117 aa6.95□□□□□ -1.3
VPS9D1-205ENST00000565452 IGKV1-33P01594 117 aa6.95□□□□□ -1.3
VPS9D1-205ENST00000565452 CALCBP10092 127 aa6.95□□□□□ -1.3
VPS9D1-205ENST00000565452 SDC2P34741 201 aa6.95□□□□□ -1.3
VPS9D1-205ENST00000565452 PAX5Q02548 391 aa6.95□□□□□ -1.3
VPS9D1-205ENST00000565452 KIAA0141Q14154 515 aaPredicted RBP6.95□□□□□ -1.3
VPS9D1-205ENST00000565452 RAB11BQ15907 218 aa6.95□□□□□ -1.3
VPS9D1-205ENST00000565452 C2orf76Q3KRA6 126 aa6.95□□□□□ -1.3
VPS9D1-205ENST00000565452 SLC22A6Q4U2R8 563 aa6.95□□□□□ -1.3
VPS9D1-205ENST00000565452 LGALS9CQ6DKI2 356 aa6.95□□□□□ -1.3
VPS9D1-205ENST00000565452 CEMP1Q6PRD7 247 aaPredicted RBP6.95□□□□□ -1.3
VPS9D1-205ENST00000565452 GTSCR1Q86UQ5 136 aa6.95□□□□□ -1.3
VPS9D1-205ENST00000565452 MYOZ3Q8TDC0 251 aa6.95□□□□□ -1.3
VPS9D1-205ENST00000565452 FAM3DQ96BQ1 224 aa6.95□□□□□ -1.3
VPS9D1-205ENST00000565452 URM1Q9BTM9 101 aaKnown RBP6.95□□□□□ -1.3
VPS9D1-205ENST00000565452 CENPOQ9BU64 300 aa6.95□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms