RNA–Protein interactions for RNA: ENST00000564970.1

PTPN9-204, Transcript of protein tyrosine phosphatase, non-receptor type 9, humanhuman

TSL 5

Gene PTPN9, Length 726 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN9-204ENST00000564970 ZXDAP98168 799 aa5.4□□□□□ -1.54
PTPN9-204ENST00000564970 SP4Q02446 784 aa5.4□□□□□ -1.54
PTPN9-204ENST00000564970 FUT7Q11130 342 aa5.4□□□□□ -1.54
PTPN9-204ENST00000564970 PSG5Q15238 335 aa5.4□□□□□ -1.54
PTPN9-204ENST00000564970 FAM110CQ1W6H9 321 aa5.4□□□□□ -1.54
PTPN9-204ENST00000564970 NRN1LQ496H8 165 aa5.4□□□□□ -1.54
PTPN9-204ENST00000564970 PRR30Q53SZ7 412 aaPredicted RBP5.4□□□□□ -1.54
PTPN9-204ENST00000564970 MUC21Q5SSG8 566 aa5.4□□□□□ -1.54
PTPN9-204ENST00000564970 ABHD17CQ6PCB6 329 aa5.4□□□□□ -1.54
PTPN9-204ENST00000564970 SLC25A47Q6Q0C1 308 aa5.4□□□□□ -1.54
PTPN9-204ENST00000564970 CPEB2Q7Z5Q1 589 aaKnown RBP5.4□□□□□ -1.54
PTPN9-204ENST00000564970 DTX1Q86Y01 620 aa5.4□□□□□ -1.54
PTPN9-204ENST00000564970 PIANPQ8IYJ0 282 aa5.4□□□□□ -1.54
PTPN9-204ENST00000564970 LRRC75A-AS1Q8N1F1 130 aa5.4□□□□□ -1.54
PTPN9-204ENST00000564970 TMEM86AQ8N2M4 240 aa5.4□□□□□ -1.54
PTPN9-204ENST00000564970 GCSAMQ8N6F7 178 aa5.4□□□□□ -1.54
PTPN9-204ENST00000564970 ZFP62Q8NB50 900 aaPredicted RBP5.4□□□□□ -1.54
PTPN9-204ENST00000564970 ZNF436-AS1Q8NC38 126 aaPredicted RBP5.4□□□□□ -1.54
PTPN9-204ENST00000564970 OR8B3Q8NGG8 313 aa5.4□□□□□ -1.54
PTPN9-204ENST00000564970 OR10D3Q8NH80 312 aa5.4□□□□□ -1.54
PTPN9-204ENST00000564970 OR1L1Q8NH94 360 aa5.4□□□□□ -1.54
PTPN9-204ENST00000564970 SCGB1C1Q8TD33 95 aa5.4□□□□□ -1.54
PTPN9-204ENST00000564970 OR8B2Q96RD0 313 aa5.4□□□□□ -1.54
PTPN9-204ENST00000564970 MCHR1Q99705 422 aa5.4□□□□□ -1.54
PTPN9-204ENST00000564970 TM2D1Q9BX74 207 aa5.4□□□□□ -1.54
PTPN9-204ENST00000564970 VN1R1Q9GZP7 353 aa5.4□□□□□ -1.54
PTPN9-204ENST00000564970 PARP12Q9H0J9 701 aaKnown RBP5.4□□□□□ -1.54
PTPN9-204ENST00000564970 MRPL18Q9H0U6 180 aaKnown RBP5.4□□□□□ -1.54
PTPN9-204ENST00000564970 SH3BGRL3Q9H299 93 aa5.4□□□□□ -1.54
PTPN9-204ENST00000564970 CXCL16Q9H2A7 254 aa5.4□□□□□ -1.54
PTPN9-204ENST00000564970 IFI27L2Q9H2X8 130 aa5.4□□□□□ -1.54
PTPN9-204ENST00000564970 CRLS1Q9UJA2 301 aa5.4□□□□□ -1.54
PTPN9-204ENST00000564970 KCNS2Q9ULS6 477 aa5.4□□□□□ -1.54
PTPN9-204ENST00000564970 ABT1Q9ULW3 272 aaKnown RBP5.4□□□□□ -1.54
PTPN9-204ENST00000564970 MSRB2Q9Y3D2 182 aa5.4□□□□□ -1.54
PTPN9-204ENST00000564970 UBR3Q6ZT12 1888 aa5.4□□□□□ -1.55
PTPN9-204ENST00000564970 CCDC88CQ9P219 2028 aa5.4□□□□□ -1.55
PTPN9-204ENST00000564970 LAMA2P24043 3122 aaKnown RBP5.39□□□□□ -1.55
PTPN9-204ENST00000564970 TEX48A0A1B0GUV7 120 aa5.39□□□□□ -1.55
PTPN9-204ENST00000564970 A0A1B0GX51 115 aa5.39□□□□□ -1.55
PTPN9-204ENST00000564970 C2orf72A6NCS6 295 aa5.39□□□□□ -1.55
PTPN9-204ENST00000564970 LRRC3CA6NJW4 275 aa5.39□□□□□ -1.55
PTPN9-204ENST00000564970 LRRC30A6NM36 301 aa5.39□□□□□ -1.55
PTPN9-204ENST00000564970 FABP5P3A8MUU1 101 aa5.39□□□□□ -1.55
PTPN9-204ENST00000564970 GRXCR1A8MXD5 290 aa5.39□□□□□ -1.55
PTPN9-204ENST00000564970 CCL22O00626 93 aa5.39□□□□□ -1.55
PTPN9-204ENST00000564970 ISLRO14498 428 aa5.39□□□□□ -1.55
PTPN9-204ENST00000564970 DUX1O43812 170 aa5.39□□□□□ -1.55
PTPN9-204ENST00000564970 ZNF737O75373 536 aa5.39□□□□□ -1.55
PTPN9-204ENST00000564970 UPK3AO75631 287 aa5.39□□□□□ -1.55
PTPN9-204ENST00000564970 GJB3O75712 270 aa5.39□□□□□ -1.55
PTPN9-204ENST00000564970 DXOO77932 396 aaKnown RBP5.39□□□□□ -1.55
PTPN9-204ENST00000564970 NDUFB2O95178 105 aa5.39□□□□□ -1.55
PTPN9-204ENST00000564970 APOA2P02652 100 aa5.39□□□□□ -1.55
PTPN9-204ENST00000564970 TTRP02766 147 aa5.39□□□□□ -1.55
PTPN9-204ENST00000564970 CELA2AP08217 269 aa5.39□□□□□ -1.55
PTPN9-204ENST00000564970 MRPL3P09001 348 aaKnown RBP5.39□□□□□ -1.55
PTPN9-204ENST00000564970 SPINK8P0C7L1 97 aa5.39□□□□□ -1.55
PTPN9-204ENST00000564970 HIST1H1EP10412 219 aaKnown RBP5.39□□□□□ -1.55
PTPN9-204ENST00000564970 AREGP15514 252 aa5.39□□□□□ -1.55
PTPN9-204ENST00000564970 IGLL1P15814 213 aa5.39□□□□□ -1.55
PTPN9-204ENST00000564970 IGFBP3P17936 291 aaPredicted RBP5.39□□□□□ -1.55
PTPN9-204ENST00000564970 ACRV1P26436 265 aa5.39□□□□□ -1.55
PTPN9-204ENST00000564970 ID1P41134 155 aa5.39□□□□□ -1.55
PTPN9-204ENST00000564970 MFAP4P55083 255 aa5.39□□□□□ -1.55
PTPN9-204ENST00000564970 SNU13P55769 128 aaKnown RBP5.39□□□□□ -1.55
PTPN9-204ENST00000564970 GFRA1P56159 465 aa5.39□□□□□ -1.55
PTPN9-204ENST00000564970 LINC00310P59036 64 aa5.39□□□□□ -1.55
PTPN9-204ENST00000564970 RPS4XP62701 263 aaKnown RBP5.39□□□□□ -1.55
PTPN9-204ENST00000564970 RPS28P62857 69 aaKnown RBP5.39□□□□□ -1.55
PTPN9-204ENST00000564970 PITX1P78337 314 aaPredicted RBP5.39□□□□□ -1.55
PTPN9-204ENST00000564970 MGAT2Q10469 447 aa5.39□□□□□ -1.55
PTPN9-204ENST00000564970 PSG7Q13046 419 aa5.39□□□□□ -1.55
PTPN9-204ENST00000564970 NFATC4Q14934 902 aa5.39□□□□□ -1.55
PTPN9-204ENST00000564970 IGFBP7Q16270 282 aa5.39□□□□□ -1.55
PTPN9-204ENST00000564970 EMC4Q5J8M3 183 aa5.39□□□□□ -1.55
PTPN9-204ENST00000564970 DCAF12Q5T6F0 453 aa5.39□□□□□ -1.55
PTPN9-204ENST00000564970 ACSM6Q6P461 480 aa5.39□□□□□ -1.55
PTPN9-204ENST00000564970 BPIFA4PQ86YQ2 179 aa5.39□□□□□ -1.55
PTPN9-204ENST00000564970 METTL27Q8N6F8 245 aaPredicted RBP5.39□□□□□ -1.55
PTPN9-204ENST00000564970 TEX29Q8N6K0 151 aa5.39□□□□□ -1.55
PTPN9-204ENST00000564970 OR5AN1Q8NGI8 311 aa5.39□□□□□ -1.55
PTPN9-204ENST00000564970 TMEM54Q969K7 222 aa5.39□□□□□ -1.55
PTPN9-204ENST00000564970 RNF183Q96D59 192 aa5.39□□□□□ -1.55
PTPN9-204ENST00000564970 KLHDC7BQ96G42 594 aa5.39□□□□□ -1.55
PTPN9-204ENST00000564970 C4orf45Q96LM5 186 aa5.39□□□□□ -1.55
PTPN9-204ENST00000564970 RCHY1Q96PM5 261 aa5.39□□□□□ -1.55
PTPN9-204ENST00000564970 DUX5Q96PT3 197 aa5.39□□□□□ -1.55
PTPN9-204ENST00000564970 OR2A5Q96R48 311 aa5.39□□□□□ -1.55
PTPN9-204ENST00000564970 GPX7Q96SL4 187 aaPredicted RBP5.39□□□□□ -1.55
PTPN9-204ENST00000564970 SDF2Q99470 211 aa5.39□□□□□ -1.55
PTPN9-204ENST00000564970 VGLL1Q99990 258 aa5.39□□□□□ -1.55
PTPN9-204ENST00000564970 TMEM70Q9BUB7 260 aa5.39□□□□□ -1.55
PTPN9-204ENST00000564970 SFXN3Q9BWM7 321 aa5.39□□□□□ -1.55
PTPN9-204ENST00000564970 MAP1LC3AQ9H492 121 aa5.39□□□□□ -1.55
PTPN9-204ENST00000564970 C11orf1Q9H5F2 150 aa5.39□□□□□ -1.55
PTPN9-204ENST00000564970 PNRC2Q9NPJ4 139 aaKnown RBP5.39□□□□□ -1.55
PTPN9-204ENST00000564970 SPANXB1Q9NS25 103 aaPredicted RBP5.39□□□□□ -1.55
PTPN9-204ENST00000564970 IL36BQ9NZH7 164 aa5.39□□□□□ -1.55
PTPN9-204ENST00000564970 TAAR3PQ9P1P4 343 aa5.39□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms