RNA–Protein interactions for RNA: ENST00000563952.1

CMTM4-204, Transcript of CKLF like MARVEL transmembrane domain containing 4, humanhuman

TSL 1 (best) BASIC

Gene CMTM4, Length 1,023 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM4-204ENST00000563952 ZNF880Q6PDB4 577 aa24.42■■□□□ 1.5
CMTM4-204ENST00000563952 NDUFA11Q86Y39 141 aa24.42■■□□□ 1.5
CMTM4-204ENST00000563952 YPEL2Q96QA6 119 aa24.42■■□□□ 1.5
CMTM4-204ENST00000563952 RAB22AQ9UL26 194 aa24.42■■□□□ 1.5
CMTM4-204ENST00000563952 SMIM30A4D0T7 59 aa24.41■■□□□ 1.5
CMTM4-204ENST00000563952 NCBP2LA6PVI3 153 aaKnown RBP24.41■■□□□ 1.5
CMTM4-204ENST00000563952 ZNF736B4DX44 427 aaPredicted RBP24.41■■□□□ 1.5
CMTM4-204ENST00000563952 FGF16O43320 207 aa24.41■■□□□ 1.5
CMTM4-204ENST00000563952 CD1BP29016 333 aa24.41■■□□□ 1.5
CMTM4-204ENST00000563952 RBMXL1Q96E39 390 aaKnown RBP24.4■■□□□ 1.5
CMTM4-204ENST00000563952 C12orf4Q9NQ89 552 aa24.4■■□□□ 1.5
CMTM4-204ENST00000563952 TXNL4BQ9NX01 149 aaKnown RBP24.4■■□□□ 1.5
CMTM4-204ENST00000563952 STUB1Q9UNE7 303 aa24.4■■□□□ 1.5
CMTM4-204ENST00000563952 CMYA5Q8N3K9 4069 aa24.4■■□□□ 1.5
CMTM4-204ENST00000563952 TRBV6-6A0A0A6YYG2 114 aa24.39■■□□□ 1.49
CMTM4-204ENST00000563952 A0A0B4J203 849 aa24.39■■□□□ 1.49
CMTM4-204ENST00000563952 LANCL1O43813 399 aa24.39■■□□□ 1.49
CMTM4-204ENST00000563952 MOSP00540 346 aa24.39■■□□□ 1.49
CMTM4-204ENST00000563952 PLAC9Q5JTB6 97 aa24.39■■□□□ 1.49
CMTM4-204ENST00000563952 OR2AK2Q8NG84 335 aa24.39■■□□□ 1.49
CMTM4-204ENST00000563952 CMSS1Q9BQ75 279 aaKnown RBP24.39■■□□□ 1.49
CMTM4-204ENST00000563952 MEGF8Q7Z7M0 2845 aa24.38■■□□□ 1.49
CMTM4-204ENST00000563952 A0A1W2PRX2 142 aa24.38■■□□□ 1.49
CMTM4-204ENST00000563952 C10orf99Q6UWK7 81 aa24.38■■□□□ 1.49
CMTM4-204ENST00000563952 Q8N6K4 173 aa24.38■■□□□ 1.49
CMTM4-204ENST00000563952 ADARB2-AS1A8MUL3 147 aa24.37■■□□□ 1.49
CMTM4-204ENST00000563952 FGF9P31371 208 aaPredicted RBP24.37■■□□□ 1.49
CMTM4-204ENST00000563952 HLA-DRB3P79483 266 aa24.37■■□□□ 1.49
CMTM4-204ENST00000563952 LY6G6FQ5SQ64 297 aa24.37■■□□□ 1.49
CMTM4-204ENST00000563952 NR2C2APQ86WQ0 139 aa24.37■■□□□ 1.49
CMTM4-204ENST00000563952 ODF3L1Q8IXM7 274 aa24.37■■□□□ 1.49
CMTM4-204ENST00000563952 Q9N2K0 584 aa24.37■■□□□ 1.49
CMTM4-204ENST00000563952 SSR3Q9UNL2 185 aa24.37■■□□□ 1.49
CMTM4-204ENST00000563952 OR3A3P47888 321 aa24.36■■□□□ 1.49
CMTM4-204ENST00000563952 CD83Q01151 205 aa24.36■■□□□ 1.49
CMTM4-204ENST00000563952 DEFA6Q01524 100 aa24.36■■□□□ 1.49
CMTM4-204ENST00000563952 LSAMPQ13449 338 aa24.36■■□□□ 1.49
CMTM4-204ENST00000563952 NEDD8Q15843 81 aa24.36■■□□□ 1.49
CMTM4-204ENST00000563952 MOGAT2Q3SYC2 334 aa24.36■■□□□ 1.49
CMTM4-204ENST00000563952 OR4X2Q8NGF9 303 aa24.36■■□□□ 1.49
CMTM4-204ENST00000563952 R3HDM4Q96D70 268 aa24.36■■□□□ 1.49
CMTM4-204ENST00000563952 RAB3CQ96E17 227 aa24.36■■□□□ 1.49
CMTM4-204ENST00000563952 MGAT4AQ9UM21 535 aa24.36■■□□□ 1.49
CMTM4-204ENST00000563952 TCRBV4S1A1TA0A5B7 111 aa24.35■■□□□ 1.49
CMTM4-204ENST00000563952 ST8SIA5O15466 376 aa24.35■■□□□ 1.49
CMTM4-204ENST00000563952 OPN1MWP04001 364 aa24.35■■□□□ 1.49
CMTM4-204ENST00000563952 OPN1MW2P0DN77 364 aa24.35■■□□□ 1.49
CMTM4-204ENST00000563952 OPN1MW3P0DN78 364 aa24.35■■□□□ 1.49
CMTM4-204ENST00000563952 SLC2A2P11168 524 aaPredicted RBP24.35■■□□□ 1.49
CMTM4-204ENST00000563952 KCTD21Q4G0X4 260 aa24.35■■□□□ 1.49
CMTM4-204ENST00000563952 TCTEX1D4Q5JR98 221 aa24.35■■□□□ 1.49
CMTM4-204ENST00000563952 SLC35E3Q7Z769 313 aa24.35■■□□□ 1.49
CMTM4-204ENST00000563952 NOL4LQ96MY1 436 aaPredicted RBP24.35■■□□□ 1.49
CMTM4-204ENST00000563952 MRPL20Q9BYC9 149 aaKnown RBP24.35■■□□□ 1.49
CMTM4-204ENST00000563952 OR51E2Q9H255 320 aa24.35■■□□□ 1.49
CMTM4-204ENST00000563952 SLC23A1Q9UHI7 598 aa24.35■■□□□ 1.49
CMTM4-204ENST00000563952 SAA2-SAA4A0A096LPE2 208 aa24.34■■□□□ 1.49
CMTM4-204ENST00000563952 SERPINE3A8MV23 424 aa24.34■■□□□ 1.49
CMTM4-204ENST00000563952 SAA2P0DJI9 122 aaPredicted RBP24.34■■□□□ 1.49
CMTM4-204ENST00000563952 MRPS15P82914 257 aaKnown RBP24.34■■□□□ 1.49
CMTM4-204ENST00000563952 Q8N9W7 124 aa24.34■■□□□ 1.49
CMTM4-204ENST00000563952 OR4F17Q8NGA8 305 aa24.34■■□□□ 1.49
CMTM4-204ENST00000563952 OR10R2Q8NGX6 335 aa24.34■■□□□ 1.49
CMTM4-204ENST00000563952 OR4F4Q96R69 305 aa24.34■■□□□ 1.49
CMTM4-204ENST00000563952 PARP12Q9H0J9 701 aaKnown RBP24.34■■□□□ 1.49
CMTM4-204ENST00000563952 IFI27L2Q9H2X8 130 aa24.34■■□□□ 1.49
CMTM4-204ENST00000563952 OR1A1Q9P1Q5 309 aa24.34■■□□□ 1.49
CMTM4-204ENST00000563952 A0A075B6Q4 140 aa24.33■■□□□ 1.49
CMTM4-204ENST00000563952 PSMB11A5LHX3 300 aa24.33■■□□□ 1.49
CMTM4-204ENST00000563952 HSPA12AO43301 675 aa24.33■■□□□ 1.49
CMTM4-204ENST00000563952 SCTP09683 121 aa24.33■■□□□ 1.49
CMTM4-204ENST00000563952 CD3GP09693 182 aa24.33■■□□□ 1.49
CMTM4-204ENST00000563952 RAB6AP20340 208 aa24.33■■□□□ 1.49
CMTM4-204ENST00000563952 GADD45AP24522 165 aa24.33■■□□□ 1.49
CMTM4-204ENST00000563952 KHDC1LQ5JSQ8 128 aa24.33■■□□□ 1.49
CMTM4-204ENST00000563952 ZNF833PQ6ZTB9 187 aa24.33■■□□□ 1.49
CMTM4-204ENST00000563952 C1QL4Q86Z23 238 aa24.33■■□□□ 1.49
CMTM4-204ENST00000563952 S1PR3Q99500 378 aa24.33■■□□□ 1.49
CMTM4-204ENST00000563952 PLSCR3Q9NRY6 295 aa24.33■■□□□ 1.49
CMTM4-204ENST00000563952 LINC00527Q9UJ94 153 aa24.33■■□□□ 1.49
CMTM4-204ENST00000563952 KCNK7Q9Y2U2 307 aa24.33■■□□□ 1.49
CMTM4-204ENST00000563952 KCNAB3O43448 404 aa24.32■■□□□ 1.48
CMTM4-204ENST00000563952 IGHG2P01859 326 aa24.32■■□□□ 1.48
CMTM4-204ENST00000563952 CEACAM6P40199 344 aa24.32■■□□□ 1.48
CMTM4-204ENST00000563952 ZNF329Q86UD4 541 aa24.32■■□□□ 1.48
CMTM4-204ENST00000563952 RASL11BQ9BPW5 248 aa24.32■■□□□ 1.48
CMTM4-204ENST00000563952 NABP2Q9BQ15 211 aa24.32■■□□□ 1.48
CMTM4-204ENST00000563952 CHCHD6Q9BRQ6 235 aa24.32■■□□□ 1.48
CMTM4-204ENST00000563952 LIN7CQ9NUP9 197 aaKnown RBP24.32■■□□□ 1.48
CMTM4-204ENST00000563952 METTL21EPA6NDL7 271 aa24.31■■□□□ 1.48
CMTM4-204ENST00000563952 NOTOA8MTQ0 251 aa24.31■■□□□ 1.48
CMTM4-204ENST00000563952 WIPF1O43516 503 aa24.31■■□□□ 1.48
CMTM4-204ENST00000563952 GNB3P16520 340 aa24.31■■□□□ 1.48
CMTM4-204ENST00000563952 ZBTB25P24278 435 aa24.31■■□□□ 1.48
CMTM4-204ENST00000563952 F2RL1P55085 397 aa24.31■■□□□ 1.48
CMTM4-204ENST00000563952 TPRA1Q86W33 373 aa24.31■■□□□ 1.48
CMTM4-204ENST00000563952 FOXRED2Q8IWF2 684 aa24.31■■□□□ 1.48
CMTM4-204ENST00000563952 OR8H1Q8NGG4 311 aa24.31■■□□□ 1.48
CMTM4-204ENST00000563952 CHPT1Q8WUD6 406 aa24.31■■□□□ 1.48
CMTM4-204ENST00000563952 TSSC4Q9Y5U2 329 aaPredicted RBP24.31■■□□□ 1.48
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms