RNA–Protein interactions for RNA: ENST00000563683.5

RNF40-204, Transcript of ring finger protein 40, humanhuman

TSL 5 BASIC

Gene RNF40, Length 4,063 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40-204ENST00000563683 OR2Z1Q8NG97 314 aa8.98□□□□□ -0.97
RNF40-204ENST00000563683 OR10P1Q8NGE3 313 aa8.98□□□□□ -0.97
RNF40-204ENST00000563683 HPSE2Q8WWQ2 592 aa8.98□□□□□ -0.97
RNF40-204ENST00000563683 HIST1H2BLQ99880 126 aa8.98□□□□□ -0.97
RNF40-204ENST00000563683 PLEKHA3Q9HB20 300 aa8.98□□□□□ -0.97
RNF40-204ENST00000563683 TMEM242Q9NWH2 141 aa8.98□□□□□ -0.97
RNF40-204ENST00000563683 A8MWP6 167 aa8.97□□□□□ -0.97
RNF40-204ENST00000563683 M0R1B8 84 aa8.97□□□□□ -0.97
RNF40-204ENST00000563683 FGF8P55075 233 aaPredicted RBP8.97□□□□□ -0.97
RNF40-204ENST00000563683 CASP6P55212 293 aa8.97□□□□□ -0.97
RNF40-204ENST00000563683 KCNMB1Q16558 191 aa8.97□□□□□ -0.97
RNF40-204ENST00000563683 TIPARPQ7Z3E1 657 aaKnown RBP8.97□□□□□ -0.97
RNF40-204ENST00000563683 WDFY1Q8IWB7 410 aa8.97□□□□□ -0.97
RNF40-204ENST00000563683 CYB561D1Q8N8Q1 229 aa8.97□□□□□ -0.97
RNF40-204ENST00000563683 PROCRQ9UNN8 238 aa8.97□□□□□ -0.97
RNF40-204ENST00000563683 DOCK10Q96BY6 2186 aa8.97□□□□□ -0.97
RNF40-204ENST00000563683 SYNGR3O43761 229 aa8.97□□□□□ -0.97
RNF40-204ENST00000563683 CYTIPO60759 359 aa8.97□□□□□ -0.97
RNF40-204ENST00000563683 ACTL6BO94805 426 aa8.97□□□□□ -0.97
RNF40-204ENST00000563683 TNFSF4P23510 183 aa8.97□□□□□ -0.97
RNF40-204ENST00000563683 GPR12P47775 334 aa8.97□□□□□ -0.97
RNF40-204ENST00000563683 TMEM187Q14656 261 aa8.97□□□□□ -0.97
RNF40-204ENST00000563683 LRTM2Q8N967 370 aa8.97□□□□□ -0.97
RNF40-204ENST00000563683 RNASEH2CQ8TDP1 164 aaKnown RBP8.97□□□□□ -0.97
RNF40-204ENST00000563683 MRPL37Q9BZE1 423 aaKnown RBP8.97□□□□□ -0.97
RNF40-204ENST00000563683 MSL2Q9HCI7 577 aa8.97□□□□□ -0.97
RNF40-204ENST00000563683 LTBP2Q14767 1821 aa8.97□□□□□ -0.97
RNF40-204ENST00000563683 ATP6V0CP27449 155 aa8.97□□□□□ -0.97
RNF40-204ENST00000563683 PSMB3P49720 205 aa8.97□□□□□ -0.97
RNF40-204ENST00000563683 TAS2R30P59541 319 aa8.97□□□□□ -0.97
RNF40-204ENST00000563683 CEACAM21Q3KPI0 293 aa8.97□□□□□ -0.97
RNF40-204ENST00000563683 FBXW9Q5XUX1 488 aa8.97□□□□□ -0.97
RNF40-204ENST00000563683 TMEM183AQ8IXX5 376 aa8.97□□□□□ -0.97
RNF40-204ENST00000563683 TPRX1Q8N7U7 411 aa8.97□□□□□ -0.97
RNF40-204ENST00000563683 DECR2Q9NUI1 292 aa8.97□□□□□ -0.97
RNF40-204ENST00000563683 FOXJ2Q9P0K8 574 aa8.97□□□□□ -0.97
RNF40-204ENST00000563683 V9GYS6 101 aa8.97□□□□□ -0.97
RNF40-204ENST00000563683 PCNX3Q9H6A9 2034 aa8.97□□□□□ -0.97
RNF40-204ENST00000563683 SHANK1Q9Y566 2161 aa8.97□□□□□ -0.97
RNF40-204ENST00000563683 C21orf140B9A014 251 aa8.96□□□□□ -0.97
RNF40-204ENST00000563683 SOX15O60248 233 aa8.96□□□□□ -0.97
RNF40-204ENST00000563683 PSG2P11465 335 aa8.96□□□□□ -0.97
RNF40-204ENST00000563683 SELEP16581 610 aa8.96□□□□□ -0.97
RNF40-204ENST00000563683 MPV17LQ2QL34 196 aa8.96□□□□□ -0.97
RNF40-204ENST00000563683 UNQ6494/PRO21346Q6UXR6 183 aa8.96□□□□□ -0.97
RNF40-204ENST00000563683 OR1K1Q8NGR3 316 aa8.96□□□□□ -0.97
RNF40-204ENST00000563683 FGFBP3Q8TAT2 258 aa8.96□□□□□ -0.97
RNF40-204ENST00000563683 ABHD5Q8WTS1 349 aa8.96□□□□□ -0.97
RNF40-204ENST00000563683 RCC1LQ96I51 464 aaKnown RBP8.96□□□□□ -0.97
RNF40-204ENST00000563683 ACTR3CQ9C0K3 210 aaPredicted RBP8.96□□□□□ -0.97
RNF40-204ENST00000563683 OR2D2Q9H210 308 aa8.96□□□□□ -0.97
RNF40-204ENST00000563683 FOXD3Q9UJU5 478 aaPredicted RBP8.96□□□□□ -0.97
RNF40-204ENST00000563683 HSF4Q9ULV5 492 aa8.96□□□□□ -0.97
RNF40-204ENST00000563683 SPRY3O43610 288 aa8.96□□□□□ -0.97
RNF40-204ENST00000563683 PITX3O75364 302 aa8.96□□□□□ -0.97
RNF40-204ENST00000563683 CDS2O95674 445 aa8.96□□□□□ -0.97
RNF40-204ENST00000563683 GCGP01275 180 aa8.96□□□□□ -0.97
RNF40-204ENST00000563683 OPN1MWP04001 364 aa8.96□□□□□ -0.97
RNF40-204ENST00000563683 OPN1MW2P0DN77 364 aa8.96□□□□□ -0.97
RNF40-204ENST00000563683 OPN1MW3P0DN78 364 aa8.96□□□□□ -0.97
RNF40-204ENST00000563683 SFTPCP11686 197 aa8.96□□□□□ -0.97
RNF40-204ENST00000563683 ZNF83P51522 516 aa8.96□□□□□ -0.97
RNF40-204ENST00000563683 CCL20P78556 96 aa8.96□□□□□ -0.97
RNF40-204ENST00000563683 BTNL3Q6UXE8 466 aa8.96□□□□□ -0.97
RNF40-204ENST00000563683 DPPA3Q6W0C5 159 aa8.96□□□□□ -0.97
RNF40-204ENST00000563683 NUFIP2Q7Z417 695 aaKnown RBP8.96□□□□□ -0.97
RNF40-204ENST00000563683 OR10G4Q8NGN3 311 aa8.96□□□□□ -0.97
RNF40-204ENST00000563683 SLC25A40Q8TBP6 338 aa8.96□□□□□ -0.97
RNF40-204ENST00000563683 HIPK2Q9H2X6 1198 aa8.96□□□□□ -0.97
RNF40-204ENST00000563683 DEPPQ9NTK1 212 aa8.96□□□□□ -0.97
RNF40-204ENST00000563683 PSG11Q9UQ72 335 aa8.96□□□□□ -0.97
RNF40-204ENST00000563683 LOC102723996A0A087X1L8 192 aa8.96□□□□□ -0.98
RNF40-204ENST00000563683 IGLV3-32A0A0A0MS00 114 aa8.96□□□□□ -0.98
RNF40-204ENST00000563683 SPAARA0A1B0GVQ0 90 aa8.96□□□□□ -0.98
RNF40-204ENST00000563683 TMEM30CPA0ZSE6 113 aa8.96□□□□□ -0.98
RNF40-204ENST00000563683 LNP1A1A4G5 178 aa8.96□□□□□ -0.98
RNF40-204ENST00000563683 FGF12P61328 243 aa8.96□□□□□ -0.98
RNF40-204ENST00000563683 RPP30P78346 268 aaKnown RBP8.96□□□□□ -0.98
RNF40-204ENST00000563683 RPL19P84098 196 aaKnown RBP8.96□□□□□ -0.98
RNF40-204ENST00000563683 ICAM4Q14773 271 aa8.96□□□□□ -0.98
RNF40-204ENST00000563683 SPSB3Q6PJ21 355 aa8.96□□□□□ -0.98
RNF40-204ENST00000563683 ZIC4Q8N9L1 334 aa8.96□□□□□ -0.98
RNF40-204ENST00000563683 SNX22Q96L94 193 aa8.96□□□□□ -0.98
RNF40-204ENST00000563683 ZNF552Q9H707 407 aaPredicted RBP8.96□□□□□ -0.98
RNF40-204ENST00000563683 GAB2Q9UQC2 676 aa8.96□□□□□ -0.98
RNF40-204ENST00000563683 CBY1Q9Y3M2 126 aa8.96□□□□□ -0.98
RNF40-204ENST00000563683 OR2W1Q9Y3N9 320 aa8.96□□□□□ -0.98
RNF40-204ENST00000563683 ZNF318Q5VUA4 2279 aa8.96□□□□□ -0.98
RNF40-204ENST00000563683 BDP1A6H8Y1 2624 aa8.96□□□□□ -0.98
RNF40-204ENST00000563683 CD200P41217 278 aa8.95□□□□□ -0.98
RNF40-204ENST00000563683 Q8IYB0 196 aa8.95□□□□□ -0.98
RNF40-204ENST00000563683 TM2D1Q9BX74 207 aa8.95□□□□□ -0.98
RNF40-204ENST00000563683 IL36RNQ9UBH0 155 aa8.95□□□□□ -0.98
RNF40-204ENST00000563683 TRAV17A0A0B4J275 112 aa8.95□□□□□ -0.98
RNF40-204ENST00000563683 ZNF705GA8MUZ8 300 aaPredicted RBP8.95□□□□□ -0.98
RNF40-204ENST00000563683 E9PLN8 166 aa8.95□□□□□ -0.98
RNF40-204ENST00000563683 SYNGR2O43760 224 aa8.95□□□□□ -0.98
RNF40-204ENST00000563683 CYB5R3P00387 301 aaPredicted RBP8.95□□□□□ -0.98
RNF40-204ENST00000563683 TMEM252Q8N6L7 170 aa8.95□□□□□ -0.98
RNF40-204ENST00000563683 CPEB3Q8NE35 698 aaKnown RBP8.95□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 180.8 ms