RNA–Protein interactions for RNA: ENST00000563239.1

UBR1-204, Transcript of ubiquitin protein ligase E3 component n-recognin 1, humanhuman

TSL 3

Gene UBR1, Length 545 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR1-204ENST00000563239 BLCAPP62952 87 aa6.83□□□□□ -1.32
UBR1-204ENST00000563239 SRSF4Q08170 494 aaKnown RBP6.83□□□□□ -1.32
UBR1-204ENST00000563239 EBI3Q14213 229 aa6.83□□□□□ -1.32
UBR1-204ENST00000563239 HERPUD1Q15011 391 aa6.83□□□□□ -1.32
UBR1-204ENST00000563239 ZNF260Q3ZCT1 412 aa6.83□□□□□ -1.32
UBR1-204ENST00000563239 CDNFQ49AH0 187 aa6.83□□□□□ -1.32
UBR1-204ENST00000563239 THNSL2Q86YJ6 484 aa6.83□□□□□ -1.32
UBR1-204ENST00000563239 Q8N2B8 174 aa6.83□□□□□ -1.32
UBR1-204ENST00000563239 DRAM1Q8N682 238 aa6.83□□□□□ -1.32
UBR1-204ENST00000563239 C3orf56Q8N813 242 aa6.83□□□□□ -1.32
UBR1-204ENST00000563239 RTN4IP1Q8WWV3 396 aaPredicted RBP6.83□□□□□ -1.32
UBR1-204ENST00000563239 IL1F10Q8WWZ1 152 aa6.83□□□□□ -1.32
UBR1-204ENST00000563239 SLC25A46Q96AG3 418 aa6.83□□□□□ -1.32
UBR1-204ENST00000563239 RPEQ96AT9 228 aa6.83□□□□□ -1.32
UBR1-204ENST00000563239 IFI27L2Q9H2X8 130 aa6.83□□□□□ -1.32
UBR1-204ENST00000563239 ZNF702PQ9H963 129 aa6.83□□□□□ -1.32
UBR1-204ENST00000563239 BEX1Q9HBH7 125 aa6.83□□□□□ -1.32
UBR1-204ENST00000563239 RAB9BQ9NP90 201 aa6.83□□□□□ -1.32
UBR1-204ENST00000563239 RHBDL2Q9NX52 303 aa6.83□□□□□ -1.32
UBR1-204ENST00000563239 OR1A1Q9P1Q5 309 aa6.83□□□□□ -1.32
UBR1-204ENST00000563239 ZNF230Q9UIE0 474 aaPredicted RBP6.83□□□□□ -1.32
UBR1-204ENST00000563239 SPATA2Q9UM82 520 aa6.83□□□□□ -1.32
UBR1-204ENST00000563239 ETV7Q9Y603 341 aa6.83□□□□□ -1.32
UBR1-204ENST00000563239 TRRAPQ9Y4A5 3859 aa6.82□□□□□ -1.32
UBR1-204ENST00000563239 A0A1B0GUS0 222 aa6.82□□□□□ -1.32
UBR1-204ENST00000563239 SERPINE3A8MV23 424 aa6.82□□□□□ -1.32
UBR1-204ENST00000563239 ZNF736B4DX44 427 aaPredicted RBP6.82□□□□□ -1.32
UBR1-204ENST00000563239 TMEM127O75204 238 aa6.82□□□□□ -1.32
UBR1-204ENST00000563239 PROP1O75360 226 aa6.82□□□□□ -1.32
UBR1-204ENST00000563239 GAPDHP04406 335 aaKnown RBP6.82□□□□□ -1.32
UBR1-204ENST00000563239 SNRNP70P08621 437 aaKnown RBP6.82□□□□□ -1.32
UBR1-204ENST00000563239 CD3GP09693 182 aa6.82□□□□□ -1.32
UBR1-204ENST00000563239 GSTT2P0CG29 244 aa6.82□□□□□ -1.32
UBR1-204ENST00000563239 GSTT2BP0CG30 244 aa6.82□□□□□ -1.32
UBR1-204ENST00000563239 BRS3P32247 399 aa6.82□□□□□ -1.32
UBR1-204ENST00000563239 OR3A3P47888 321 aa6.82□□□□□ -1.32
UBR1-204ENST00000563239 SERPINB10P48595 397 aa6.82□□□□□ -1.32
UBR1-204ENST00000563239 RAB7AP51149 207 aa6.82□□□□□ -1.32
UBR1-204ENST00000563239 SRSF7Q16629 238 aaKnown RBP eCLIP6.82□□□□□ -1.32
UBR1-204ENST00000563239 GPR107Q5VW38 600 aa6.82□□□□□ -1.32
UBR1-204ENST00000563239 HACD4Q5VWC8 232 aa6.82□□□□□ -1.32
UBR1-204ENST00000563239 CCDC144NLQ6NUI1 221 aa6.82□□□□□ -1.32
UBR1-204ENST00000563239 Q6ZS49 121 aa6.82□□□□□ -1.32
UBR1-204ENST00000563239 CROCCP3Q8IVE0 287 aa6.82□□□□□ -1.32
UBR1-204ENST00000563239 OR8H3Q8N146 312 aa6.82□□□□□ -1.32
UBR1-204ENST00000563239 Q8N6K4 173 aa6.82□□□□□ -1.32
UBR1-204ENST00000563239 OR56B4Q8NH76 319 aa6.82□□□□□ -1.32
UBR1-204ENST00000563239 CAPSLQ8WWF8 208 aa6.82□□□□□ -1.32
UBR1-204ENST00000563239 WFDC12Q8WWY7 111 aa6.82□□□□□ -1.32
UBR1-204ENST00000563239 MAFIPQ8WZ33 124 aa6.82□□□□□ -1.32
UBR1-204ENST00000563239 RBM14Q96PK6 669 aaKnown RBP6.82□□□□□ -1.32
UBR1-204ENST00000563239 ZNF251Q9BRH9 671 aa6.82□□□□□ -1.32
UBR1-204ENST00000563239 AGMATQ9BSE5 352 aa6.82□□□□□ -1.32
UBR1-204ENST00000563239 ABHD14AQ9BUJ0 271 aa6.82□□□□□ -1.32
UBR1-204ENST00000563239 TOLLIPQ9H0E2 274 aa6.82□□□□□ -1.32
UBR1-204ENST00000563239 RANBP3Q9H6Z4 567 aaPredicted RBP6.82□□□□□ -1.32
UBR1-204ENST00000563239 RAB18Q9NP72 206 aa6.82□□□□□ -1.32
UBR1-204ENST00000563239 ABRACLQ9P1F3 81 aa6.82□□□□□ -1.32
UBR1-204ENST00000563239 PITPNC1Q9UKF7 332 aa6.82□□□□□ -1.32
UBR1-204ENST00000563239 MGAT4AQ9UM21 535 aa6.82□□□□□ -1.32
UBR1-204ENST00000563239 RNF114Q9Y508 228 aa6.82□□□□□ -1.32
UBR1-204ENST00000563239 TRAV18A0A075B6X5 111 aa6.81□□□□□ -1.32
UBR1-204ENST00000563239 IGHV3-72A0A0B4J1Y9 119 aa6.81□□□□□ -1.32
UBR1-204ENST00000563239 TMEM235A6NFC5 223 aa6.81□□□□□ -1.32
UBR1-204ENST00000563239 ITGB1BP1O14713 200 aa6.81□□□□□ -1.32
UBR1-204ENST00000563239 ST8SIA5O15466 376 aa6.81□□□□□ -1.32
UBR1-204ENST00000563239 FABP7O15540 132 aa6.81□□□□□ -1.32
UBR1-204ENST00000563239 LANCL1O43813 399 aa6.81□□□□□ -1.32
UBR1-204ENST00000563239 OR2F2O95006 317 aa6.81□□□□□ -1.32
UBR1-204ENST00000563239 IGKV1D-33P01593 117 aa6.81□□□□□ -1.32
UBR1-204ENST00000563239 IGKV1-33P01594 117 aa6.81□□□□□ -1.32
UBR1-204ENST00000563239 GSTP1P09211 210 aaKnown RBP6.81□□□□□ -1.32
UBR1-204ENST00000563239 CEACAM6P40199 344 aa6.81□□□□□ -1.32
UBR1-204ENST00000563239 MNDAP41218 407 aa6.81□□□□□ -1.32
UBR1-204ENST00000563239 IGSF11Q5DX21 431 aa6.81□□□□□ -1.32
UBR1-204ENST00000563239 ZNF833PQ6ZTB9 187 aa6.81□□□□□ -1.32
UBR1-204ENST00000563239 MOB3BQ86TA1 216 aa6.81□□□□□ -1.32
UBR1-204ENST00000563239 IZUMO1Q8IYV9 350 aa6.81□□□□□ -1.32
UBR1-204ENST00000563239 LYG1Q8N1E2 194 aa6.81□□□□□ -1.32
UBR1-204ENST00000563239 OR4A4PQ8NGN8 299 aa6.81□□□□□ -1.32
UBR1-204ENST00000563239 OR4C13Q8NGP0 309 aa6.81□□□□□ -1.32
UBR1-204ENST00000563239 WIPF2Q8TF74 440 aaPredicted RBP6.81□□□□□ -1.32
UBR1-204ENST00000563239 NUDCD2Q8WVJ2 157 aa6.81□□□□□ -1.32
UBR1-204ENST00000563239 CITED1Q99966 193 aa6.81□□□□□ -1.32
UBR1-204ENST00000563239 SLC25A33Q9BSK2 321 aa6.81□□□□□ -1.32
UBR1-204ENST00000563239 CABLES2Q9BTV7 478 aa6.81□□□□□ -1.32
UBR1-204ENST00000563239 NPFFR1Q9GZQ6 430 aa6.81□□□□□ -1.32
UBR1-204ENST00000563239 C11orf54Q9H0W9 315 aaPredicted RBP6.81□□□□□ -1.32
UBR1-204ENST00000563239 ABCG5Q9H222 651 aa6.81□□□□□ -1.32
UBR1-204ENST00000563239 AUNIPQ9H7T9 357 aa6.81□□□□□ -1.32
UBR1-204ENST00000563239 SERTAD4Q9NUC0 356 aa6.81□□□□□ -1.32
UBR1-204ENST00000563239 SLC23A1Q9UHI7 598 aa6.81□□□□□ -1.32
UBR1-204ENST00000563239 CMYA5Q8N3K9 4069 aa6.81□□□□□ -1.32
UBR1-204ENST00000563239 SAA2-SAA4A0A096LPE2 208 aa6.8□□□□□ -1.32
UBR1-204ENST00000563239 TRBV6-7A0A0A0MS04 114 aa6.8□□□□□ -1.32
UBR1-204ENST00000563239 A0A0A6YYH2 397 aa6.8□□□□□ -1.32
UBR1-204ENST00000563239 A6NJ64 397 aa6.8□□□□□ -1.32
UBR1-204ENST00000563239 SH2D7A6NKC9 451 aaPredicted RBP6.8□□□□□ -1.32
UBR1-204ENST00000563239 SCGNO76038 276 aa6.8□□□□□ -1.32
UBR1-204ENST00000563239 RGS11O94810 467 aa6.8□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 10.3 ms