RNA–Protein interactions for RNA: ENST00000562722.1

SF3B3-202, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 2

Gene SF3B3, Length 881 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-202ENST00000562722 SBSPONQ8IVN8 264 aa10.08□□□□□ -0.8
SF3B3-202ENST00000562722 GAPTQ8N292 157 aa10.08□□□□□ -0.8
SF3B3-202ENST00000562722 OR2AK2Q8NG84 335 aa10.08□□□□□ -0.8
SF3B3-202ENST00000562722 FAM46BQ96A09 425 aa10.08□□□□□ -0.8
SF3B3-202ENST00000562722 RITA1Q96K30 269 aa10.08□□□□□ -0.8
SF3B3-202ENST00000562722 NABP2Q9BQ15 211 aa10.08□□□□□ -0.8
SF3B3-202ENST00000562722 CST11Q9H112 138 aa10.08□□□□□ -0.8
SF3B3-202ENST00000562722 FAM53CQ9NYF3 392 aa10.08□□□□□ -0.8
SF3B3-202ENST00000562722 CLEC2DQ9UHP7 191 aa10.08□□□□□ -0.8
SF3B3-202ENST00000562722 DIMT1Q9UNQ2 313 aaKnown RBP10.08□□□□□ -0.8
SF3B3-202ENST00000562722 HUWE1Q7Z6Z7 4374 aaKnown RBP10.08□□□□□ -0.8
SF3B3-202ENST00000562722 A0A1W2PN81 502 aa10.07□□□□□ -0.8
SF3B3-202ENST00000562722 FAM90A10PA6NDY2 464 aa10.07□□□□□ -0.8
SF3B3-202ENST00000562722 FAM90A7PA6NKC0 464 aa10.07□□□□□ -0.8
SF3B3-202ENST00000562722 FAM90A23PA8MXZ1 464 aa10.07□□□□□ -0.8
SF3B3-202ENST00000562722 LINC01619G3V211 115 aa10.07□□□□□ -0.8
SF3B3-202ENST00000562722 PDCD6O75340 191 aa10.07□□□□□ -0.8
SF3B3-202ENST00000562722 GPX5O75715 221 aa10.07□□□□□ -0.8
SF3B3-202ENST00000562722 SC5DO75845 299 aa10.07□□□□□ -0.8
SF3B3-202ENST00000562722 SPNP16150 400 aa10.07□□□□□ -0.8
SF3B3-202ENST00000562722 CHRNA7P36544 502 aa10.07□□□□□ -0.8
SF3B3-202ENST00000562722 CAPGP40121 348 aa10.07□□□□□ -0.8
SF3B3-202ENST00000562722 SLURP1P55000 103 aa10.07□□□□□ -0.8
SF3B3-202ENST00000562722 KIAA0141Q14154 515 aaPredicted RBP10.07□□□□□ -0.8
SF3B3-202ENST00000562722 CASC10Q5T4H9 136 aa10.07□□□□□ -0.8
SF3B3-202ENST00000562722 DMKNQ6E0U4 476 aaPredicted RBP10.07□□□□□ -0.8
SF3B3-202ENST00000562722 C5orf24Q7Z6I8 188 aa10.07□□□□□ -0.8
SF3B3-202ENST00000562722 PQLC1Q8N2U9 271 aa10.07□□□□□ -0.8
SF3B3-202ENST00000562722 CASTOR1Q8WTX7 329 aa10.07□□□□□ -0.8
SF3B3-202ENST00000562722 DLX4Q92988 240 aaPredicted RBP10.07□□□□□ -0.8
SF3B3-202ENST00000562722 GALMQ96C23 342 aa10.07□□□□□ -0.8
SF3B3-202ENST00000562722 TMEM80Q96HE8 168 aa10.07□□□□□ -0.8
SF3B3-202ENST00000562722 RDH12Q96NR8 316 aa10.07□□□□□ -0.8
SF3B3-202ENST00000562722 GHITMQ9H3K2 345 aa10.07□□□□□ -0.8
SF3B3-202ENST00000562722 ZMAT4Q9H898 229 aa10.07□□□□□ -0.8
SF3B3-202ENST00000562722 SMPD3Q9NY59 655 aaPredicted RBP10.07□□□□□ -0.8
SF3B3-202ENST00000562722 ABRACLQ9P1F3 81 aa10.07□□□□□ -0.8
SF3B3-202ENST00000562722 SAA2-SAA4A0A096LPE2 208 aa10.06□□□□□ -0.8
SF3B3-202ENST00000562722 TRBV5-7A0A0A0MS05 114 aa10.06□□□□□ -0.8
SF3B3-202ENST00000562722 BAG2O95816 211 aa10.06□□□□□ -0.8
SF3B3-202ENST00000562722 GLAP06280 429 aa10.06□□□□□ -0.8
SF3B3-202ENST00000562722 FRMD6-AS1P0C7T7 363 aa10.06□□□□□ -0.8
SF3B3-202ENST00000562722 SAA2P0DJI9 122 aaPredicted RBP10.06□□□□□ -0.8
SF3B3-202ENST00000562722 LYL1P12980 280 aa10.06□□□□□ -0.8
SF3B3-202ENST00000562722 GP9P14770 177 aa10.06□□□□□ -0.8
SF3B3-202ENST00000562722 RPS11P62280 158 aaKnown RBP eCLIP10.06□□□□□ -0.8
SF3B3-202ENST00000562722 HTD2P86397 168 aa10.06□□□□□ -0.8
SF3B3-202ENST00000562722 ZNF833PQ6ZTB9 187 aa10.06□□□□□ -0.8
SF3B3-202ENST00000562722 ZNF554Q86TJ5 538 aa10.06□□□□□ -0.8
SF3B3-202ENST00000562722 ODF3L1Q8IXM7 274 aa10.06□□□□□ -0.8
SF3B3-202ENST00000562722 MINDY2Q8NBR6 621 aa10.06□□□□□ -0.8
SF3B3-202ENST00000562722 OR6Q1Q8NGQ2 317 aa10.06□□□□□ -0.8
SF3B3-202ENST00000562722 MRPL30Q8TCC3 161 aaKnown RBP10.06□□□□□ -0.8
SF3B3-202ENST00000562722 CYGBQ8WWM9 190 aa10.06□□□□□ -0.8
SF3B3-202ENST00000562722 IL1F10Q8WWZ1 152 aa10.06□□□□□ -0.8
SF3B3-202ENST00000562722 ARPC1AQ92747 370 aa10.06□□□□□ -0.8
SF3B3-202ENST00000562722 CYYR1Q96J86 154 aa10.06□□□□□ -0.8
SF3B3-202ENST00000562722 PGLYRP3Q96LB9 341 aa10.06□□□□□ -0.8
SF3B3-202ENST00000562722 Q96M66 194 aa10.06□□□□□ -0.8
SF3B3-202ENST00000562722 NEDD4LQ96PU5 975 aa10.06□□□□□ -0.8
SF3B3-202ENST00000562722 S100A14Q9HCY8 104 aa10.06□□□□□ -0.8
SF3B3-202ENST00000562722 MBNL3Q9NUK0 354 aaKnown RBP10.06□□□□□ -0.8
SF3B3-202ENST00000562722 STEAP1Q9UHE8 339 aa10.06□□□□□ -0.8
SF3B3-202ENST00000562722 FOXA2Q9Y261 457 aaPredicted RBP10.06□□□□□ -0.8
SF3B3-202ENST00000562722 ST8SIA5O15466 376 aa10.05□□□□□ -0.8
SF3B3-202ENST00000562722 YPEL1O60688 119 aa10.05□□□□□ -0.8
SF3B3-202ENST00000562722 IGHV3-11P01762 117 aa10.05□□□□□ -0.8
SF3B3-202ENST00000562722 LGALS1P09382 135 aaKnown RBP10.05□□□□□ -0.8
SF3B3-202ENST00000562722 OR8U9P0C7N5 309 aa10.05□□□□□ -0.8
SF3B3-202ENST00000562722 TAS2R43P59537 309 aa10.05□□□□□ -0.8
SF3B3-202ENST00000562722 PITPNAQ00169 270 aa10.05□□□□□ -0.8
SF3B3-202ENST00000562722 DOC2BQ14184 412 aa10.05□□□□□ -0.8
SF3B3-202ENST00000562722 SRSF7Q16629 238 aaKnown RBP eCLIP10.05□□□□□ -0.8
SF3B3-202ENST00000562722 SIGIRRQ6IA17 410 aa10.05□□□□□ -0.8
SF3B3-202ENST00000562722 FAM131AQ6UXB0 335 aa10.05□□□□□ -0.8
SF3B3-202ENST00000562722 CDH26Q8IXH8 852 aa10.05□□□□□ -0.8
SF3B3-202ENST00000562722 NKAIN3Q8N8D7 197 aa10.05□□□□□ -0.8
SF3B3-202ENST00000562722 NPBQ8NG41 125 aa10.05□□□□□ -0.8
SF3B3-202ENST00000562722 SETD6Q8TBK2 473 aa10.05□□□□□ -0.8
SF3B3-202ENST00000562722 DERL3Q96Q80 235 aa10.05□□□□□ -0.8
SF3B3-202ENST00000562722 YPEL2Q96QA6 119 aa10.05□□□□□ -0.8
SF3B3-202ENST00000562722 TOLLIPQ9H0E2 274 aa10.05□□□□□ -0.8
SF3B3-202ENST00000562722 FBXL15Q9H469 300 aa10.05□□□□□ -0.8
SF3B3-202ENST00000562722 CHMP1AQ9HD42 196 aaPredicted RBP10.05□□□□□ -0.8
SF3B3-202ENST00000562722 LRRC42Q9Y546 428 aa10.05□□□□□ -0.8
SF3B3-202ENST00000562722 DYNC2H1Q8NCM8 4307 aaKnown RBP10.04□□□□□ -0.8
SF3B3-202ENST00000562722 IGHV4OR15-8A0A075B7B6 117 aa10.04□□□□□ -0.8
SF3B3-202ENST00000562722 A0A087WW49 117 aa10.04□□□□□ -0.8
SF3B3-202ENST00000562722 H7C2Y5 167 aa10.04□□□□□ -0.8
SF3B3-202ENST00000562722 NDUFA3O95167 84 aa10.04□□□□□ -0.8
SF3B3-202ENST00000562722 GSTP1P09211 210 aaKnown RBP10.04□□□□□ -0.8
SF3B3-202ENST00000562722 CD40LGP29965 261 aa10.04□□□□□ -0.8
SF3B3-202ENST00000562722 NDPQ00604 133 aa10.04□□□□□ -0.8
SF3B3-202ENST00000562722 TMEM267Q0VDI3 215 aaPredicted RBP10.04□□□□□ -0.8
SF3B3-202ENST00000562722 LRRC36Q1X8D7 754 aa10.04□□□□□ -0.8
SF3B3-202ENST00000562722 ZNF660Q6AZW8 331 aaPredicted RBP10.04□□□□□ -0.8
SF3B3-202ENST00000562722 TCTEX1D1Q8N7M0 179 aa10.04□□□□□ -0.8
SF3B3-202ENST00000562722 MS4A10Q96PG2 267 aa10.04□□□□□ -0.8
SF3B3-202ENST00000562722 OR4C12Q96R67 309 aa10.04□□□□□ -0.8
SF3B3-202ENST00000562722 UQCC2Q9BRT2 126 aa10.04□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 44.8 ms