RNA–Protein interactions for RNA: ENST00000562668.1

SMG1-206, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 3

Gene SMG1, Length 449 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-206ENST00000562668 FN1P02751 2386 aaKnown RBP3.67□□□□□ -1.82
SMG1-206ENST00000562668 NF1P21359 2839 aa3.66□□□□□ -1.82
SMG1-206ENST00000562668 A0A0A6YYD4 124 aa3.66□□□□□ -1.82
SMG1-206ENST00000562668 TRAV1-2A0A0B4J238 106 aa3.66□□□□□ -1.82
SMG1-206ENST00000562668 TRAV24A0A0B4J272 114 aa3.66□□□□□ -1.82
SMG1-206ENST00000562668 KIR2DS1A0A191URI9 304 aa3.66□□□□□ -1.82
SMG1-206ENST00000562668 ISPDA4D126 451 aa3.66□□□□□ -1.82
SMG1-206ENST00000562668 RFPL4AA6NLU0 287 aa3.66□□□□□ -1.82
SMG1-206ENST00000562668 TMEM14DPA8MWL7 114 aa3.66□□□□□ -1.82
SMG1-206ENST00000562668 B4DSR2 109 aa3.66□□□□□ -1.82
SMG1-206ENST00000562668 RFPL4AL1F8VTS6 287 aa3.66□□□□□ -1.82
SMG1-206ENST00000562668 K7N7A8 449 aa3.66□□□□□ -1.82
SMG1-206ENST00000562668 SLC22A1O15245 554 aa3.66□□□□□ -1.82
SMG1-206ENST00000562668 ADAM20O43506 726 aa3.66□□□□□ -1.82
SMG1-206ENST00000562668 CDRT1O95170 752 aa3.66□□□□□ -1.82
SMG1-206ENST00000562668 LIPFP07098 398 aa3.66□□□□□ -1.82
SMG1-206ENST00000562668 HCKP08631 526 aa3.66□□□□□ -1.82
SMG1-206ENST00000562668 CALCBP10092 127 aa3.66□□□□□ -1.82
SMG1-206ENST00000562668 MMP9P14780 707 aa3.66□□□□□ -1.82
SMG1-206ENST00000562668 RPS2P15880 293 aaKnown RBP3.66□□□□□ -1.82
SMG1-206ENST00000562668 CD36P16671 472 aa3.66□□□□□ -1.82
SMG1-206ENST00000562668 MAPK3P27361 379 aaPredicted RBP3.66□□□□□ -1.82
SMG1-206ENST00000562668 CALRP27797 417 aaKnown RBP3.66□□□□□ -1.82
SMG1-206ENST00000562668 PSMB9P28065 219 aa3.66□□□□□ -1.82
SMG1-206ENST00000562668 PRDX2P32119 198 aa3.66□□□□□ -1.82
SMG1-206ENST00000562668 TGFBR1P36897 503 aa3.66□□□□□ -1.82
SMG1-206ENST00000562668 PTGFRP43088 359 aa3.66□□□□□ -1.82
SMG1-206ENST00000562668 PITPNBP48739 271 aa3.66□□□□□ -1.82
SMG1-206ENST00000562668 POU3F4P49335 361 aa3.66□□□□□ -1.82
SMG1-206ENST00000562668 NPY4RP50391 375 aa3.66□□□□□ -1.82
SMG1-206ENST00000562668 F2RL1P55085 397 aa3.66□□□□□ -1.82
SMG1-206ENST00000562668 DLX6P56179 175 aa3.66□□□□□ -1.82
SMG1-206ENST00000562668 CAV3P56539 151 aa3.66□□□□□ -1.82
SMG1-206ENST00000562668 OR10A3P58181 314 aa3.66□□□□□ -1.82
SMG1-206ENST00000562668 GMFBP60983 142 aa3.66□□□□□ -1.82
SMG1-206ENST00000562668 FGF12P61328 243 aa3.66□□□□□ -1.82
SMG1-206ENST00000562668 LCN2P80188 198 aa3.66□□□□□ -1.82
SMG1-206ENST00000562668 PAX5Q02548 391 aa3.66□□□□□ -1.82
SMG1-206ENST00000562668 PAX8Q06710 450 aa3.66□□□□□ -1.82
SMG1-206ENST00000562668 PLA2G7Q13093 441 aa3.66□□□□□ -1.82
SMG1-206ENST00000562668 UNC119Q13432 240 aa3.66□□□□□ -1.82
SMG1-206ENST00000562668 MICBQ29980 383 aa3.66□□□□□ -1.82
SMG1-206ENST00000562668 SMIM21Q3B7S5 101 aa3.66□□□□□ -1.82
SMG1-206ENST00000562668 KLF17Q5JT82 389 aaPredicted RBP3.66□□□□□ -1.82
SMG1-206ENST00000562668 SPIN3Q5JUX0 258 aa3.66□□□□□ -1.82
SMG1-206ENST00000562668 FFAR4Q5NUL3 377 aa3.66□□□□□ -1.82
SMG1-206ENST00000562668 C22orf42Q6IC83 251 aa3.66□□□□□ -1.82
SMG1-206ENST00000562668 Q71RC1 249 aaPredicted RBP3.66□□□□□ -1.82
SMG1-206ENST00000562668 RTN4RL2Q86UN3 420 aa3.66□□□□□ -1.82
SMG1-206ENST00000562668 MKXQ8IYA7 352 aa3.66□□□□□ -1.82
SMG1-206ENST00000562668 FAM58AQ8N1B3 248 aa3.66□□□□□ -1.82
SMG1-206ENST00000562668 Q8N7P7 452 aa3.66□□□□□ -1.82
SMG1-206ENST00000562668 NKAIN3Q8N8D7 197 aa3.66□□□□□ -1.82
SMG1-206ENST00000562668 ZNRF1Q8ND25 227 aa3.66□□□□□ -1.82
SMG1-206ENST00000562668 TMEM104Q8NE00 496 aa3.66□□□□□ -1.82
SMG1-206ENST00000562668 OR10K1Q8NGX5 313 aa3.66□□□□□ -1.82
SMG1-206ENST00000562668 C8orf46Q8TAG6 207 aa3.66□□□□□ -1.82
SMG1-206ENST00000562668 TNFAIP8L1Q8WVP5 186 aa3.66□□□□□ -1.82
SMG1-206ENST00000562668 THRSPQ92748 146 aa3.66□□□□□ -1.82
SMG1-206ENST00000562668 EMG1Q92979 244 aaKnown RBP3.66□□□□□ -1.82
SMG1-206ENST00000562668 TMEM186Q96B77 213 aa3.66□□□□□ -1.82
SMG1-206ENST00000562668 RAB39BQ96DA2 213 aa3.66□□□□□ -1.82
SMG1-206ENST00000562668 UQCC2Q9BRT2 126 aa3.66□□□□□ -1.82
SMG1-206ENST00000562668 CENPOQ9BU64 300 aa3.66□□□□□ -1.82
SMG1-206ENST00000562668 MCRIP2Q9BUT9 160 aaKnown RBP3.66□□□□□ -1.82
SMG1-206ENST00000562668 NAA50Q9GZZ1 169 aaKnown RBP3.66□□□□□ -1.82
SMG1-206ENST00000562668 KCNK15Q9H427 330 aa3.66□□□□□ -1.82
SMG1-206ENST00000562668 PCDHB16Q9NRJ7 776 aa3.66□□□□□ -1.82
SMG1-206ENST00000562668 RCC2Q9P258 522 aaKnown RBP3.66□□□□□ -1.82
SMG1-206ENST00000562668 STUB1Q9UNE7 303 aa3.66□□□□□ -1.82
SMG1-206ENST00000562668 AK6Q9Y3D8 172 aaKnown RBP3.66□□□□□ -1.82
SMG1-206ENST00000562668 INSIG2Q9Y5U4 225 aa3.66□□□□□ -1.82
SMG1-206ENST00000562668 ABCA1O95477 2261 aa3.66□□□□□ -1.82
SMG1-206ENST00000562668 IGHV2-70DA0A0C4DH43 119 aa3.65□□□□□ -1.83
SMG1-206ENST00000562668 MEIOCA2RUB1 952 aa3.65□□□□□ -1.83
SMG1-206ENST00000562668 C15orf62A8K5M9 175 aa3.65□□□□□ -1.83
SMG1-206ENST00000562668 A8MV72 311 aaPredicted RBP3.65□□□□□ -1.83
SMG1-206ENST00000562668 SLC33A1O00400 549 aaPredicted RBP3.65□□□□□ -1.83
SMG1-206ENST00000562668 SLC17A2O00624 439 aa3.65□□□□□ -1.83
SMG1-206ENST00000562668 FOXH1O75593 365 aa3.65□□□□□ -1.83
SMG1-206ENST00000562668 ARL6IP5O75915 188 aa3.65□□□□□ -1.83
SMG1-206ENST00000562668 NXPH2O95156 264 aa3.65□□□□□ -1.83
SMG1-206ENST00000562668 GABARAPO95166 117 aa3.65□□□□□ -1.83
SMG1-206ENST00000562668 OR2H2O95918 312 aa3.65□□□□□ -1.83
SMG1-206ENST00000562668 HAND1O96004 215 aa3.65□□□□□ -1.83
SMG1-206ENST00000562668 TGFAP01135 160 aa3.65□□□□□ -1.83
SMG1-206ENST00000562668 CSN2P05814 226 aa3.65□□□□□ -1.83
SMG1-206ENST00000562668 FAM157CP0CG43 387 aa3.65□□□□□ -1.83
SMG1-206ENST00000562668 CGB3P0DN86 165 aa3.65□□□□□ -1.83
SMG1-206ENST00000562668 CGB7P0DN87 165 aa3.65□□□□□ -1.83
SMG1-206ENST00000562668 PRKACAP17612 351 aa3.65□□□□□ -1.83
SMG1-206ENST00000562668 OR3A1P47881 315 aa3.65□□□□□ -1.83
SMG1-206ENST00000562668 RBM11P57052 281 aaKnown RBP3.65□□□□□ -1.83
SMG1-206ENST00000562668 PPP3R1P63098 170 aa3.65□□□□□ -1.83
SMG1-206ENST00000562668 KCNJ8Q15842 424 aa3.65□□□□□ -1.83
SMG1-206ENST00000562668 PIGYQ3MUY2 71 aa3.65□□□□□ -1.83
SMG1-206ENST00000562668 FAM120AOSQ5T036 256 aa3.65□□□□□ -1.83
SMG1-206ENST00000562668 OR10K2Q6IF99 312 aa3.65□□□□□ -1.83
SMG1-206ENST00000562668 HCP5Q6MZN7 132 aa3.65□□□□□ -1.83
SMG1-206ENST00000562668 METAP1DQ6UB28 335 aaPredicted RBP3.65□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms