RNA–Protein interactions for RNA: ENST00000561425.5

TPM1-232, Transcript of tropomyosin 1, humanhuman

TSL 5

Gene TPM1, Length 582 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-232ENST00000561425 GNMTQ14749 295 aa16.37■□□□□ 0.21
TPM1-232ENST00000561425 ARSJQ5FYB0 599 aaPredicted RBP16.37■□□□□ 0.21
TPM1-232ENST00000561425 OR2T10Q8NGZ9 312 aa16.37■□□□□ 0.21
TPM1-232ENST00000561425 STEAP1Q9UHE8 339 aa16.37■□□□□ 0.21
TPM1-232ENST00000561425 IGHV3-72A0A0B4J1Y9 119 aa16.36■□□□□ 0.21
TPM1-232ENST00000561425 ZNF736B4DX44 427 aaPredicted RBP16.36■□□□□ 0.21
TPM1-232ENST00000561425 IGHG2P01859 326 aa16.36■□□□□ 0.21
TPM1-232ENST00000561425 CLDN12P56749 244 aa16.36■□□□□ 0.21
TPM1-232ENST00000561425 DEFA6Q01524 100 aa16.36■□□□□ 0.21
TPM1-232ENST00000561425 TGIF2LXQ8IUE1 241 aa16.36■□□□□ 0.21
TPM1-232ENST00000561425 LYG1Q8N1E2 194 aa16.36■□□□□ 0.21
TPM1-232ENST00000561425 AK3Q9UIJ7 227 aa16.36■□□□□ 0.21
TPM1-232ENST00000561425 IFITM5A6NNB3 132 aa16.35■□□□□ 0.21
TPM1-232ENST00000561425 PDCD5O14737 125 aa16.35■□□□□ 0.21
TPM1-232ENST00000561425 FGF9P31371 208 aaPredicted RBP16.35■□□□□ 0.21
TPM1-232ENST00000561425 PPP1CCP36873 323 aaKnown RBP16.35■□□□□ 0.21
TPM1-232ENST00000561425 PLA2G7Q13093 441 aa16.35■□□□□ 0.21
TPM1-232ENST00000561425 MOB1BQ7L9L4 216 aa16.35■□□□□ 0.21
TPM1-232ENST00000561425 Q8N9W7 124 aa16.35■□□□□ 0.21
TPM1-232ENST00000561425 ABHD14AQ9BUJ0 271 aa16.35■□□□□ 0.21
TPM1-232ENST00000561425 RAB22AQ9UL26 194 aa16.35■□□□□ 0.21
TPM1-232ENST00000561425 TMEM272A0A1B0GTI8 110 aa16.34■□□□□ 0.21
TPM1-232ENST00000561425 ITGB1BP1O14713 200 aa16.34■□□□□ 0.21
TPM1-232ENST00000561425 RGS11O94810 467 aa16.34■□□□□ 0.21
TPM1-232ENST00000561425 MOSP00540 346 aa16.34■□□□□ 0.21
TPM1-232ENST00000561425 VEGFCP49767 419 aa16.34■□□□□ 0.21
TPM1-232ENST00000561425 OR10A3P58181 314 aa16.34■□□□□ 0.21
TPM1-232ENST00000561425 NSUN5P1Q3KNT7 163 aa16.34■□□□□ 0.21
TPM1-232ENST00000561425 PLAC9Q5JTB6 97 aa16.34■□□□□ 0.21
TPM1-232ENST00000561425 C10orf99Q6UWK7 81 aa16.34■□□□□ 0.21
TPM1-232ENST00000561425 ZNF833PQ6ZTB9 187 aa16.34■□□□□ 0.21
TPM1-232ENST00000561425 NR2C2APQ86WQ0 139 aa16.34■□□□□ 0.21
TPM1-232ENST00000561425 OR8H1Q8NGG4 311 aa16.34■□□□□ 0.21
TPM1-232ENST00000561425 ARHGAP5-AS1Q96IT6 56 aa16.34■□□□□ 0.21
TPM1-232ENST00000561425 PECRQ9BY49 303 aa16.34■□□□□ 0.21
TPM1-232ENST00000561425 Q9N2K0 584 aa16.34■□□□□ 0.21
TPM1-232ENST00000561425 LIN7CQ9NUP9 197 aaKnown RBP16.34■□□□□ 0.21
TPM1-232ENST00000561425 KCNK7Q9Y2U2 307 aa16.34■□□□□ 0.21
TPM1-232ENST00000561425 C9orf152Q5JTZ5 239 aa16.33■□□□□ 0.2
TPM1-232ENST00000561425 HES5Q5TA89 166 aa16.33■□□□□ 0.2
TPM1-232ENST00000561425 WFDC9Q8NEX5 89 aa16.33■□□□□ 0.2
TPM1-232ENST00000561425 OR4F17Q8NGA8 305 aa16.33■□□□□ 0.2
TPM1-232ENST00000561425 OR56B1Q8NGI3 324 aa16.33■□□□□ 0.2
TPM1-232ENST00000561425 OR4F4Q96R69 305 aa16.33■□□□□ 0.2
TPM1-232ENST00000561425 HDHD3Q9BSH5 251 aaPredicted RBP16.33■□□□□ 0.2
TPM1-232ENST00000561425 ABCG5Q9H222 651 aa16.33■□□□□ 0.2
TPM1-232ENST00000561425 IFI27L2Q9H2X8 130 aa16.33■□□□□ 0.2
TPM1-232ENST00000561425 ABRACLQ9P1F3 81 aa16.33■□□□□ 0.2
TPM1-232ENST00000561425 MGAT4AQ9UM21 535 aa16.33■□□□□ 0.2
TPM1-232ENST00000561425 RAB3BP20337 219 aa16.32■□□□□ 0.2
TPM1-232ENST00000561425 LSAMPQ13449 338 aa16.32■□□□□ 0.2
TPM1-232ENST00000561425 KPRPQ5T749 579 aaPredicted RBP16.32■□□□□ 0.2
TPM1-232ENST00000561425 SAMD5Q5TGI4 173 aa16.32■□□□□ 0.2
TPM1-232ENST00000561425 FAM71E2Q8N5Q1 922 aa16.32■□□□□ 0.2
TPM1-232ENST00000561425 PTX4Q96A99 478 aa16.32■□□□□ 0.2
TPM1-232ENST00000561425 S1PR3Q99500 378 aa16.32■□□□□ 0.2
TPM1-232ENST00000561425 NABP2Q9BQ15 211 aa16.32■□□□□ 0.2
TPM1-232ENST00000561425 ZNF251Q9BRH9 671 aa16.32■□□□□ 0.2
TPM1-232ENST00000561425 AGMATQ9BSE5 352 aa16.32■□□□□ 0.2
TPM1-232ENST00000561425 TSSC4Q9Y5U2 329 aaPredicted RBP16.32■□□□□ 0.2
TPM1-232ENST00000561425 LINC01548A6NM66 108 aa16.31■□□□□ 0.2
TPM1-232ENST00000561425 RAB27BO00194 218 aa16.31■□□□□ 0.2
TPM1-232ENST00000561425 RAB6AP20340 208 aa16.31■□□□□ 0.2
TPM1-232ENST00000561425 MYL9P24844 172 aa16.31■□□□□ 0.2
TPM1-232ENST00000561425 F2RL1P55085 397 aa16.31■□□□□ 0.2
TPM1-232ENST00000561425 PDLIM3Q53GG5 364 aaPredicted RBP16.31■□□□□ 0.2
TPM1-232ENST00000561425 C22orf42Q6IC83 251 aa16.31■□□□□ 0.2
TPM1-232ENST00000561425 FAM71F2Q6NXP2 309 aa16.31■□□□□ 0.2
TPM1-232ENST00000561425 OR4X2Q8NGF9 303 aa16.31■□□□□ 0.2
TPM1-232ENST00000561425 CHPT1Q8WUD6 406 aa16.31■□□□□ 0.2
TPM1-232ENST00000561425 R3HDM4Q96D70 268 aa16.31■□□□□ 0.2
TPM1-232ENST00000561425 GHITMQ9H3K2 345 aa16.31■□□□□ 0.2
TPM1-232ENST00000561425 CHMP1AQ9HD42 196 aaPredicted RBP16.31■□□□□ 0.2
TPM1-232ENST00000561425 C12orf4Q9NQ89 552 aa16.31■□□□□ 0.2
TPM1-232ENST00000561425 TXNL4BQ9NX01 149 aaKnown RBP16.31■□□□□ 0.2
TPM1-232ENST00000561425 TCRBV4S1A1TA0A5B7 111 aa16.3■□□□□ 0.2
TPM1-232ENST00000561425 PSMB11A5LHX3 300 aa16.3■□□□□ 0.2
TPM1-232ENST00000561425 NCBP2LA6PVI3 153 aaKnown RBP16.3■□□□□ 0.2
TPM1-232ENST00000561425 MOGAT2Q3SYC2 334 aa16.3■□□□□ 0.2
TPM1-232ENST00000561425 SLC35E3Q7Z769 313 aa16.3■□□□□ 0.2
TPM1-232ENST00000561425 OR2AK2Q8NG84 335 aa16.3■□□□□ 0.2
TPM1-232ENST00000561425 RBMXL1Q96E39 390 aaKnown RBP16.3■□□□□ 0.2
TPM1-232ENST00000561425 TOLLIPQ9H0E2 274 aa16.3■□□□□ 0.2
TPM1-232ENST00000561425 SLC23A1Q9UHI7 598 aa16.3■□□□□ 0.2
TPM1-232ENST00000561425 STUB1Q9UNE7 303 aa16.3■□□□□ 0.2
TPM1-232ENST00000561425 SAA2-SAA4A0A096LPE2 208 aa16.29■□□□□ 0.2
TPM1-232ENST00000561425 TFAP2AP05549 437 aa16.29■□□□□ 0.2
TPM1-232ENST00000561425 SCTP09683 121 aa16.29■□□□□ 0.2
TPM1-232ENST00000561425 SAA2P0DJI9 122 aaPredicted RBP16.29■□□□□ 0.2
TPM1-232ENST00000561425 CD36P16671 472 aa16.29■□□□□ 0.2
TPM1-232ENST00000561425 RPL5P46777 297 aaKnown RBP16.29■□□□□ 0.2
TPM1-232ENST00000561425 GPR12P47775 334 aa16.29■□□□□ 0.2
TPM1-232ENST00000561425 OR3A3P47888 321 aa16.29■□□□□ 0.2
TPM1-232ENST00000561425 ALDH3B2P48448 385 aa16.29■□□□□ 0.2
TPM1-232ENST00000561425 HLA-DRB3P79483 266 aa16.29■□□□□ 0.2
TPM1-232ENST00000561425 BEAN1Q3B7T3 259 aa16.29■□□□□ 0.2
TPM1-232ENST00000561425 GPR141Q7Z602 305 aa16.29■□□□□ 0.2
TPM1-232ENST00000561425 STPG2Q8N412 459 aa16.29■□□□□ 0.2
TPM1-232ENST00000561425 IL1F10Q8WWZ1 152 aa16.29■□□□□ 0.2
TPM1-232ENST00000561425 NOL4LQ96MY1 436 aaPredicted RBP16.29■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms