RNA–Protein interactions for RNA: ENST00000561326.5

USP3-219, Transcript of ubiquitin specific peptidase 3, humanhuman

TSL 4

Gene USP3, Length 543 nt, Biotype processed transcript, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-219ENST00000561326 OR2AK2Q8NG84 335 aa8.51□□□□□ -1.05
USP3-219ENST00000561326 OR8U1Q8NH10 309 aa8.51□□□□□ -1.05
USP3-219ENST00000561326 CAPSLQ8WWF8 208 aa8.51□□□□□ -1.05
USP3-219ENST00000561326 RTN4IP1Q8WWV3 396 aaPredicted RBP8.51□□□□□ -1.05
USP3-219ENST00000561326 DMRTB1Q96MA1 342 aa8.51□□□□□ -1.05
USP3-219ENST00000561326 SSBP3Q9BWW4 388 aaPredicted RBP8.51□□□□□ -1.05
USP3-219ENST00000561326 GSX2Q9BZM3 304 aa8.51□□□□□ -1.05
USP3-219ENST00000561326 FXYD6Q9H0Q3 95 aa8.51□□□□□ -1.05
USP3-219ENST00000561326 CCL28Q9NRJ3 127 aa8.51□□□□□ -1.05
USP3-219ENST00000561326 SLC2A9Q9NRM0 540 aa8.51□□□□□ -1.05
USP3-219ENST00000561326 GFOD1Q9NXC2 390 aa8.51□□□□□ -1.05
USP3-219ENST00000561326 ZNF221Q9UK13 617 aa8.51□□□□□ -1.05
USP3-219ENST00000561326 CELSR2Q9HCU4 2923 aa8.51□□□□□ -1.05
USP3-219ENST00000561326 LOC105371242A0A075B767 164 aa8.5□□□□□ -1.05
USP3-219ENST00000561326 IGHV3-43A0A0B4J1X8 118 aa8.5□□□□□ -1.05
USP3-219ENST00000561326 A0A0B4J2A0 478 aa8.5□□□□□ -1.05
USP3-219ENST00000561326 PPIAL4CA0A0B4J2A2 164 aa8.5□□□□□ -1.05
USP3-219ENST00000561326 IGKV1D-13A0A0B4J2D9 117 aa8.5□□□□□ -1.05
USP3-219ENST00000561326 MEX3AA1L020 520 aaKnown RBP8.5□□□□□ -1.05
USP3-219ENST00000561326 CRYM-AS1A6NIL9 109 aa8.5□□□□□ -1.05
USP3-219ENST00000561326 RNF212BA8MTL3 300 aa8.5□□□□□ -1.05
USP3-219ENST00000561326 F5H0A9 414 aaPredicted RBP8.5□□□□□ -1.05
USP3-219ENST00000561326 HSD17B6O14756 317 aa8.5□□□□□ -1.05
USP3-219ENST00000561326 MPPED1O15442 326 aa8.5□□□□□ -1.05
USP3-219ENST00000561326 SFT2D2O95562 160 aa8.5□□□□□ -1.05
USP3-219ENST00000561326 LIPFP07098 398 aa8.5□□□□□ -1.05
USP3-219ENST00000561326 PPIAL4GP0DN37 164 aa8.5□□□□□ -1.05
USP3-219ENST00000561326 IGHV3-43DP0DP04 118 aa8.5□□□□□ -1.05
USP3-219ENST00000561326 IGKV1-13P0DP09 117 aa8.5□□□□□ -1.05
USP3-219ENST00000561326 DNASE1P24855 282 aa8.5□□□□□ -1.05
USP3-219ENST00000561326 CD34P28906 385 aa8.5□□□□□ -1.05
USP3-219ENST00000561326 LOXL3P58215 753 aa8.5□□□□□ -1.05
USP3-219ENST00000561326 PPP1R1AQ13522 171 aa8.5□□□□□ -1.05
USP3-219ENST00000561326 PHLDA2Q53GA4 152 aa8.5□□□□□ -1.05
USP3-219ENST00000561326 FGFRL1Q8N441 504 aa8.5□□□□□ -1.05
USP3-219ENST00000561326 BVESQ8NE79 360 aa8.5□□□□□ -1.05
USP3-219ENST00000561326 OR52B4Q8NGK2 314 aa8.5□□□□□ -1.05
USP3-219ENST00000561326 COQ8AQ8NI60 647 aa8.5□□□□□ -1.05
USP3-219ENST00000561326 C8orf46Q8TAG6 207 aa8.5□□□□□ -1.05
USP3-219ENST00000561326 CASTOR1Q8WTX7 329 aa8.5□□□□□ -1.05
USP3-219ENST00000561326 MITD1Q8WV92 249 aa8.5□□□□□ -1.05
USP3-219ENST00000561326 SUCNR1Q9BXA5 334 aa8.5□□□□□ -1.05
USP3-219ENST00000561326 BEX4Q9NWD9 120 aaPredicted RBP8.5□□□□□ -1.05
USP3-219ENST00000561326 SHPKQ9UHJ6 478 aa8.5□□□□□ -1.05
USP3-219ENST00000561326 RPUSD1Q9UJJ7 312 aaKnown RBP8.5□□□□□ -1.05
USP3-219ENST00000561326 KCNS2Q9ULS6 477 aa8.5□□□□□ -1.05
USP3-219ENST00000561326 FCN3O75636 299 aa8.49□□□□□ -1.05
USP3-219ENST00000561326 RBP4P02753 201 aa8.49□□□□□ -1.05
USP3-219ENST00000561326 OMGP23515 440 aa8.49□□□□□ -1.05
USP3-219ENST00000561326 SRPXP78539 464 aa8.49□□□□□ -1.05
USP3-219ENST00000561326 ZNF273Q14593 569 aa8.49□□□□□ -1.05
USP3-219ENST00000561326 GNMTQ14749 295 aa8.49□□□□□ -1.05
USP3-219ENST00000561326 Q3ZCU0 254 aa8.49□□□□□ -1.05
USP3-219ENST00000561326 ZNF818PQ6ZRF7 136 aa8.49□□□□□ -1.05
USP3-219ENST00000561326 ZNF645Q8N7E2 425 aa8.49□□□□□ -1.05
USP3-219ENST00000561326 C10orf105Q8TEF2 133 aa8.49□□□□□ -1.05
USP3-219ENST00000561326 TMEM230Q96A57 120 aa8.49□□□□□ -1.05
USP3-219ENST00000561326 GALNT14Q96FL9 552 aa8.49□□□□□ -1.05
USP3-219ENST00000561326 PERPQ96FX8 193 aa8.49□□□□□ -1.05
USP3-219ENST00000561326 NEURL2Q9BR09 285 aa8.49□□□□□ -1.05
USP3-219ENST00000561326 BPESC1Q9GZL8 116 aa8.49□□□□□ -1.05
USP3-219ENST00000561326 NARFLQ9H6Q4 476 aa8.49□□□□□ -1.05
USP3-219ENST00000561326 NAA60Q9H7X0 242 aa8.49□□□□□ -1.05
USP3-219ENST00000561326 MGAT4CQ9UBM8 478 aa8.49□□□□□ -1.05
USP3-219ENST00000561326 RNF150Q9ULK6 438 aa8.49□□□□□ -1.05
USP3-219ENST00000561326 PSG11Q9UQ72 335 aa8.49□□□□□ -1.05
USP3-219ENST00000561326 MED13LQ71F56 2210 aa8.48□□□□□ -1.05
USP3-219ENST00000561326 C3orf85A0A1B0GTC6 90 aa8.48□□□□□ -1.05
USP3-219ENST00000561326 C17orf98A8MV24 154 aa8.48□□□□□ -1.05
USP3-219ENST00000561326 TOR1AO14656 332 aa8.48□□□□□ -1.05
USP3-219ENST00000561326 PHF1O43189 567 aaPredicted RBP8.48□□□□□ -1.05
USP3-219ENST00000561326 FOXH1O75593 365 aa8.48□□□□□ -1.05
USP3-219ENST00000561326 PGLYRP1O75594 196 aaPredicted RBP8.48□□□□□ -1.05
USP3-219ENST00000561326 IGHV2-5P01817 119 aa8.48□□□□□ -1.05
USP3-219ENST00000561326 SULT1A3P0DMM9 295 aa8.48□□□□□ -1.05
USP3-219ENST00000561326 SULT1A4P0DMN0 295 aa8.48□□□□□ -1.05
USP3-219ENST00000561326 CCL3L1P16619 93 aa8.48□□□□□ -1.05
USP3-219ENST00000561326 GPR12P47775 334 aa8.48□□□□□ -1.05
USP3-219ENST00000561326 FCN2Q15485 313 aa8.48□□□□□ -1.05
USP3-219ENST00000561326 SLC9A3R2Q15599 337 aa8.48□□□□□ -1.05
USP3-219ENST00000561326 PRAMEF5Q5TYX0 476 aa8.48□□□□□ -1.05
USP3-219ENST00000561326 C1orf122Q6ZSJ8 110 aa8.48□□□□□ -1.05
USP3-219ENST00000561326 TCF23Q7RTU1 214 aa8.48□□□□□ -1.05
USP3-219ENST00000561326 TBC1D26Q86UD7 250 aa8.48□□□□□ -1.05
USP3-219ENST00000561326 LDLRAD3Q86YD5 345 aa8.48□□□□□ -1.05
USP3-219ENST00000561326 TCTEX1D1Q8N7M0 179 aa8.48□□□□□ -1.05
USP3-219ENST00000561326 ZNF436-AS1Q8NC38 126 aaPredicted RBP8.48□□□□□ -1.05
USP3-219ENST00000561326 LY6G5BQ8NDX9 201 aa8.48□□□□□ -1.05
USP3-219ENST00000561326 CLDND2Q8NHS1 167 aa8.48□□□□□ -1.05
USP3-219ENST00000561326 OR2D2Q9H210 308 aa8.48□□□□□ -1.05
USP3-219ENST00000561326 METTL8Q9H825 291 aaKnown RBP8.48□□□□□ -1.05
USP3-219ENST00000561326 GAB2Q9UQC2 676 aa8.48□□□□□ -1.05
USP3-219ENST00000561326 RAB29O14966 203 aa8.47□□□□□ -1.05
USP3-219ENST00000561326 ENSAO43768 121 aaKnown RBP8.47□□□□□ -1.05
USP3-219ENST00000561326 IFNA21P01568 189 aa8.47□□□□□ -1.05
USP3-219ENST00000561326 SERPINE2P07093 398 aa8.47□□□□□ -1.05
USP3-219ENST00000561326 HNRNPCP07910 306 aaKnown RBP eCLIP8.47□□□□□ -1.059e-7■■■□□ 16.3
USP3-219ENST00000561326 IGHV1-8P0DP01 117 aa8.47□□□□□ -1.05
USP3-219ENST00000561326 SLC25A16P16260 332 aa8.47□□□□□ -1.05
USP3-219ENST00000561326 HLA-GP17693 338 aa8.47□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 53.8 ms