RNA–Protein interactions for RNA: ENST00000561271.1

CDC42BPB-208, Transcript of CDC42 binding protein kinase beta, human

TSL 3

Gene CDC42BPB, Length 572 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CDC42BPB-208	ENST00000561271	PSMA1	P25786	263 aa	Known RBP	13.55	□□□□□ -0.24
CDC42BPB-208	ENST00000561271	CALR	P27797	417 aa	Known RBP	13.55	□□□□□ -0.24
CDC42BPB-208	ENST00000561271	CLDN12	P56749	244 aa		13.55	□□□□□ -0.24
CDC42BPB-208	ENST00000561271	SLC35B1	P78383	322 aa		13.55	□□□□□ -0.24
CDC42BPB-208	ENST00000561271	HTD2	P86397	168 aa		13.55	□□□□□ -0.24
CDC42BPB-208	ENST00000561271	FABP5	Q01469	135 aa		13.55	□□□□□ -0.24
CDC42BPB-208	ENST00000561271	TRAM1	Q15629	374 aa		13.55	□□□□□ -0.24
CDC42BPB-208	ENST00000561271	FOXB2	Q5VYV0	432 aa		13.55	□□□□□ -0.24
CDC42BPB-208	ENST00000561271	STEAP3	Q658P3	488 aa		13.55	□□□□□ -0.24
CDC42BPB-208	ENST00000561271	OR2W3	Q7Z3T1	314 aa		13.55	□□□□□ -0.24
CDC42BPB-208	ENST00000561271	FAM71E2	Q8N5Q1	922 aa		13.55	□□□□□ -0.24
CDC42BPB-208	ENST00000561271	WFDC9	Q8NEX5	89 aa		13.55	□□□□□ -0.24
CDC42BPB-208	ENST00000561271	GALM	Q96C23	342 aa		13.55	□□□□□ -0.24
CDC42BPB-208	ENST00000561271	MGLL	Q99685	303 aa		13.55	□□□□□ -0.24
CDC42BPB-208	ENST00000561271	HSPB9	Q9BQS6	159 aa		13.55	□□□□□ -0.24
CDC42BPB-208	ENST00000561271	HDHD3	Q9BSH5	251 aa	Predicted RBP	13.55	□□□□□ -0.24
CDC42BPB-208	ENST00000561271	AURKAIP1	Q9NWT8	199 aa	Predicted RBP	13.55	□□□□□ -0.24
CDC42BPB-208	ENST00000561271	SAA2-SAA4	A0A096LPE2	208 aa		13.54	□□□□□ -0.24
CDC42BPB-208	ENST00000561271	NUDT19	A8MXV4	375 aa		13.54	□□□□□ -0.24
CDC42BPB-208	ENST00000561271	AP4M1	O00189	453 aa		13.54	□□□□□ -0.24
CDC42BPB-208	ENST00000561271	SOCS1	O15524	211 aa		13.54	□□□□□ -0.24
CDC42BPB-208	ENST00000561271	YPEL1	O60688	119 aa		13.54	□□□□□ -0.24
CDC42BPB-208	ENST00000561271	SAA2	P0DJI9	122 aa	Predicted RBP	13.54	□□□□□ -0.24
CDC42BPB-208	ENST00000561271	SLC2A2	P11168	524 aa	Predicted RBP	13.54	□□□□□ -0.24
CDC42BPB-208	ENST00000561271	ARSB	P15848	533 aa		13.54	□□□□□ -0.24
CDC42BPB-208	ENST00000561271	OR3A3	P47888	321 aa		13.54	□□□□□ -0.24
CDC42BPB-208	ENST00000561271	HSPA13	P48723	471 aa		13.54	□□□□□ -0.24
CDC42BPB-208	ENST00000561271	F2RL1	P55085	397 aa		13.54	□□□□□ -0.24
CDC42BPB-208	ENST00000561271	TBCE	Q15813	527 aa	Predicted RBP	13.54	□□□□□ -0.24
CDC42BPB-208	ENST00000561271	RAB11B	Q15907	218 aa		13.54	□□□□□ -0.24
CDC42BPB-208	ENST00000561271	C8orf86	Q6ZUL3	223 aa		13.54	□□□□□ -0.24
CDC42BPB-208	ENST00000561271	REC114	Q7Z4M0	266 aa		13.54	□□□□□ -0.24
CDC42BPB-208	ENST00000561271	KLHL30-AS1	Q8NEE0	82 aa		13.54	□□□□□ -0.24
CDC42BPB-208	ENST00000561271	OR2AK2	Q8NG84	335 aa		13.54	□□□□□ -0.24
CDC42BPB-208	ENST00000561271	YPEL2	Q96QA6	119 aa		13.54	□□□□□ -0.24
CDC42BPB-208	ENST00000561271	RASL11B	Q9BPW5	248 aa		13.54	□□□□□ -0.24
CDC42BPB-208	ENST00000561271	IFI27L2	Q9H2X8	130 aa		13.54	□□□□□ -0.24
CDC42BPB-208	ENST00000561271	PLEKHJ1	Q9NW61	149 aa		13.54	□□□□□ -0.24
CDC42BPB-208	ENST00000561271	ABRACL	Q9P1F3	81 aa		13.54	□□□□□ -0.24
CDC42BPB-208	ENST00000561271	AK3	Q9UIJ7	227 aa		13.54	□□□□□ -0.24
CDC42BPB-208	ENST00000561271	ST8SIA5	O15466	376 aa		13.53	□□□□□ -0.24
CDC42BPB-208	ENST00000561271	RGS11	O94810	467 aa		13.53	□□□□□ -0.24
CDC42BPB-208	ENST00000561271	MMD	Q15546	238 aa		13.53	□□□□□ -0.24
CDC42BPB-208	ENST00000561271	ZNF880	Q6PDB4	577 aa		13.53	□□□□□ -0.24
CDC42BPB-208	ENST00000561271	LCNL1	Q6ZST4	164 aa		13.53	□□□□□ -0.24
CDC42BPB-208	ENST00000561271	ZNF833P	Q6ZTB9	187 aa		13.53	□□□□□ -0.24
CDC42BPB-208	ENST00000561271	MOB1B	Q7L9L4	216 aa		13.53	□□□□□ -0.24
CDC42BPB-208	ENST00000561271	LINC00482	Q8N8I6	264 aa		13.53	□□□□□ -0.24
CDC42BPB-208	ENST00000561271	OR51D1	Q8NGF3	324 aa		13.53	□□□□□ -0.24
CDC42BPB-208	ENST00000561271	OR8H1	Q8NGG4	311 aa		13.53	□□□□□ -0.24
CDC42BPB-208	ENST00000561271	MRAP	Q8TCY5	172 aa		13.53	□□□□□ -0.24
CDC42BPB-208	ENST00000561271	NABP2	Q9BQ15	211 aa		13.53	□□□□□ -0.24
CDC42BPB-208	ENST00000561271	URM1	Q9BTM9	101 aa	Known RBP	13.53	□□□□□ -0.24
CDC42BPB-208	ENST00000561271	PARP12	Q9H0J9	701 aa	Known RBP	13.53	□□□□□ -0.24
CDC42BPB-208	ENST00000561271	FOXI3	A8MTJ6	420 aa	Predicted RBP	13.52	□□□□□ -0.25
CDC42BPB-208	ENST00000561271	CNTFR	P26992	372 aa		13.52	□□□□□ -0.25
CDC42BPB-208	ENST00000561271	SOX6	P35712	828 aa		13.52	□□□□□ -0.25
CDC42BPB-208	ENST00000561271	SSX1	Q16384	188 aa		13.52	□□□□□ -0.25
CDC42BPB-208	ENST00000561271	HES5	Q5TA89	166 aa		13.52	□□□□□ -0.25
CDC42BPB-208	ENST00000561271	ZNF367	Q7RTV3	350 aa		13.52	□□□□□ -0.25
CDC42BPB-208	ENST00000561271	MRPL41	Q8IXM3	137 aa	Known RBP	13.52	□□□□□ -0.25
CDC42BPB-208	ENST00000561271	COMMD1	Q8N668	190 aa		13.52	□□□□□ -0.25
CDC42BPB-208	ENST00000561271	RCC1L	Q96I51	464 aa	Known RBP	13.52	□□□□□ -0.25
CDC42BPB-208	ENST00000561271	STEAP1	Q9UHE8	339 aa		13.52	□□□□□ -0.25
CDC42BPB-208	ENST00000561271	BLOC1S6	Q9UL45	172 aa		13.52	□□□□□ -0.25
CDC42BPB-208	ENST00000561271	RPLP1	P05386	114 aa	Known RBP	13.51	□□□□□ -0.25
CDC42BPB-208	ENST00000561271	THBS3	P49746	956 aa		13.51	□□□□□ -0.25
CDC42BPB-208	ENST00000561271	VEGFC	P49767	419 aa		13.51	□□□□□ -0.25
CDC42BPB-208	ENST00000561271	ACTB	P60709	375 aa		13.51	□□□□□ -0.25
CDC42BPB-208	ENST00000561271	HLA-DRB3	P79483	266 aa		13.51	□□□□□ -0.25
CDC42BPB-208	ENST00000561271	PLA2G7	Q13093	441 aa		13.51	□□□□□ -0.25
CDC42BPB-208	ENST00000561271	LY6G6F	Q5SQ64	297 aa		13.51	□□□□□ -0.25
CDC42BPB-208	ENST00000561271	FAM89B	Q8N5H3	189 aa		13.51	□□□□□ -0.25
CDC42BPB-208	ENST00000561271	FAM3D	Q96BQ1	224 aa		13.51	□□□□□ -0.25
CDC42BPB-208	ENST00000561271	ARHGAP5-AS1	Q96IT6	56 aa		13.51	□□□□□ -0.25
CDC42BPB-208	ENST00000561271	DUX3	Q96PT4	197 aa		13.51	□□□□□ -0.25
CDC42BPB-208	ENST00000561271	ZNF107	Q9UII5	783 aa	Predicted RBP	13.51	□□□□□ -0.25
CDC42BPB-208	ENST00000561271	LRRC42	Q9Y546	428 aa		13.51	□□□□□ -0.25
CDC42BPB-208	ENST00000561271	RRP9	O43818	475 aa	Known RBP	13.5	□□□□□ -0.25
CDC42BPB-208	ENST00000561271	OR10A3	P58181	314 aa		13.5	□□□□□ -0.25
CDC42BPB-208	ENST00000561271	RPL39P5	Q59GN2	51 aa		13.5	□□□□□ -0.25
CDC42BPB-208	ENST00000561271	TEX38	Q6PEX7	206 aa		13.5	□□□□□ -0.25
CDC42BPB-208	ENST00000561271	FAM131A	Q6UXB0	335 aa		13.5	□□□□□ -0.25
CDC42BPB-208	ENST00000561271	ZNF695	Q8IW36	515 aa		13.5	□□□□□ -0.25
CDC42BPB-208	ENST00000561271	RITA1	Q96K30	269 aa		13.5	□□□□□ -0.25
CDC42BPB-208	ENST00000561271	PECR	Q9BY49	303 aa		13.5	□□□□□ -0.25
CDC42BPB-208	ENST00000561271	ACOT13	Q9NPJ3	140 aa		13.5	□□□□□ -0.25
CDC42BPB-208	ENST00000561271	C12orf4	Q9NQ89	552 aa		13.5	□□□□□ -0.25
CDC42BPB-208	ENST00000561271	ZFP57	Q9NU63	452 aa		13.5	□□□□□ -0.25
CDC42BPB-208	ENST00000561271	OR1A1	Q9P1Q5	309 aa		13.5	□□□□□ -0.25
CDC42BPB-208	ENST00000561271	SLC23A1	Q9UHI7	598 aa		13.5	□□□□□ -0.25
CDC42BPB-208	ENST00000561271	RAB26	Q9ULW5	256 aa		13.5	□□□□□ -0.25
CDC42BPB-208	ENST00000561271		V9GY05	133 aa		13.5	□□□□□ -0.25
CDC42BPB-208	ENST00000561271	TRBV6-6	A0A0A6YYG2	114 aa		13.49	□□□□□ -0.25
CDC42BPB-208	ENST00000561271	TMEM272	A0A1B0GTI8	110 aa		13.49	□□□□□ -0.25
CDC42BPB-208	ENST00000561271	SHISA3	A0PJX4	238 aa		13.49	□□□□□ -0.25
CDC42BPB-208	ENST00000561271	ATP6V1G2	O95670	118 aa		13.49	□□□□□ -0.25
CDC42BPB-208	ENST00000561271	VDAC1	P21796	283 aa		13.49	□□□□□ -0.25
CDC42BPB-208	ENST00000561271	HOXD3	P31249	432 aa	Predicted RBP	13.49	□□□□□ -0.25
CDC42BPB-208	ENST00000561271	TMEM50B	P56557	158 aa		13.49	□□□□□ -0.25

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