RNA–Protein interactions for RNA: ENST00000561266.5

TPM1-230, Transcript of tropomyosin 1, humanhuman

TSL 3

Gene TPM1, Length 671 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-230ENST00000561266 SERTAD4Q9NUC0 356 aa11.09□□□□□ -0.63
TPM1-230ENST00000561266 CMYA5Q8N3K9 4069 aa11.09□□□□□ -0.63
TPM1-230ENST00000561266 WNK1Q9H4A3 2382 aa11.08□□□□□ -0.64
TPM1-230ENST00000561266 ST8SIA5O15466 376 aa11.08□□□□□ -0.64
TPM1-230ENST00000561266 SSX5O60225 188 aa11.08□□□□□ -0.64
TPM1-230ENST00000561266 PROP1O75360 226 aa11.08□□□□□ -0.64
TPM1-230ENST00000561266 GSTT2P0CG29 244 aa11.08□□□□□ -0.64
TPM1-230ENST00000561266 GSTT2BP0CG30 244 aa11.08□□□□□ -0.64
TPM1-230ENST00000561266 PTHLHP12272 177 aa11.08□□□□□ -0.64
TPM1-230ENST00000561266 BRS3P32247 399 aa11.08□□□□□ -0.64
TPM1-230ENST00000561266 HNF4GQ14541 408 aa11.08□□□□□ -0.64
TPM1-230ENST00000561266 ZNF260Q3ZCT1 412 aa11.08□□□□□ -0.64
TPM1-230ENST00000561266 LIAT1Q6ZQX7 453 aa11.08□□□□□ -0.64
TPM1-230ENST00000561266 MOB3BQ86TA1 216 aa11.08□□□□□ -0.64
TPM1-230ENST00000561266 LYG1Q8N1E2 194 aa11.08□□□□□ -0.64
TPM1-230ENST00000561266 DTX3Q8N9I9 347 aa11.08□□□□□ -0.64
TPM1-230ENST00000561266 RBM14Q96PK6 669 aaKnown RBP11.08□□□□□ -0.64
TPM1-230ENST00000561266 CITED1Q99966 193 aa11.08□□□□□ -0.64
TPM1-230ENST00000561266 SLC25A33Q9BSK2 321 aa11.08□□□□□ -0.64
TPM1-230ENST00000561266 ABHD14AQ9BUJ0 271 aa11.08□□□□□ -0.64
TPM1-230ENST00000561266 IFI27L2Q9H2X8 130 aa11.08□□□□□ -0.64
TPM1-230ENST00000561266 RIMS4Q9H426 269 aaPredicted RBP11.08□□□□□ -0.64
TPM1-230ENST00000561266 RHBDL2Q9NX52 303 aa11.08□□□□□ -0.64
TPM1-230ENST00000561266 A0A1B0GUS0 222 aa11.07□□□□□ -0.64
TPM1-230ENST00000561266 METTL21EPA6NDL7 271 aa11.07□□□□□ -0.64
TPM1-230ENST00000561266 TRDCB7Z8K6 153 aa11.07□□□□□ -0.64
TPM1-230ENST00000561266 OR2F2O95006 317 aa11.07□□□□□ -0.64
TPM1-230ENST00000561266 IGKV1D-33P01593 117 aa11.07□□□□□ -0.64
TPM1-230ENST00000561266 IGKV1-33P01594 117 aa11.07□□□□□ -0.64
TPM1-230ENST00000561266 GAPDHP04406 335 aaKnown RBP11.07□□□□□ -0.64
TPM1-230ENST00000561266 RAB7AP51149 207 aa11.07□□□□□ -0.64
TPM1-230ENST00000561266 EBI3Q14213 229 aa11.07□□□□□ -0.64
TPM1-230ENST00000561266 CTF1Q16619 201 aa11.07□□□□□ -0.64
TPM1-230ENST00000561266 TMEM30BQ3MIR4 351 aa11.07□□□□□ -0.64
TPM1-230ENST00000561266 TIMM50Q3ZCQ8 353 aa11.07□□□□□ -0.64
TPM1-230ENST00000561266 IGSF11Q5DX21 431 aa11.07□□□□□ -0.64
TPM1-230ENST00000561266 LY6G6FQ5SQ64 297 aa11.07□□□□□ -0.64
TPM1-230ENST00000561266 CCDC144NLQ6NUI1 221 aa11.07□□□□□ -0.64
TPM1-230ENST00000561266 MOB1BQ7L9L4 216 aa11.07□□□□□ -0.64
TPM1-230ENST00000561266 THNSL2Q86YJ6 484 aa11.07□□□□□ -0.64
TPM1-230ENST00000561266 OR8H3Q8N146 312 aa11.07□□□□□ -0.64
TPM1-230ENST00000561266 Q8N6K4 173 aa11.07□□□□□ -0.64
TPM1-230ENST00000561266 OR4C13Q8NGP0 309 aa11.07□□□□□ -0.64
TPM1-230ENST00000561266 NUDCD2Q8WVJ2 157 aa11.07□□□□□ -0.64
TPM1-230ENST00000561266 RITA1Q96K30 269 aa11.07□□□□□ -0.64
TPM1-230ENST00000561266 ZNF251Q9BRH9 671 aa11.07□□□□□ -0.64
TPM1-230ENST00000561266 AGMATQ9BSE5 352 aa11.07□□□□□ -0.64
TPM1-230ENST00000561266 MRPS26Q9BYN8 205 aaKnown RBP11.07□□□□□ -0.64
TPM1-230ENST00000561266 NPFFR1Q9GZQ6 430 aa11.07□□□□□ -0.64
TPM1-230ENST00000561266 C11orf54Q9H0W9 315 aaPredicted RBP11.07□□□□□ -0.64
TPM1-230ENST00000561266 RANBP3Q9H6Z4 567 aaPredicted RBP11.07□□□□□ -0.64
TPM1-230ENST00000561266 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP11.07□□□□□ -0.64
TPM1-230ENST00000561266 SLC23A1Q9UHI7 598 aa11.07□□□□□ -0.64
TPM1-230ENST00000561266 PITPNC1Q9UKF7 332 aa11.07□□□□□ -0.64
TPM1-230ENST00000561266 SAA2-SAA4A0A096LPE2 208 aa11.06□□□□□ -0.64
TPM1-230ENST00000561266 TMEM235A6NFC5 223 aa11.06□□□□□ -0.64
TPM1-230ENST00000561266 SAA2P0DJI9 122 aaPredicted RBP11.06□□□□□ -0.64
TPM1-230ENST00000561266 MNDAP41218 407 aa11.06□□□□□ -0.64
TPM1-230ENST00000561266 SERPINB10P48595 397 aa11.06□□□□□ -0.64
TPM1-230ENST00000561266 LINC00205P59089 165 aa11.06□□□□□ -0.64
TPM1-230ENST00000561266 RPL39P5Q59GN2 51 aa11.06□□□□□ -0.64
TPM1-230ENST00000561266 GPR107Q5VW38 600 aa11.06□□□□□ -0.64
TPM1-230ENST00000561266 STEAP3Q658P3 488 aa11.06□□□□□ -0.64
TPM1-230ENST00000561266 SHISA2Q6UWI4 295 aa11.06□□□□□ -0.64
TPM1-230ENST00000561266 ANKRD13BQ86YJ7 626 aa11.06□□□□□ -0.64
TPM1-230ENST00000561266 WIPF2Q8TF74 440 aaPredicted RBP11.06□□□□□ -0.64
TPM1-230ENST00000561266 ABHD14BQ96IU4 210 aa11.06□□□□□ -0.64
TPM1-230ENST00000561266 EAF1Q96JC9 268 aaPredicted RBP11.06□□□□□ -0.64
TPM1-230ENST00000561266 MRPL20Q9BYC9 149 aaKnown RBP11.06□□□□□ -0.64
TPM1-230ENST00000561266 RAB18Q9NP72 206 aa11.06□□□□□ -0.64
TPM1-230ENST00000561266 RAB9BQ9NP90 201 aa11.06□□□□□ -0.64
TPM1-230ENST00000561266 PLSCR3Q9NRY6 295 aa11.06□□□□□ -0.64
TPM1-230ENST00000561266 ABRACLQ9P1F3 81 aa11.06□□□□□ -0.64
TPM1-230ENST00000561266 RNF150Q9ULK6 438 aa11.06□□□□□ -0.64
TPM1-230ENST00000561266 SPATA2Q9UM82 520 aa11.06□□□□□ -0.64
TPM1-230ENST00000561266 PLXNB1O43157 2135 aa11.06□□□□□ -0.64
TPM1-230ENST00000561266 PKD1L1Q8TDX9 2849 aa11.06□□□□□ -0.64
TPM1-230ENST00000561266 SERPINE3A8MV23 424 aa11.05□□□□□ -0.64
TPM1-230ENST00000561266 FABP7O15540 132 aa11.05□□□□□ -0.64
TPM1-230ENST00000561266 LANCL1O43813 399 aa11.05□□□□□ -0.64
TPM1-230ENST00000561266 CEACAM6P40199 344 aa11.05□□□□□ -0.64
TPM1-230ENST00000561266 RANBP1P43487 201 aa11.05□□□□□ -0.64
TPM1-230ENST00000561266 ARFRP1Q13795 201 aa11.05□□□□□ -0.64
TPM1-230ENST00000561266 ABCA11PQ4W5N1 156 aa11.05□□□□□ -0.64
TPM1-230ENST00000561266 HACD4Q5VWC8 232 aa11.05□□□□□ -0.64
TPM1-230ENST00000561266 ZNF833PQ6ZTB9 187 aa11.05□□□□□ -0.64
TPM1-230ENST00000561266 KLHDC1Q8N7A1 406 aa11.05□□□□□ -0.64
TPM1-230ENST00000561266 C11orf44Q8N8P7 122 aa11.05□□□□□ -0.64
TPM1-230ENST00000561266 SLC25A46Q96AG3 418 aa11.05□□□□□ -0.64
TPM1-230ENST00000561266 C5orf30Q96GV9 206 aa11.05□□□□□ -0.64
TPM1-230ENST00000561266 NABP2Q9BQ15 211 aa11.05□□□□□ -0.64
TPM1-230ENST00000561266 PRSS22Q9GZN4 317 aa11.05□□□□□ -0.64
TPM1-230ENST00000561266 VWFP04275 2813 aa11.05□□□□□ -0.64
TPM1-230ENST00000561266 TRAV18A0A075B6X5 111 aa11.04□□□□□ -0.64
TPM1-230ENST00000561266 LINC01548A6NM66 108 aa11.04□□□□□ -0.64
TPM1-230ENST00000561266 GABARAPO95166 117 aa11.04□□□□□ -0.64
TPM1-230ENST00000561266 FAM106CPP0CH98 169 aa11.04□□□□□ -0.64
TPM1-230ENST00000561266 VSIG10L2P0DP72 767 aa11.04□□□□□ -0.64
TPM1-230ENST00000561266 TMEM11P17152 192 aa11.04□□□□□ -0.64
TPM1-230ENST00000561266 F2RL1P55085 397 aa11.04□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 74.2 ms