RNA–Protein interactions for RNA: ENST00000560861.1

SNX1-212, Transcript of sorting nexin 1, humanhuman

TSL 3

Gene SNX1, Length 850 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-212ENST00000560861 GFOD1Q9NXC2 390 aa9.3□□□□□ -0.92
SNX1-212ENST00000560861 C14orf166Q9Y224 244 aaKnown RBP9.3□□□□□ -0.92
SNX1-212ENST00000560861 TACC2O95359 2948 aa9.3□□□□□ -0.92
SNX1-212ENST00000560861 ARHGAP32A7KAX9 2087 aa9.3□□□□□ -0.92
SNX1-212ENST00000560861 TEX15Q9BXT5 2789 aa9.29□□□□□ -0.92
SNX1-212ENST00000560861 IGHV3-43A0A0B4J1X8 118 aa9.29□□□□□ -0.92
SNX1-212ENST00000560861 VWC2LB2RUY7 222 aa9.29□□□□□ -0.92
SNX1-212ENST00000560861 GPR31O00270 319 aa9.29□□□□□ -0.92
SNX1-212ENST00000560861 GPR37O15354 613 aa9.29□□□□□ -0.92
SNX1-212ENST00000560861 HLA-AP01891 365 aaKnown RBP9.29□□□□□ -0.92
SNX1-212ENST00000560861 IGHV3-43DP0DP04 118 aa9.29□□□□□ -0.92
SNX1-212ENST00000560861 HLA-GP17693 338 aa9.29□□□□□ -0.92
SNX1-212ENST00000560861 LUMP51884 338 aaPredicted RBP9.29□□□□□ -0.92
SNX1-212ENST00000560861 PIGPP57054 158 aa9.29□□□□□ -0.92
SNX1-212ENST00000560861 KRTAP10-9P60411 292 aa9.29□□□□□ -0.92
SNX1-212ENST00000560861 RPL31P62899 125 aaKnown RBP9.29□□□□□ -0.92
SNX1-212ENST00000560861 ANKRD55Q3KP44 614 aa9.29□□□□□ -0.92
SNX1-212ENST00000560861 MORN2Q502X0 79 aa9.29□□□□□ -0.92
SNX1-212ENST00000560861 FAM185AQ8N0U4 392 aa9.29□□□□□ -0.92
SNX1-212ENST00000560861 LY6G5BQ8NDX9 201 aa9.29□□□□□ -0.92
SNX1-212ENST00000560861 OR2AK2Q8NG84 335 aa9.29□□□□□ -0.92
SNX1-212ENST00000560861 OR8B3Q8NGG8 313 aa9.29□□□□□ -0.92
SNX1-212ENST00000560861 SECTM1Q8WVN6 248 aa9.29□□□□□ -0.92
SNX1-212ENST00000560861 NRGNQ92686 78 aa9.29□□□□□ -0.92
SNX1-212ENST00000560861 OR8B2Q96RD0 313 aa9.29□□□□□ -0.92
SNX1-212ENST00000560861 NAA60Q9H7X0 242 aa9.29□□□□□ -0.92
SNX1-212ENST00000560861 RAB9BQ9NP90 201 aa9.29□□□□□ -0.92
SNX1-212ENST00000560861 OR2S2Q9NQN1 319 aa9.29□□□□□ -0.92
SNX1-212ENST00000560861 IDI2-AS1Q9NZ38 188 aa9.29□□□□□ -0.92
SNX1-212ENST00000560861 RPUSD1Q9UJJ7 312 aaKnown RBP9.29□□□□□ -0.92
SNX1-212ENST00000560861 C17orf98A8MV24 154 aa9.28□□□□□ -0.92
SNX1-212ENST00000560861 A8MV72 311 aaPredicted RBP9.28□□□□□ -0.92
SNX1-212ENST00000560861 KIAA1324LA8MWY0 1029 aaPredicted RBP9.28□□□□□ -0.92
SNX1-212ENST00000560861 C22orf46C9J442 243 aa9.28□□□□□ -0.92
SNX1-212ENST00000560861 HSPA12AO43301 675 aa9.28□□□□□ -0.92
SNX1-212ENST00000560861 SSNA1O43805 119 aa9.28□□□□□ -0.92
SNX1-212ENST00000560861 CCNKO75909 580 aa9.28□□□□□ -0.92
SNX1-212ENST00000560861 OR8U9P0C7N5 309 aa9.28□□□□□ -0.92
SNX1-212ENST00000560861 CCL3L1P16619 93 aa9.28□□□□□ -0.92
SNX1-212ENST00000560861 OMGP23515 440 aa9.28□□□□□ -0.92
SNX1-212ENST00000560861 SRSF4Q08170 494 aaKnown RBP9.28□□□□□ -0.92
SNX1-212ENST00000560861 TMEM187Q14656 261 aa9.28□□□□□ -0.92
SNX1-212ENST00000560861 C11orf91Q3C1V1 193 aa9.28□□□□□ -0.92
SNX1-212ENST00000560861 PHLDA2Q53GA4 152 aa9.28□□□□□ -0.92
SNX1-212ENST00000560861 HEPN1Q6WQI6 88 aa9.28□□□□□ -0.92
SNX1-212ENST00000560861 TCTE3Q8IZS6 198 aa9.28□□□□□ -0.92
SNX1-212ENST00000560861 OR8U1Q8NH10 309 aa9.28□□□□□ -0.92
SNX1-212ENST00000560861 RTN4IP1Q8WWV3 396 aaPredicted RBP9.28□□□□□ -0.92
SNX1-212ENST00000560861 DACT3Q96B18 629 aaPredicted RBP9.28□□□□□ -0.92
SNX1-212ENST00000560861 AKR1E2Q96JD6 320 aa9.28□□□□□ -0.92
SNX1-212ENST00000560861 GSX2Q9BZM3 304 aa9.28□□□□□ -0.92
SNX1-212ENST00000560861 PIPOXQ9P0Z9 390 aa9.28□□□□□ -0.92
SNX1-212ENST00000560861 A0A087X0M5 115 aa9.27□□□□□ -0.93
SNX1-212ENST00000560861 A0A1B0GX30 115 aa9.27□□□□□ -0.93
SNX1-212ENST00000560861 HSD17B6O14756 317 aa9.27□□□□□ -0.93
SNX1-212ENST00000560861 SLC31A2O15432 143 aa9.27□□□□□ -0.93
SNX1-212ENST00000560861 MPPED1O15442 326 aa9.27□□□□□ -0.93
SNX1-212ENST00000560861 PROP1O75360 226 aa9.27□□□□□ -0.93
SNX1-212ENST00000560861 PGLYRP1O75594 196 aaPredicted RBP9.27□□□□□ -0.93
SNX1-212ENST00000560861 OR2A4O95047 310 aa9.27□□□□□ -0.93
SNX1-212ENST00000560861 IGHV2-5P01817 119 aa9.27□□□□□ -0.93
SNX1-212ENST00000560861 VAMP1P23763 118 aa9.27□□□□□ -0.93
SNX1-212ENST00000560861 CD34P28906 385 aa9.27□□□□□ -0.93
SNX1-212ENST00000560861 SSTR2P30874 369 aa9.27□□□□□ -0.93
SNX1-212ENST00000560861 PDLIM4P50479 330 aa9.27□□□□□ -0.93
SNX1-212ENST00000560861 ZNF134P52741 427 aa9.27□□□□□ -0.93
SNX1-212ENST00000560861 LMO4P61968 165 aa9.27□□□□□ -0.93
SNX1-212ENST00000560861 SLC9A3R2Q15599 337 aa9.27□□□□□ -0.93
SNX1-212ENST00000560861 Q3ZCU0 254 aa9.27□□□□□ -0.93
SNX1-212ENST00000560861 ABCA11PQ4W5N1 156 aa9.27□□□□□ -0.93
SNX1-212ENST00000560861 PRAMEF5Q5TYX0 476 aa9.27□□□□□ -0.93
SNX1-212ENST00000560861 KCTD9Q7L273 389 aa9.27□□□□□ -0.93
SNX1-212ENST00000560861 NLRC3Q7RTR2 1065 aa9.27□□□□□ -0.93
SNX1-212ENST00000560861 TBC1D26Q86UD7 250 aa9.27□□□□□ -0.93
SNX1-212ENST00000560861 SGPP2Q8IWX5 399 aa9.27□□□□□ -0.93
SNX1-212ENST00000560861 DRAM1Q8N682 238 aa9.27□□□□□ -0.93
SNX1-212ENST00000560861 LRTM2Q8N967 370 aa9.27□□□□□ -0.93
SNX1-212ENST00000560861 CCDC71LQ8N9Z2 235 aa9.27□□□□□ -0.93
SNX1-212ENST00000560861 ZBTB34Q8NCN2 500 aa9.27□□□□□ -0.93
SNX1-212ENST00000560861 ZNF596Q8TC21 504 aa9.27□□□□□ -0.93
SNX1-212ENST00000560861 C10orf105Q8TEF2 133 aa9.27□□□□□ -0.93
SNX1-212ENST00000560861 EDARADDQ8WWZ3 215 aa9.27□□□□□ -0.93
SNX1-212ENST00000560861 H1FXQ92522 213 aaKnown RBP9.27□□□□□ -0.93
SNX1-212ENST00000560861 ZNF714Q96N38 554 aa9.27□□□□□ -0.93
SNX1-212ENST00000560861 FYTTD1Q96QD9 318 aaKnown RBP9.27□□□□□ -0.93
SNX1-212ENST00000560861 OR2A7Q96R45 310 aa9.27□□□□□ -0.93
SNX1-212ENST00000560861 IFI27L2Q9H2X8 130 aa9.27□□□□□ -0.93
SNX1-212ENST00000560861 GAL3ST2Q9H3Q3 398 aa9.27□□□□□ -0.93
SNX1-212ENST00000560861 BARX1Q9HBU1 254 aaPredicted RBP9.27□□□□□ -0.93
SNX1-212ENST00000560861 RANGRFQ9HD47 186 aaPredicted RBP9.27□□□□□ -0.93
SNX1-212ENST00000560861 PRR13Q9NZ81 148 aa9.27□□□□□ -0.93
SNX1-212ENST00000560861 GNG12Q9UBI6 72 aa9.27□□□□□ -0.93
SNX1-212ENST00000560861 MGAT4CQ9UBM8 478 aa9.27□□□□□ -0.93
SNX1-212ENST00000560861 GAB2Q9UQC2 676 aa9.27□□□□□ -0.93
SNX1-212ENST00000560861 CSMD1Q96PZ7 3565 aa9.27□□□□□ -0.93
SNX1-212ENST00000560861 UNC79Q9P2D8 2635 aa9.27□□□□□ -0.93
SNX1-212ENST00000560861 APCP25054 2843 aa9.27□□□□□ -0.93
SNX1-212ENST00000560861 A8MXK9 166 aa9.26□□□□□ -0.93
SNX1-212ENST00000560861 G3V3Q6 166 aa9.26□□□□□ -0.93
SNX1-212ENST00000560861 BOLA2-SMG1P6H3BVE0 249 aa9.26□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 58.3 ms