RNA–Protein interactions for RNA: ENST00000560858.1

SPG11-223, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 5

Gene SPG11, Length 447 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-223ENST00000560858 B4DEV8 164 aa2.07□□□□□ -2.08
SPG11-223ENST00000560858 F5H5K5 113 aa2.07□□□□□ -2.08
SPG11-223ENST00000560858 NPIPA3F8WFD2 350 aa2.07□□□□□ -2.08
SPG11-223ENST00000560858 H0Y980 276 aa2.07□□□□□ -2.08
SPG11-223ENST00000560858 H0YL77 283 aa2.07□□□□□ -2.08
SPG11-223ENST00000560858 M0R036 132 aa2.07□□□□□ -2.08
SPG11-223ENST00000560858 WRBO00258 174 aa2.07□□□□□ -2.08
SPG11-223ENST00000560858 TP53I11O14683 189 aa2.07□□□□□ -2.08
SPG11-223ENST00000560858 HSD17B6O14756 317 aa2.07□□□□□ -2.08
SPG11-223ENST00000560858 PHOX2AO14813 284 aa2.07□□□□□ -2.08
SPG11-223ENST00000560858 GEMIN2O14893 280 aaKnown RBP2.07□□□□□ -2.08
SPG11-223ENST00000560858 YKT6O15498 198 aa2.07□□□□□ -2.08
SPG11-223ENST00000560858 PHF1O43189 567 aaPredicted RBP2.07□□□□□ -2.08
SPG11-223ENST00000560858 TGOLN2O43493 480 aa2.07□□□□□ -2.08
SPG11-223ENST00000560858 SPRY1O43609 319 aaPredicted RBP2.07□□□□□ -2.08
SPG11-223ENST00000560858 ANGPTL7O43827 346 aa2.07□□□□□ -2.08
SPG11-223ENST00000560858 ZIC3O60481 467 aa2.07□□□□□ -2.08
SPG11-223ENST00000560858 SCRG1O75711 98 aa2.07□□□□□ -2.08
SPG11-223ENST00000560858 OR2C1O95371 312 aa2.07□□□□□ -2.08
SPG11-223ENST00000560858 NAPSAO96009 420 aa2.07□□□□□ -2.08
SPG11-223ENST00000560858 F10P00742 488 aa2.07□□□□□ -2.08
SPG11-223ENST00000560858 NRASP01111 189 aa2.07□□□□□ -2.08
SPG11-223ENST00000560858 IFNA17P01571 189 aa2.07□□□□□ -2.08
SPG11-223ENST00000560858 HBE1P02100 147 aa2.07□□□□□ -2.08
SPG11-223ENST00000560858 S100A6P06703 90 aa2.07□□□□□ -2.08
SPG11-223ENST00000560858 MMP7P09237 267 aaPredicted RBP2.07□□□□□ -2.08
SPG11-223ENST00000560858 ZNF806P0C7X5 589 aa2.07□□□□□ -2.08
SPG11-223ENST00000560858 CCL3P10147 92 aa2.07□□□□□ -2.08
SPG11-223ENST00000560858 COX5BP10606 129 aa2.07□□□□□ -2.08
SPG11-223ENST00000560858 FGF5P12034 268 aa2.07□□□□□ -2.08
SPG11-223ENST00000560858 COX6A1P12074 109 aa2.07□□□□□ -2.08
SPG11-223ENST00000560858 PAX1P15863 534 aa2.07□□□□□ -2.08
SPG11-223ENST00000560858 ZNF32P17041 273 aa2.07□□□□□ -2.08
SPG11-223ENST00000560858 TCN2P20062 427 aa2.07□□□□□ -2.08
SPG11-223ENST00000560858 VDAC1P21796 283 aa2.07□□□□□ -2.08
SPG11-223ENST00000560858 AADACP22760 399 aa2.07□□□□□ -2.08
SPG11-223ENST00000560858 ATP6V0CP27449 155 aa2.07□□□□□ -2.08
SPG11-223ENST00000560858 SRD5A2P31213 254 aa2.07□□□□□ -2.08
SPG11-223ENST00000560858 OPRM1P35372 400 aa2.07□□□□□ -2.08
SPG11-223ENST00000560858 EIF2S3P41091 472 aaKnown RBP2.07□□□□□ -2.08
SPG11-223ENST00000560858 AKR1C3P42330 323 aa2.07□□□□□ -2.08
SPG11-223ENST00000560858 GUCA1AP43080 201 aaPredicted RBP2.07□□□□□ -2.08
SPG11-223ENST00000560858 NKX2-1P43699 371 aaPredicted RBP2.07□□□□□ -2.08
SPG11-223ENST00000560858 HTR5AP47898 357 aa2.07□□□□□ -2.08
SPG11-223ENST00000560858 CDX1P47902 265 aaPredicted RBP2.07□□□□□ -2.08
SPG11-223ENST00000560858 NPBWR2P48146 333 aa2.07□□□□□ -2.08
SPG11-223ENST00000560858 FHITP49789 147 aa2.07□□□□□ -2.08
SPG11-223ENST00000560858 RBP2P50120 134 aa2.07□□□□□ -2.08
SPG11-223ENST00000560858 SSR4P51571 173 aa2.07□□□□□ -2.08
SPG11-223ENST00000560858 FUT6P51993 359 aa2.07□□□□□ -2.08
SPG11-223ENST00000560858 MTCP1P56278 107 aa2.07□□□□□ -2.08
SPG11-223ENST00000560858 DSCR4P56555 118 aaPredicted RBP2.07□□□□□ -2.08
SPG11-223ENST00000560858 CLDN15P56746 228 aa2.07□□□□□ -2.08
SPG11-223ENST00000560858 B3GALT5-AS1P59052 145 aa2.07□□□□□ -2.08
SPG11-223ENST00000560858 FXYD4P59646 89 aa2.07□□□□□ -2.08
SPG11-223ENST00000560858 CD81P60033 236 aa2.07□□□□□ -2.08
SPG11-223ENST00000560858 FGF12P61328 243 aa2.07□□□□□ -2.08
SPG11-223ENST00000560858 ERVK11-1P61568 191 aa2.07□□□□□ -2.08
SPG11-223ENST00000560858 HERV-K104P61576 105 aa2.07□□□□□ -2.08
SPG11-223ENST00000560858 POLR2GP62487 172 aaKnown RBP eCLIP2.07□□□□□ -2.08
SPG11-223ENST00000560858 CCL7P80098 99 aa2.07□□□□□ -2.08
SPG11-223ENST00000560858 FOXO1Q12778 655 aa2.07□□□□□ -2.08
SPG11-223ENST00000560858 PNRC1Q12796 327 aaPredicted RBP2.07□□□□□ -2.08
SPG11-223ENST00000560858 PMS2P11Q13670 270 aa2.07□□□□□ -2.08
SPG11-223ENST00000560858 GNMTQ14749 295 aa2.07□□□□□ -2.08
SPG11-223ENST00000560858 ODF1Q14990 250 aa2.07□□□□□ -2.08
SPG11-223ENST00000560858 HERPUD1Q15011 391 aa2.07□□□□□ -2.08
SPG11-223ENST00000560858 RSU1Q15404 277 aa2.07□□□□□ -2.08
SPG11-223ENST00000560858 TGIF1Q15583 401 aa2.07□□□□□ -2.08
SPG11-223ENST00000560858 TAF9Q16594 264 aa2.07□□□□□ -2.08
SPG11-223ENST00000560858 HAGHQ16775 308 aa2.07□□□□□ -2.08
SPG11-223ENST00000560858 MPV17LQ2QL34 196 aa2.07□□□□□ -2.08
SPG11-223ENST00000560858 PIGYQ3MUY2 71 aa2.07□□□□□ -2.08
SPG11-223ENST00000560858 KRTAP13-3Q3SY46 172 aa2.07□□□□□ -2.08
SPG11-223ENST00000560858 ABCA11PQ4W5N1 156 aa2.07□□□□□ -2.08
SPG11-223ENST00000560858 PHLDA2Q53GA4 152 aa2.07□□□□□ -2.08
SPG11-223ENST00000560858 KHDC3LQ587J8 217 aa2.07□□□□□ -2.08
SPG11-223ENST00000560858 SOHLH1Q5JUK2 328 aa2.07□□□□□ -2.08
SPG11-223ENST00000560858 ACER2Q5QJU3 275 aa2.07□□□□□ -2.08
SPG11-223ENST00000560858 TSPO2Q5TGU0 170 aa2.07□□□□□ -2.08
SPG11-223ENST00000560858 PRAMEF20Q5VT98 475 aa2.07□□□□□ -2.08
SPG11-223ENST00000560858 FAM69BQ5VUD6 431 aa2.07□□□□□ -2.08
SPG11-223ENST00000560858 FAM90A2PQ658T7 463 aa2.07□□□□□ -2.08
SPG11-223ENST00000560858 LCN10Q6JVE6 187 aa2.07□□□□□ -2.08
SPG11-223ENST00000560858 ZNF880Q6PDB4 577 aa2.07□□□□□ -2.08
SPG11-223ENST00000560858 TMEM182Q6ZP80 229 aaPredicted RBP2.07□□□□□ -2.08
SPG11-223ENST00000560858 SH2D6Q7Z4S9 175 aa2.07□□□□□ -2.08
SPG11-223ENST00000560858 SLC35E3Q7Z769 313 aa2.07□□□□□ -2.08
SPG11-223ENST00000560858 DPPA2Q7Z7J5 298 aa2.07□□□□□ -2.08
SPG11-223ENST00000560858 LINC00596Q86U02 117 aa2.07□□□□□ -2.08
SPG11-223ENST00000560858 FOXRED2Q8IWF2 684 aa2.07□□□□□ -2.08
SPG11-223ENST00000560858 SELENOHQ8IZQ5 122 aaKnown RBP2.07□□□□□ -2.08
SPG11-223ENST00000560858 SLC25A45Q8N413 288 aa2.07□□□□□ -2.08
SPG11-223ENST00000560858 OR2C3Q8N628 320 aa2.07□□□□□ -2.08
SPG11-223ENST00000560858 TMEM252Q8N6L7 170 aa2.07□□□□□ -2.08
SPG11-223ENST00000560858 ZNF565Q8N9K5 539 aa2.07□□□□□ -2.08
SPG11-223ENST00000560858 SUMF2Q8NBJ7 301 aa2.07□□□□□ -2.08
SPG11-223ENST00000560858 HSD17B11Q8NBQ5 300 aa2.07□□□□□ -2.08
SPG11-223ENST00000560858 OR5L1Q8NGL2 311 aa2.07□□□□□ -2.08
SPG11-223ENST00000560858 OR5D13Q8NGL4 314 aa2.07□□□□□ -2.08
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms