RNA–Protein interactions for RNA: ENST00000559989.1

CSPG4P12-202, Transcript of chondroitin sulfate proteoglycan 4 pseudogene 12, humanhuman

TSL 1 (best) BASIC

Gene CSPG4P12, Length 7,790 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG4P12-202ENST00000559989 OR8B12Q8NGG6 310 aa12.14□□□□□ -0.47
CSPG4P12-202ENST00000559989 LPAR2Q9HBW0 351 aa12.14□□□□□ -0.47
CSPG4P12-202ENST00000559989 NKX2-6A6NCS4 301 aa12.14□□□□□ -0.47
CSPG4P12-202ENST00000559989 GPX1P07203 203 aa12.14□□□□□ -0.47
CSPG4P12-202ENST00000559989 MALP21145 153 aa12.14□□□□□ -0.47
CSPG4P12-202ENST00000559989 PCGF1Q9BSM1 259 aa12.14□□□□□ -0.47
CSPG4P12-202ENST00000559989 TREM2Q9NZC2 230 aa12.14□□□□□ -0.47
CSPG4P12-202ENST00000559989 PLPP3O14495 311 aa12.14□□□□□ -0.47
CSPG4P12-202ENST00000559989 GALNSP34059 522 aa12.14□□□□□ -0.47
CSPG4P12-202ENST00000559989 PRSS12P56730 875 aa12.14□□□□□ -0.47
CSPG4P12-202ENST00000559989 MMDQ15546 238 aa12.14□□□□□ -0.47
CSPG4P12-202ENST00000559989 PRICKLE4Q2TBC4 344 aa12.14□□□□□ -0.47
CSPG4P12-202ENST00000559989 SLC25A2Q9BXI2 301 aa12.14□□□□□ -0.47
CSPG4P12-202ENST00000559989 CXorf65A6NEN9 183 aa12.14□□□□□ -0.47
CSPG4P12-202ENST00000559989 TMEM50AO95807 157 aa12.14□□□□□ -0.47
CSPG4P12-202ENST00000559989 SELENOTP62341 195 aa12.14□□□□□ -0.47
CSPG4P12-202ENST00000559989 ASB10Q8WXI3 467 aa12.14□□□□□ -0.47
CSPG4P12-202ENST00000559989 PSG2P11465 335 aa12.14□□□□□ -0.47
CSPG4P12-202ENST00000559989 MESTQ5EB52 335 aa12.14□□□□□ -0.47
CSPG4P12-202ENST00000559989 BIVMQ86UB2 503 aa12.14□□□□□ -0.47
CSPG4P12-202ENST00000559989 SIGLEC7Q9Y286 467 aa12.14□□□□□ -0.47
CSPG4P12-202ENST00000559989 IGHV3-21A0A0B4J1V1 117 aa12.14□□□□□ -0.47
CSPG4P12-202ENST00000559989 HOXA5P20719 270 aa12.14□□□□□ -0.47
CSPG4P12-202ENST00000559989 SRD5A2P31213 254 aa12.14□□□□□ -0.47
CSPG4P12-202ENST00000559989 FHITP49789 147 aa12.14□□□□□ -0.47
CSPG4P12-202ENST00000559989 PTPMT1Q8WUK0 201 aaPredicted RBP12.14□□□□□ -0.47
CSPG4P12-202ENST00000559989 C6orf106Q9H6K1 298 aaPredicted RBP12.14□□□□□ -0.47
CSPG4P12-202ENST00000559989 MMP25Q9NPA2 562 aa12.14□□□□□ -0.47
CSPG4P12-202ENST00000559989 SLC6A13Q9NSD5 602 aa12.14□□□□□ -0.47
CSPG4P12-202ENST00000559989 C7orf66A4D0T2 115 aa12.14□□□□□ -0.47
CSPG4P12-202ENST00000559989 ZFPL1O95159 310 aa12.14□□□□□ -0.47
CSPG4P12-202ENST00000559989 SNRPD3P62318 126 aaKnown RBP12.14□□□□□ -0.47
CSPG4P12-202ENST00000559989 SRSF6Q13247 344 aaKnown RBP12.14□□□□□ -0.47
CSPG4P12-202ENST00000559989 ADAD2Q8NCV1 583 aaKnown RBP12.14□□□□□ -0.47
CSPG4P12-202ENST00000559989 ST6GAL2Q96JF0 529 aa12.14□□□□□ -0.47
CSPG4P12-202ENST00000559989 FSCN3Q9NQT6 498 aa12.14□□□□□ -0.47
CSPG4P12-202ENST00000559989 A0A0B4J2E0 115 aa12.13□□□□□ -0.47
CSPG4P12-202ENST00000559989 A0A1B0GX12 115 aa12.13□□□□□ -0.47
CSPG4P12-202ENST00000559989 CFDP00746 253 aaPredicted RBP12.13□□□□□ -0.47
CSPG4P12-202ENST00000559989 SSPNQ14714 243 aa12.13□□□□□ -0.47
CSPG4P12-202ENST00000559989 DLK2Q6UY11 383 aa12.13□□□□□ -0.47
CSPG4P12-202ENST00000559989 PQLC2Q6ZP29 291 aa12.13□□□□□ -0.47
CSPG4P12-202ENST00000559989 SIGMAR1Q99720 223 aa12.13□□□□□ -0.47
CSPG4P12-202ENST00000559989 TRPM6Q9BX84 2022 aa12.13□□□□□ -0.47
CSPG4P12-202ENST00000559989 ATP5LO75964 103 aa12.13□□□□□ -0.47
CSPG4P12-202ENST00000559989 PAX2Q02962 417 aa12.13□□□□□ -0.47
CSPG4P12-202ENST00000559989 MS4A3Q96HJ5 214 aa12.13□□□□□ -0.47
CSPG4P12-202ENST00000559989 TNFRSF18Q9Y5U5 241 aa12.13□□□□□ -0.47
CSPG4P12-202ENST00000559989 TRAV30A0A087WSZ9 112 aa12.13□□□□□ -0.47
CSPG4P12-202ENST00000559989 PSMB11A5LHX3 300 aa12.13□□□□□ -0.47
CSPG4P12-202ENST00000559989 NPIPB8E9PQR5 432 aa12.13□□□□□ -0.47
CSPG4P12-202ENST00000559989 NPIPB9F8W1W9 429 aa12.13□□□□□ -0.47
CSPG4P12-202ENST00000559989 NPIPB7O75200 414 aa12.13□□□□□ -0.47
CSPG4P12-202ENST00000559989 CCL2P13500 99 aa12.13□□□□□ -0.47
CSPG4P12-202ENST00000559989 IL11RAQ14626 422 aa12.13□□□□□ -0.47
CSPG4P12-202ENST00000559989 PSMG4Q5JS54 123 aa12.13□□□□□ -0.47
CSPG4P12-202ENST00000559989 C9orf62Q8N4C0 152 aa12.13□□□□□ -0.47
CSPG4P12-202ENST00000559989 METTL1Q9UBP6 276 aaKnown RBP12.13□□□□□ -0.47
CSPG4P12-202ENST00000559989 TNFSF18Q9UNG2 199 aa12.13□□□□□ -0.47
CSPG4P12-202ENST00000559989 K7N7A8 449 aa12.13□□□□□ -0.47
CSPG4P12-202ENST00000559989 IGHV4-39P01824 125 aa12.13□□□□□ -0.47
CSPG4P12-202ENST00000559989 PDLIM7Q9NR12 457 aa12.13□□□□□ -0.47
CSPG4P12-202ENST00000559989 OR2A4O95047 310 aa12.13□□□□□ -0.47
CSPG4P12-202ENST00000559989 ATP6V0CP27449 155 aa12.13□□□□□ -0.47
CSPG4P12-202ENST00000559989 FOXC1Q12948 553 aa12.13□□□□□ -0.47
CSPG4P12-202ENST00000559989 TTC9CQ8N5M4 171 aa12.13□□□□□ -0.47
CSPG4P12-202ENST00000559989 OR2A7Q96R45 310 aa12.13□□□□□ -0.47
CSPG4P12-202ENST00000559989 PLSCR2Q9NRY7 297 aa12.13□□□□□ -0.47
CSPG4P12-202ENST00000559989 IGLV3-10A0A075B6K4 115 aa12.13□□□□□ -0.47
CSPG4P12-202ENST00000559989 FOXB2Q5VYV0 432 aa12.13□□□□□ -0.47
CSPG4P12-202ENST00000559989 FAM216AQ8WUB2 273 aa12.13□□□□□ -0.47
CSPG4P12-202ENST00000559989 SLC25A10Q9UBX3 287 aaPredicted RBP12.13□□□□□ -0.47
CSPG4P12-202ENST00000559989 HSPB1P04792 205 aaKnown RBP12.12□□□□□ -0.47
CSPG4P12-202ENST00000559989 FAM74A4Q5TZK3 123 aa12.12□□□□□ -0.47
CSPG4P12-202ENST00000559989 PRR13Q9NZ81 148 aa12.12□□□□□ -0.47
CSPG4P12-202ENST00000559989 FLRT3Q9NZU0 649 aa12.12□□□□□ -0.47
CSPG4P12-202ENST00000559989 COX11Q9Y6N1 276 aa12.12□□□□□ -0.47
CSPG4P12-202ENST00000559989 SHISA8B8ZZ34 492 aa12.12□□□□□ -0.47
CSPG4P12-202ENST00000559989 HPRT1P00492 218 aa12.12□□□□□ -0.47
CSPG4P12-202ENST00000559989 SRIP30626 198 aa12.12□□□□□ -0.47
CSPG4P12-202ENST00000559989 TRAV8-6A0A0B4J262 113 aa12.12□□□□□ -0.47
CSPG4P12-202ENST00000559989 ASAH2BP0C7U1 165 aa12.12□□□□□ -0.47
CSPG4P12-202ENST00000559989 HBBP68871 147 aa12.12□□□□□ -0.47
CSPG4P12-202ENST00000559989 FAM159AQ6UWV7 190 aa12.12□□□□□ -0.47
CSPG4P12-202ENST00000559989 FGF22Q9HCT0 170 aa12.12□□□□□ -0.47
CSPG4P12-202ENST00000559989 ASPDHA6ND91 283 aa12.12□□□□□ -0.47
CSPG4P12-202ENST00000559989 DLL1O00548 723 aa12.12□□□□□ -0.47
CSPG4P12-202ENST00000559989 TDGF1P13385 188 aa12.12□□□□□ -0.47
CSPG4P12-202ENST00000559989 CTAG1AP78358 180 aa12.12□□□□□ -0.47
CSPG4P12-202ENST00000559989 RGPD8O14715 1765 aaPredicted RBP12.12□□□□□ -0.47
CSPG4P12-202ENST00000559989 SRSF12Q8WXF0 261 aaKnown RBP12.12□□□□□ -0.47
CSPG4P12-202ENST00000559989 ARRDC1-AS1Q9H2J1 176 aa12.12□□□□□ -0.47
CSPG4P12-202ENST00000559989 CBLN4Q9NTU7 201 aa12.12□□□□□ -0.47
CSPG4P12-202ENST00000559989 TMEM106BQ9NUM4 274 aa12.12□□□□□ -0.47
CSPG4P12-202ENST00000559989 SLC25A15Q9Y619 301 aa12.12□□□□□ -0.47
CSPG4P12-202ENST00000559989 TRBV20OR9-2A0A075B6H5 130 aa12.12□□□□□ -0.47
CSPG4P12-202ENST00000559989 TRA2AQ13595 282 aaKnown RBP eCLIP12.12□□□□□ -0.47
CSPG4P12-202ENST00000559989 FAM106AQ4KMX7 169 aa12.12□□□□□ -0.47
CSPG4P12-202ENST00000559989 GNRHR2Q96P88 292 aa12.12□□□□□ -0.47
CSPG4P12-202ENST00000559989 ECM29Q5VYK3 1845 aa12.11□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 46.4 ms