RNA–Protein interactions for RNA: ENST00000559850.5

RABGGTA-211, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 3

Gene RABGGTA, Length 534 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-211ENST00000559850 SCTP09683 121 aa11.8□□□□□ -0.52
RABGGTA-211ENST00000559850 GNB3P16520 340 aa11.8□□□□□ -0.52
RABGGTA-211ENST00000559850 TGFBR1P36897 503 aa11.8□□□□□ -0.52
RABGGTA-211ENST00000559850 OR3A3P47888 321 aa11.8□□□□□ -0.52
RABGGTA-211ENST00000559850 HLA-DRB3P79483 266 aa11.8□□□□□ -0.52
RABGGTA-211ENST00000559850 HTD2P86397 168 aa11.8□□□□□ -0.52
RABGGTA-211ENST00000559850 NSUN5P1Q3KNT7 163 aa11.8□□□□□ -0.52
RABGGTA-211ENST00000559850 C10orf99Q6UWK7 81 aa11.8□□□□□ -0.52
RABGGTA-211ENST00000559850 TGIF2LXQ8IUE1 241 aa11.8□□□□□ -0.52
RABGGTA-211ENST00000559850 ODF3L1Q8IXM7 274 aa11.8□□□□□ -0.52
RABGGTA-211ENST00000559850 MAFIPQ8WZ33 124 aa11.8□□□□□ -0.52
RABGGTA-211ENST00000559850 RAB3CQ96E17 227 aa11.8□□□□□ -0.52
RABGGTA-211ENST00000559850 EAF1Q96JC9 268 aaPredicted RBP11.8□□□□□ -0.52
RABGGTA-211ENST00000559850 CMSS1Q9BQ75 279 aaKnown RBP11.8□□□□□ -0.52
RABGGTA-211ENST00000559850 CENPOQ9BU64 300 aa11.8□□□□□ -0.52
RABGGTA-211ENST00000559850 WNT10AQ9GZT5 417 aa11.8□□□□□ -0.52
RABGGTA-211ENST00000559850 Q9N2K0 584 aa11.8□□□□□ -0.52
RABGGTA-211ENST00000559850 DAPK2Q9UIK4 370 aa11.8□□□□□ -0.52
RABGGTA-211ENST00000559850 YPEL1O60688 119 aa11.79□□□□□ -0.52
RABGGTA-211ENST00000559850 SNRPBP14678 240 aaKnown RBP11.79□□□□□ -0.52
RABGGTA-211ENST00000559850 SDC2P34741 201 aa11.79□□□□□ -0.52
RABGGTA-211ENST00000559850 Q3ZCU0 254 aa11.79□□□□□ -0.52
RABGGTA-211ENST00000559850 ZNF554Q86TJ5 538 aa11.79□□□□□ -0.52
RABGGTA-211ENST00000559850 C5orf56Q8N8D9 126 aa11.79□□□□□ -0.52
RABGGTA-211ENST00000559850 TSPAN14Q8NG11 270 aa11.79□□□□□ -0.52
RABGGTA-211ENST00000559850 OR10R2Q8NGX6 335 aa11.79□□□□□ -0.52
RABGGTA-211ENST00000559850 WIPF2Q8TF74 440 aaPredicted RBP11.79□□□□□ -0.52
RABGGTA-211ENST00000559850 YPEL2Q96QA6 119 aa11.79□□□□□ -0.52
RABGGTA-211ENST00000559850 CITED2Q99967 270 aaPredicted RBP11.79□□□□□ -0.52
RABGGTA-211ENST00000559850 MRPL20Q9BYC9 149 aaKnown RBP11.79□□□□□ -0.52
RABGGTA-211ENST00000559850 ATG5Q9H1Y0 275 aa11.79□□□□□ -0.52
RABGGTA-211ENST00000559850 C12orf4Q9NQ89 552 aa11.79□□□□□ -0.52
RABGGTA-211ENST00000559850 SLC23A1Q9UHI7 598 aa11.79□□□□□ -0.52
RABGGTA-211ENST00000559850 ELF5Q9UKW6 265 aaPredicted RBP11.79□□□□□ -0.52
RABGGTA-211ENST00000559850 SAA2-SAA4A0A096LPE2 208 aa11.78□□□□□ -0.52
RABGGTA-211ENST00000559850 TRBV6-6A0A0A6YYG2 114 aa11.78□□□□□ -0.52
RABGGTA-211ENST00000559850 NOTOA8MTQ0 251 aa11.78□□□□□ -0.52
RABGGTA-211ENST00000559850 RAB27BO00194 218 aa11.78□□□□□ -0.52
RABGGTA-211ENST00000559850 MFNGO00587 321 aa11.78□□□□□ -0.52
RABGGTA-211ENST00000559850 CSF1P09603 554 aa11.78□□□□□ -0.52
RABGGTA-211ENST00000559850 SAA2P0DJI9 122 aaPredicted RBP11.78□□□□□ -0.52
RABGGTA-211ENST00000559850 RAB6AP20340 208 aa11.78□□□□□ -0.52
RABGGTA-211ENST00000559850 ZNF137PP52743 207 aa11.78□□□□□ -0.52
RABGGTA-211ENST00000559850 MOB1BQ7L9L4 216 aa11.78□□□□□ -0.52
RABGGTA-211ENST00000559850 IZUMO1Q8IYV9 350 aa11.78□□□□□ -0.52
RABGGTA-211ENST00000559850 Q8N6K4 173 aa11.78□□□□□ -0.52
RABGGTA-211ENST00000559850 DTX3Q8N9I9 347 aa11.78□□□□□ -0.52
RABGGTA-211ENST00000559850 OR2AK2Q8NG84 335 aa11.78□□□□□ -0.52
RABGGTA-211ENST00000559850 LGALS14Q8TCE9 139 aa11.78□□□□□ -0.52
RABGGTA-211ENST00000559850 KCTD7Q96MP8 289 aa11.78□□□□□ -0.52
RABGGTA-211ENST00000559850 IFI27L2Q9H2X8 130 aa11.78□□□□□ -0.52
RABGGTA-211ENST00000559850 RIMS4Q9H426 269 aaPredicted RBP11.78□□□□□ -0.52
RABGGTA-211ENST00000559850 ZNF230Q9UIE0 474 aaPredicted RBP11.78□□□□□ -0.52
RABGGTA-211ENST00000559850 LINC00527Q9UJ94 153 aa11.78□□□□□ -0.52
RABGGTA-211ENST00000559850 VWFP04275 2813 aa11.78□□□□□ -0.52
RABGGTA-211ENST00000559850 IGKV1-6A0A0C4DH72 117 aa11.77□□□□□ -0.53
RABGGTA-211ENST00000559850 A0A1W2PRX2 142 aa11.77□□□□□ -0.53
RABGGTA-211ENST00000559850 LINC01548A6NM66 108 aa11.77□□□□□ -0.53
RABGGTA-211ENST00000559850 NCBP2LA6PVI3 153 aaKnown RBP11.77□□□□□ -0.53
RABGGTA-211ENST00000559850 LANCL1O43813 399 aa11.77□□□□□ -0.53
RABGGTA-211ENST00000559850 RGS11O94810 467 aa11.77□□□□□ -0.53
RABGGTA-211ENST00000559850 CD3GP09693 182 aa11.77□□□□□ -0.53
RABGGTA-211ENST00000559850 EBI3Q14213 229 aa11.77□□□□□ -0.53
RABGGTA-211ENST00000559850 C2orf68Q2NKX9 166 aa11.77□□□□□ -0.53
RABGGTA-211ENST00000559850 RPL39P5Q59GN2 51 aa11.77□□□□□ -0.53
RABGGTA-211ENST00000559850 SFXN4Q6P4A7 337 aa11.77□□□□□ -0.53
RABGGTA-211ENST00000559850 CENPVQ7Z7K6 275 aaPredicted RBP11.77□□□□□ -0.53
RABGGTA-211ENST00000559850 OR5AU1Q8NGC0 362 aa11.77□□□□□ -0.53
RABGGTA-211ENST00000559850 OR2T10Q8NGZ9 312 aa11.77□□□□□ -0.53
RABGGTA-211ENST00000559850 ABHD14BQ96IU4 210 aa11.77□□□□□ -0.53
RABGGTA-211ENST00000559850 NOL4LQ96MY1 436 aaPredicted RBP11.77□□□□□ -0.53
RABGGTA-211ENST00000559850 MGAM2Q2M2H8 2515 aa11.76□□□□□ -0.53
RABGGTA-211ENST00000559850 A0A087WXM4 84 aa11.76□□□□□ -0.53
RABGGTA-211ENST00000559850 ADARB2-AS1A8MUL3 147 aa11.76□□□□□ -0.53
RABGGTA-211ENST00000559850 M0QZK8 103 aa11.76□□□□□ -0.53
RABGGTA-211ENST00000559850 TNFAIP8O95379 198 aa11.76□□□□□ -0.53
RABGGTA-211ENST00000559850 MOSP00540 346 aa11.76□□□□□ -0.53
RABGGTA-211ENST00000559850 FCGR3AP08637 254 aa11.76□□□□□ -0.53
RABGGTA-211ENST00000559850 HIST1H1DP16402 221 aaKnown RBP11.76□□□□□ -0.53
RABGGTA-211ENST00000559850 CD1BP29016 333 aa11.76□□□□□ -0.53
RABGGTA-211ENST00000559850 CEACAM6P40199 344 aa11.76□□□□□ -0.53
RABGGTA-211ENST00000559850 LSM3P62310 102 aaKnown RBP11.76□□□□□ -0.53
RABGGTA-211ENST00000559850 LSAMPQ13449 338 aa11.76□□□□□ -0.53
RABGGTA-211ENST00000559850 ARFRP1Q13795 201 aa11.76□□□□□ -0.53
RABGGTA-211ENST00000559850 TCTEX1D4Q5JR98 221 aa11.76□□□□□ -0.53
RABGGTA-211ENST00000559850 STEAP3Q658P3 488 aa11.76□□□□□ -0.53
RABGGTA-211ENST00000559850 ZNF833PQ6ZTB9 187 aa11.76□□□□□ -0.53
RABGGTA-211ENST00000559850 TPRA1Q86W33 373 aa11.76□□□□□ -0.53
RABGGTA-211ENST00000559850 OR5H6Q8NGV6 325 aa11.76□□□□□ -0.53
RABGGTA-211ENST00000559850 YIPF6Q96EC8 236 aa11.76□□□□□ -0.53
RABGGTA-211ENST00000559850 RITA1Q96K30 269 aa11.76□□□□□ -0.53
RABGGTA-211ENST00000559850 NABP2Q9BQ15 211 aa11.76□□□□□ -0.53
RABGGTA-211ENST00000559850 MMP27Q9H306 513 aa11.76□□□□□ -0.53
RABGGTA-211ENST00000559850 RNF150Q9ULK6 438 aa11.76□□□□□ -0.53
RABGGTA-211ENST00000559850 WNK1Q9H4A3 2382 aa11.76□□□□□ -0.53
RABGGTA-211ENST00000559850 METTL21EPA6NDL7 271 aa11.75□□□□□ -0.53
RABGGTA-211ENST00000559850 TRDCB7Z8K6 153 aa11.75□□□□□ -0.53
RABGGTA-211ENST00000559850 HSPA12AO43301 675 aa11.75□□□□□ -0.53
RABGGTA-211ENST00000559850 TXNL1O43396 289 aa11.75□□□□□ -0.53
RABGGTA-211ENST00000559850 GSTT2P0CG29 244 aa11.75□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms