RNA–Protein interactions for RNA: ENST00000559397.5

TPM1-219, Transcript of tropomyosin 1, humanhuman

TSL 2 BASIC

Gene TPM1, Length 1,655 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-219ENST00000559397 C12orf77C9JDV5 145 aa13.66□□□□□ -0.22
TPM1-219ENST00000559397 DVL1O14640 695 aa13.66□□□□□ -0.22
TPM1-219ENST00000559397 HEXAP06865 529 aa13.66□□□□□ -0.22
TPM1-219ENST00000559397 IGKV1-13P0DP09 117 aa13.66□□□□□ -0.22
TPM1-219ENST00000559397 GNRHRP30968 328 aa13.66□□□□□ -0.22
TPM1-219ENST00000559397 ANKRD55Q3KP44 614 aa13.66□□□□□ -0.22
TPM1-219ENST00000559397 KIAA2026Q5HYC2 2103 aa13.66□□□□□ -0.22
TPM1-219ENST00000559397 C6orf183Q5T699 404 aa13.66□□□□□ -0.22
TPM1-219ENST00000559397 WDR25Q64LD2 544 aaPredicted RBP13.66□□□□□ -0.22
TPM1-219ENST00000559397 SGPP2Q8IWX5 399 aa13.66□□□□□ -0.22
TPM1-219ENST00000559397 OR2T35Q8NGX2 323 aa13.66□□□□□ -0.22
TPM1-219ENST00000559397 RAB39BQ96DA2 213 aa13.66□□□□□ -0.22
TPM1-219ENST00000559397 GALNT14Q96FL9 552 aa13.66□□□□□ -0.22
TPM1-219ENST00000559397 TOLLIPQ9H0E2 274 aa13.66□□□□□ -0.22
TPM1-219ENST00000559397 SLC2A9Q9NRM0 540 aa13.66□□□□□ -0.22
TPM1-219ENST00000559397 SLC25A10Q9UBX3 287 aaPredicted RBP13.66□□□□□ -0.22
TPM1-219ENST00000559397 OR2W1Q9Y3N9 320 aa13.66□□□□□ -0.22
TPM1-219ENST00000559397 CR1P17927 2039 aa13.65□□□□□ -0.22
TPM1-219ENST00000559397 DOCK11Q5JSL3 2073 aa13.65□□□□□ -0.22
TPM1-219ENST00000559397 YLPM1P49750 1951 aaKnown RBP13.65□□□□□ -0.22
TPM1-219ENST00000559397 NDUFB3O43676 98 aa13.65□□□□□ -0.22
TPM1-219ENST00000559397 RND3P61587 244 aa13.65□□□□□ -0.22
TPM1-219ENST00000559397 SLC9A3R2Q15599 337 aa13.65□□□□□ -0.22
TPM1-219ENST00000559397 LRRC10Q5BKY1 277 aa13.65□□□□□ -0.22
TPM1-219ENST00000559397 LIN54Q6MZP7 749 aa13.65□□□□□ -0.22
TPM1-219ENST00000559397 TRAT1Q6PIZ9 186 aa13.65□□□□□ -0.22
TPM1-219ENST00000559397 OR11H4Q8NGC9 324 aa13.65□□□□□ -0.22
TPM1-219ENST00000559397 COQ8AQ8NI60 647 aa13.65□□□□□ -0.22
TPM1-219ENST00000559397 NAA60Q9H7X0 242 aa13.65□□□□□ -0.22
TPM1-219ENST00000559397 OR1A1Q9P1Q5 309 aa13.65□□□□□ -0.22
TPM1-219ENST00000559397 ITPR3Q14573 2671 aa13.65□□□□□ -0.23
TPM1-219ENST00000559397 MALRD1Q5VYJ5 2156 aa13.64□□□□□ -0.23
TPM1-219ENST00000559397 ODAMA1E959 279 aa13.64□□□□□ -0.23
TPM1-219ENST00000559397 IFNA2P01563 188 aa13.64□□□□□ -0.23
TPM1-219ENST00000559397 ABCA11PQ4W5N1 156 aa13.64□□□□□ -0.23
TPM1-219ENST00000559397 Q5BKY6 102 aa13.64□□□□□ -0.23
TPM1-219ENST00000559397 C11orf88Q6PI97 169 aa13.64□□□□□ -0.23
TPM1-219ENST00000559397 LDLRAD3Q86YD5 345 aa13.64□□□□□ -0.23
TPM1-219ENST00000559397 FAM185AQ8N0U4 392 aa13.64□□□□□ -0.23
TPM1-219ENST00000559397 CCDC71LQ8N9Z2 235 aa13.64□□□□□ -0.23
TPM1-219ENST00000559397 OR5D13Q8NGL4 314 aa13.64□□□□□ -0.23
TPM1-219ENST00000559397 OR13A1Q8NGR1 328 aa13.64□□□□□ -0.23
TPM1-219ENST00000559397 OR1L1Q8NH94 360 aa13.64□□□□□ -0.23
TPM1-219ENST00000559397 RTN4IP1Q8WWV3 396 aaPredicted RBP13.64□□□□□ -0.23
TPM1-219ENST00000559397 IL1F10Q8WWZ1 152 aa13.64□□□□□ -0.23
TPM1-219ENST00000559397 C1orf159Q96HA4 380 aa13.64□□□□□ -0.23
TPM1-219ENST00000559397 CLN8Q9UBY8 286 aa13.64□□□□□ -0.23
TPM1-219ENST00000559397 KIAA1324LA8MWY0 1029 aaPredicted RBP13.63□□□□□ -0.23
TPM1-219ENST00000559397 FAM157AC9JC47 383 aa13.63□□□□□ -0.23
TPM1-219ENST00000559397 RGS11O94810 467 aa13.63□□□□□ -0.23
TPM1-219ENST00000559397 P2RX3P56373 397 aa13.63□□□□□ -0.23
TPM1-219ENST00000559397 GNB2P62879 340 aa13.63□□□□□ -0.23
TPM1-219ENST00000559397 PHLDA2Q53GA4 152 aa13.63□□□□□ -0.23
TPM1-219ENST00000559397 CIARTQ8N365 385 aaPredicted RBP13.63□□□□□ -0.23
TPM1-219ENST00000559397 TPRX1Q8N7U7 411 aa13.63□□□□□ -0.23
TPM1-219ENST00000559397 MAPK1IP1LQ8NDC0 245 aa13.63□□□□□ -0.23
TPM1-219ENST00000559397 MRGPRDQ8TDS7 321 aa13.63□□□□□ -0.23
TPM1-219ENST00000559397 SECTM1Q8WVN6 248 aa13.63□□□□□ -0.23
TPM1-219ENST00000559397 GALMQ96C23 342 aa13.63□□□□□ -0.23
TPM1-219ENST00000559397 SSBP3Q9BWW4 388 aaPredicted RBP13.63□□□□□ -0.23
TPM1-219ENST00000559397 SLC5A7Q9GZV3 580 aa13.63□□□□□ -0.23
TPM1-219ENST00000559397 RAB18Q9NP72 206 aa13.63□□□□□ -0.23
TPM1-219ENST00000559397 ABCA2Q9BZC7 2435 aa13.63□□□□□ -0.23
TPM1-219ENST00000559397 TEX13DA0A0J9YY54 714 aaPredicted RBP13.63□□□□□ -0.23
TPM1-219ENST00000559397 A8MXK9 166 aa13.63□□□□□ -0.23
TPM1-219ENST00000559397 C15orf65H3BRN8 121 aa13.63□□□□□ -0.23
TPM1-219ENST00000559397 GPR31O00270 319 aa13.63□□□□□ -0.23
TPM1-219ENST00000559397 GPR37O15354 613 aa13.63□□□□□ -0.23
TPM1-219ENST00000559397 PHF1O43189 567 aaPredicted RBP13.63□□□□□ -0.23
TPM1-219ENST00000559397 HBZP02008 142 aa13.63□□□□□ -0.23
TPM1-219ENST00000559397 NDUFB7P17568 137 aa13.63□□□□□ -0.23
TPM1-219ENST00000559397 ZFP36P26651 326 aaKnown RBP13.63□□□□□ -0.23
TPM1-219ENST00000559397 EDDM3AQ14507 147 aa13.63□□□□□ -0.23
TPM1-219ENST00000559397 ESCO2Q56NI9 601 aa13.63□□□□□ -0.23
TPM1-219ENST00000559397 LAMTOR1Q6IAA8 161 aa13.63□□□□□ -0.23
TPM1-219ENST00000559397 KCTD9Q7L273 389 aa13.63□□□□□ -0.23
TPM1-219ENST00000559397 ZNF565Q8N9K5 539 aa13.63□□□□□ -0.23
TPM1-219ENST00000559397 KCNIP3Q9Y2W7 256 aa13.63□□□□□ -0.23
TPM1-219ENST00000559397 MED13LQ71F56 2210 aa13.62□□□□□ -0.23
TPM1-219ENST00000559397 TEX15Q9BXT5 2789 aa13.62□□□□□ -0.23
TPM1-219ENST00000559397 MPPED1O15442 326 aa13.62□□□□□ -0.23
TPM1-219ENST00000559397 GZMHP20718 246 aa13.62□□□□□ -0.23
TPM1-219ENST00000559397 TMEM187Q14656 261 aa13.62□□□□□ -0.23
TPM1-219ENST00000559397 ZNF818PQ6ZRF7 136 aa13.62□□□□□ -0.23
TPM1-219ENST00000559397 PRR18Q8N4B5 295 aa13.62□□□□□ -0.23
TPM1-219ENST00000559397 OR10V1Q8NGI7 309 aa13.62□□□□□ -0.23
TPM1-219ENST00000559397 UBALD1Q8TB05 177 aa13.62□□□□□ -0.23
TPM1-219ENST00000559397 DCTN5Q9BTE1 182 aa13.62□□□□□ -0.23
TPM1-219ENST00000559397 SUCNR1Q9BXA5 334 aa13.62□□□□□ -0.23
TPM1-219ENST00000559397 CCL28Q9NRJ3 127 aa13.62□□□□□ -0.23
TPM1-219ENST00000559397 RDH8Q9NYR8 311 aa13.62□□□□□ -0.23
TPM1-219ENST00000559397 PRR13Q9NZ81 148 aa13.62□□□□□ -0.23
TPM1-219ENST00000559397 SVEP1Q4LDE5 3571 aa13.62□□□□□ -0.23
TPM1-219ENST00000559397 DSCAML1Q8TD84 2053 aa13.62□□□□□ -0.23
TPM1-219ENST00000559397 ANK3Q12955 4377 aaKnown RBP13.61□□□□□ -0.23
TPM1-219ENST00000559397 ARHGAP32A7KAX9 2087 aa13.61□□□□□ -0.23
TPM1-219ENST00000559397 CCSO14618 274 aa13.61□□□□□ -0.23
TPM1-219ENST00000559397 HSPA12AO43301 675 aa13.61□□□□□ -0.23
TPM1-219ENST00000559397 CGB3P0DN86 165 aa13.61□□□□□ -0.23
TPM1-219ENST00000559397 CGB7P0DN87 165 aa13.61□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms