RNA–Protein interactions for RNA: ENST00000558937.1

SMAD6-203, Transcript of SMAD family member 6, humanhuman

TSL 5

Gene SMAD6, Length 632 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD6-203ENST00000558937 DNAH3Q8TD57 4116 aa11.87□□□□□ -0.51
SMAD6-203ENST00000558937 A0A0A6YYD4 124 aa11.86□□□□□ -0.51
SMAD6-203ENST00000558937 K7EIL1 84 aa11.86□□□□□ -0.51
SMAD6-203ENST00000558937 RRP9O43818 475 aaKnown RBP11.86□□□□□ -0.51
SMAD6-203ENST00000558937 BPNT1O95861 308 aa11.86□□□□□ -0.51
SMAD6-203ENST00000558937 MYF6P23409 242 aa11.86□□□□□ -0.51
SMAD6-203ENST00000558937 HOXD3P31249 432 aaPredicted RBP11.86□□□□□ -0.51
SMAD6-203ENST00000558937 KRTAP10-11P60412 298 aa11.86□□□□□ -0.51
SMAD6-203ENST00000558937 RPS25P62851 125 aaKnown RBP11.86□□□□□ -0.51
SMAD6-203ENST00000558937 QRFPP83859 136 aa11.86□□□□□ -0.51
SMAD6-203ENST00000558937 TPBGQ13641 420 aa11.86□□□□□ -0.51
SMAD6-203ENST00000558937 LY6G6FQ5SQ64 297 aa11.86□□□□□ -0.51
SMAD6-203ENST00000558937 TMEM91Q6ZNR0 172 aa11.86□□□□□ -0.51
SMAD6-203ENST00000558937 LCNL1Q6ZST4 164 aa11.86□□□□□ -0.51
SMAD6-203ENST00000558937 GALMQ96C23 342 aa11.86□□□□□ -0.51
SMAD6-203ENST00000558937 GFI1Q99684 422 aa11.86□□□□□ -0.51
SMAD6-203ENST00000558937 NABP2Q9BQ15 211 aa11.86□□□□□ -0.51
SMAD6-203ENST00000558937 GON7Q9BXV9 100 aa11.86□□□□□ -0.51
SMAD6-203ENST00000558937 RGS10O43665 173 aa11.85□□□□□ -0.51
SMAD6-203ENST00000558937 RGS11O94810 467 aa11.85□□□□□ -0.51
SMAD6-203ENST00000558937 NAPSAO96009 420 aa11.85□□□□□ -0.51
SMAD6-203ENST00000558937 RPLP1P05386 114 aaKnown RBP11.85□□□□□ -0.51
SMAD6-203ENST00000558937 HSMCR30P0CW71 290 aa11.85□□□□□ -0.51
SMAD6-203ENST00000558937 BLVRBP30043 206 aaPredicted RBP11.85□□□□□ -0.51
SMAD6-203ENST00000558937 SOX6P35712 828 aa11.85□□□□□ -0.51
SMAD6-203ENST00000558937 OR3A3P47888 321 aa11.85□□□□□ -0.51
SMAD6-203ENST00000558937 CFHR3Q02985 330 aa11.85□□□□□ -0.51
SMAD6-203ENST00000558937 FOXE3Q13461 319 aa11.85□□□□□ -0.51
SMAD6-203ENST00000558937 P2RY14Q15391 338 aa11.85□□□□□ -0.51
SMAD6-203ENST00000558937 MMDQ15546 238 aa11.85□□□□□ -0.51
SMAD6-203ENST00000558937 CXorf66Q5JRM2 361 aaPredicted RBP11.85□□□□□ -0.51
SMAD6-203ENST00000558937 ZNF880Q6PDB4 577 aa11.85□□□□□ -0.51
SMAD6-203ENST00000558937 ZNF833PQ6ZTB9 187 aa11.85□□□□□ -0.51
SMAD6-203ENST00000558937 DUX3Q96PT4 197 aa11.85□□□□□ -0.51
SMAD6-203ENST00000558937 ANKRD60Q9BZ19 345 aa11.85□□□□□ -0.51
SMAD6-203ENST00000558937 GPR61Q9BZJ8 451 aa11.85□□□□□ -0.51
SMAD6-203ENST00000558937 LPAR5Q9H1C0 372 aa11.85□□□□□ -0.51
SMAD6-203ENST00000558937 IFI27L2Q9H2X8 130 aa11.85□□□□□ -0.51
SMAD6-203ENST00000558937 CHMP1AQ9HD42 196 aaPredicted RBP11.85□□□□□ -0.51
SMAD6-203ENST00000558937 ABRACLQ9P1F3 81 aa11.85□□□□□ -0.51
SMAD6-203ENST00000558937 LRRC42Q9Y546 428 aa11.85□□□□□ -0.51
SMAD6-203ENST00000558937 SAA2-SAA4A0A096LPE2 208 aa11.84□□□□□ -0.51
SMAD6-203ENST00000558937 WI2-2373I1.2A0A1W2PRP0 233 aa11.84□□□□□ -0.51
SMAD6-203ENST00000558937 SLC17A2O00624 439 aa11.84□□□□□ -0.51
SMAD6-203ENST00000558937 ELANEP08246 267 aa11.84□□□□□ -0.51
SMAD6-203ENST00000558937 SAA2P0DJI9 122 aaPredicted RBP11.84□□□□□ -0.51
SMAD6-203ENST00000558937 SLC2A2P11168 524 aaPredicted RBP11.84□□□□□ -0.51
SMAD6-203ENST00000558937 VDAC1P21796 283 aa11.84□□□□□ -0.51
SMAD6-203ENST00000558937 ACTBP60709 375 aa11.84□□□□□ -0.51
SMAD6-203ENST00000558937 EGFEM1PQ0D2K5 195 aa11.84□□□□□ -0.51
SMAD6-203ENST00000558937 MLLT11Q13015 90 aaPredicted RBP11.84□□□□□ -0.51
SMAD6-203ENST00000558937 MOB1BQ7L9L4 216 aa11.84□□□□□ -0.51
SMAD6-203ENST00000558937 RNF152Q8N8N0 203 aa11.84□□□□□ -0.51
SMAD6-203ENST00000558937 OR2AK2Q8NG84 335 aa11.84□□□□□ -0.51
SMAD6-203ENST00000558937 SETD6Q8TBK2 473 aa11.84□□□□□ -0.51
SMAD6-203ENST00000558937 IL1F10Q8WWZ1 152 aa11.84□□□□□ -0.51
SMAD6-203ENST00000558937 DPF1Q92782 380 aa11.84□□□□□ -0.51
SMAD6-203ENST00000558937 RAX2Q96IS3 184 aa11.84□□□□□ -0.51
SMAD6-203ENST00000558937 MCRIP2Q9BUT9 160 aaKnown RBP11.84□□□□□ -0.51
SMAD6-203ENST00000558937 CCDC90BQ9GZT6 254 aa11.84□□□□□ -0.51
SMAD6-203ENST00000558937 PLGRKTQ9HBL7 147 aa11.84□□□□□ -0.51
SMAD6-203ENST00000558937 ISYNA1Q9NPH2 558 aa11.84□□□□□ -0.51
SMAD6-203ENST00000558937 ZNF107Q9UII5 783 aaPredicted RBP11.84□□□□□ -0.51
SMAD6-203ENST00000558937 ZNF580Q9UK33 172 aa11.84□□□□□ -0.51
SMAD6-203ENST00000558937 AK6Q9Y3D8 172 aaKnown RBP11.84□□□□□ -0.51
SMAD6-203ENST00000558937 ST8SIA5O15466 376 aa11.83□□□□□ -0.52
SMAD6-203ENST00000558937 SOCS1O15524 211 aa11.83□□□□□ -0.52
SMAD6-203ENST00000558937 CRHBPP24387 322 aa11.83□□□□□ -0.52
SMAD6-203ENST00000558937 CNTFRP26992 372 aa11.83□□□□□ -0.52
SMAD6-203ENST00000558937 TRAM1Q15629 374 aa11.83□□□□□ -0.52
SMAD6-203ENST00000558937 DEFB136Q30KP8 78 aa11.83□□□□□ -0.52
SMAD6-203ENST00000558937 RITA1Q96K30 269 aa11.83□□□□□ -0.52
SMAD6-203ENST00000558937 KCTD7Q96MP8 289 aa11.83□□□□□ -0.52
SMAD6-203ENST00000558937 HDHD3Q9BSH5 251 aaPredicted RBP11.83□□□□□ -0.52
SMAD6-203ENST00000558937 URM1Q9BTM9 101 aaKnown RBP11.83□□□□□ -0.52
SMAD6-203ENST00000558937 PLEKHJ1Q9NW61 149 aa11.83□□□□□ -0.52
SMAD6-203ENST00000558937 STEAP1Q9UHE8 339 aa11.83□□□□□ -0.52
SMAD6-203ENST00000558937 AK3Q9UIJ7 227 aa11.83□□□□□ -0.52
SMAD6-203ENST00000558937 TRBV6-6A0A0A6YYG2 114 aa11.82□□□□□ -0.52
SMAD6-203ENST00000558937 CCL24O00175 119 aa11.82□□□□□ -0.52
SMAD6-203ENST00000558937 NBR2O15453 112 aa11.82□□□□□ -0.52
SMAD6-203ENST00000558937 ARL6IP5O75915 188 aa11.82□□□□□ -0.52
SMAD6-203ENST00000558937 IGHG4P01861 327 aa11.82□□□□□ -0.52
SMAD6-203ENST00000558937 IGF1P05019 195 aa11.82□□□□□ -0.52
SMAD6-203ENST00000558937 ARSBP15848 533 aa11.82□□□□□ -0.52
SMAD6-203ENST00000558937 CPEP16870 476 aa11.82□□□□□ -0.52
SMAD6-203ENST00000558937 PSMA1P25786 263 aaKnown RBP11.82□□□□□ -0.52
SMAD6-203ENST00000558937 MAP2K4P45985 399 aa11.82□□□□□ -0.52
SMAD6-203ENST00000558937 RAB11BQ15907 218 aa11.82□□□□□ -0.52
SMAD6-203ENST00000558937 FAM71F2Q6NXP2 309 aa11.82□□□□□ -0.52
SMAD6-203ENST00000558937 PRSS48Q7RTY5 328 aa11.82□□□□□ -0.52
SMAD6-203ENST00000558937 FAM89BQ8N5H3 189 aa11.82□□□□□ -0.52
SMAD6-203ENST00000558937 ZNF251Q9BRH9 671 aa11.82□□□□□ -0.52
SMAD6-203ENST00000558937 PARP12Q9H0J9 701 aaKnown RBP11.82□□□□□ -0.52
SMAD6-203ENST00000558937 FOXI3A8MTJ6 420 aaPredicted RBP11.81□□□□□ -0.52
SMAD6-203ENST00000558937 HLA-DRB1P01911 266 aa11.81□□□□□ -0.52
SMAD6-203ENST00000558937 OR5H8P0DN80 308 aa11.81□□□□□ -0.52
SMAD6-203ENST00000558937 CALRP27797 417 aaKnown RBP11.81□□□□□ -0.52
SMAD6-203ENST00000558937 CDX1P47902 265 aaPredicted RBP11.81□□□□□ -0.52
SMAD6-203ENST00000558937 CLDN12P56749 244 aa11.81□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms