RNA–Protein interactions for RNA: ENST00000558919.1

VPS13C-207, Transcript of vacuolar protein sorting 13 homolog C, humanhuman

TSL 5

Gene VPS13C, Length 566 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13C-207ENST00000558919 TBC1D28Q2M2D7 210 aa1.17□□□□□ -2.22
VPS13C-207ENST00000558919 HLA-DRB5Q30154 266 aa1.17□□□□□ -2.22
VPS13C-207ENST00000558919 SLC36A2Q495M3 483 aa1.17□□□□□ -2.22
VPS13C-207ENST00000558919 PCOTHQ58A44 107 aa1.17□□□□□ -2.22
VPS13C-207ENST00000558919 DNM1P34Q6PK57 102 aa1.17□□□□□ -2.22
VPS13C-207ENST00000558919 XKRXQ6PP77 449 aa1.17□□□□□ -2.22
VPS13C-207ENST00000558919 MTERF4Q7Z6M4 381 aaKnown RBP1.17□□□□□ -2.22
VPS13C-207ENST00000558919 LYPD6Q86Y78 171 aa1.17□□□□□ -2.22
VPS13C-207ENST00000558919 MUC15Q8N387 334 aa1.17□□□□□ -2.22
VPS13C-207ENST00000558919 KRTCAP2Q8N6L1 136 aa1.17□□□□□ -2.22
VPS13C-207ENST00000558919 OR52E4Q8NGH9 312 aa1.17□□□□□ -2.22
VPS13C-207ENST00000558919 KCTD4Q8WVF5 259 aa1.17□□□□□ -2.22
VPS13C-207ENST00000558919 RAD51AP1Q96B01 352 aa1.17□□□□□ -2.22
VPS13C-207ENST00000558919 SMIM19Q96E16 107 aa1.17□□□□□ -2.22
VPS13C-207ENST00000558919 TMEM208Q9BTX3 173 aa1.17□□□□□ -2.22
VPS13C-207ENST00000558919 TSSK6Q9BXA6 273 aa1.17□□□□□ -2.22
VPS13C-207ENST00000558919 CHST5Q9GZS9 411 aa1.17□□□□□ -2.22
VPS13C-207ENST00000558919 RPUSD1Q9UJJ7 312 aaKnown RBP1.17□□□□□ -2.22
VPS13C-207ENST00000558919 BTRCQ9Y297 605 aa1.17□□□□□ -2.22
VPS13C-207ENST00000558919 POLR3HQ9Y535 204 aaPredicted RBP1.17□□□□□ -2.22
VPS13C-207ENST00000558919 SNX10Q9Y5X0 201 aa1.17□□□□□ -2.22
VPS13C-207ENST00000558919 MTCH2Q9Y6C9 303 aa1.17□□□□□ -2.22
VPS13C-207ENST00000558919 ADCY9O60503 1353 aa1.17□□□□□ -2.22
VPS13C-207ENST00000558919 RAB3GAP2Q9H2M9 1393 aa1.17□□□□□ -2.22
VPS13C-207ENST00000558919 NUP153P49790 1475 aaKnown RBP1.17□□□□□ -2.22
VPS13C-207ENST00000558919 DNMT1P26358 1616 aaKnown RBP1.16□□□□□ -2.22
VPS13C-207ENST00000558919 TINCRA0A1B0GVN0 87 aa1.16□□□□□ -2.22
VPS13C-207ENST00000558919 METTL15A6NJ78 407 aa1.16□□□□□ -2.22
VPS13C-207ENST00000558919 LRRN3E7EW58 273 aa1.16□□□□□ -2.22
VPS13C-207ENST00000558919 H0Y980 276 aa1.16□□□□□ -2.22
VPS13C-207ENST00000558919 M0QZ92 97 aa1.16□□□□□ -2.22
VPS13C-207ENST00000558919 PFDN6O15212 129 aa1.16□□□□□ -2.22
VPS13C-207ENST00000558919 BIRC5O15392 142 aa1.16□□□□□ -2.22
VPS13C-207ENST00000558919 LTAP01374 205 aa1.16□□□□□ -2.22
VPS13C-207ENST00000558919 GYPCP04921 128 aa1.16□□□□□ -2.22
VPS13C-207ENST00000558919 COX5BP10606 129 aa1.16□□□□□ -2.22
VPS13C-207ENST00000558919 CFL1P23528 166 aaKnown RBP1.16□□□□□ -2.22
VPS13C-207ENST00000558919 S100A2P29034 98 aa1.16□□□□□ -2.22
VPS13C-207ENST00000558919 AGTR1P30556 359 aa1.16□□□□□ -2.22
VPS13C-207ENST00000558919 EVI2BP34910 448 aa1.16□□□□□ -2.22
VPS13C-207ENST00000558919 SULT1A2P50226 295 aa1.16□□□□□ -2.22
VPS13C-207ENST00000558919 MYL6P60660 151 aa1.16□□□□□ -2.22
VPS13C-207ENST00000558919 RAB2AP61019 212 aa1.16□□□□□ -2.22
VPS13C-207ENST00000558919 SMAGPQ0VAQ4 97 aa1.16□□□□□ -2.22
VPS13C-207ENST00000558919 SKP2Q13309 424 aa1.16□□□□□ -2.22
VPS13C-207ENST00000558919 C4orf26Q17RF5 130 aa1.16□□□□□ -2.22
VPS13C-207ENST00000558919 CENPWQ5EE01 88 aa1.16□□□□□ -2.22
VPS13C-207ENST00000558919 C10orf91Q5T1B1 145 aa1.16□□□□□ -2.22
VPS13C-207ENST00000558919 OGFRL1Q5TC84 451 aaPredicted RBP1.16□□□□□ -2.22
VPS13C-207ENST00000558919 FAM19A3Q7Z5A8 133 aa1.16□□□□□ -2.22
VPS13C-207ENST00000558919 Q8N402 240 aa1.16□□□□□ -2.22
VPS13C-207ENST00000558919 C2orf73Q8N5S3 287 aaPredicted RBP1.16□□□□□ -2.22
VPS13C-207ENST00000558919 TMEM156Q8N614 296 aa1.16□□□□□ -2.22
VPS13C-207ENST00000558919 OR11L1Q8NGX0 322 aa1.16□□□□□ -2.22
VPS13C-207ENST00000558919 OR4A5Q8NH83 315 aa1.16□□□□□ -2.22
VPS13C-207ENST00000558919 OR5K1Q8NHB7 308 aa1.16□□□□□ -2.22
VPS13C-207ENST00000558919 ERMNQ8TAM6 284 aa1.16□□□□□ -2.22
VPS13C-207ENST00000558919 CYGBQ8WWM9 190 aa1.16□□□□□ -2.22
VPS13C-207ENST00000558919 PACRGQ96M98 296 aaPredicted RBP1.16□□□□□ -2.22
VPS13C-207ENST00000558919 KCTD7Q96MP8 289 aa1.16□□□□□ -2.22
VPS13C-207ENST00000558919 POTEKPQ9BYX7 375 aa1.16□□□□□ -2.22
VPS13C-207ENST00000558919 SLC22A4Q9H015 551 aa1.16□□□□□ -2.22
VPS13C-207ENST00000558919 ARL6Q9H0F7 186 aa1.16□□□□□ -2.22
VPS13C-207ENST00000558919 ALX4Q9H161 411 aaPredicted RBP1.16□□□□□ -2.22
VPS13C-207ENST00000558919 TMEM216Q9P0N5 145 aa1.16□□□□□ -2.22
VPS13C-207ENST00000558919 GLS2Q9UI32 602 aa1.16□□□□□ -2.22
VPS13C-207ENST00000558919 TP53TG1Q9Y2A0 90 aa1.16□□□□□ -2.22
VPS13C-207ENST00000558919 ZNF337Q9Y3M9 751 aa1.16□□□□□ -2.22
VPS13C-207ENST00000558919 LINC00588Q9Y4M8 146 aa1.16□□□□□ -2.22
VPS13C-207ENST00000558919 PLXNA3P51805 1871 aa1.16□□□□□ -2.22
VPS13C-207ENST00000558919 TRPM6Q9BX84 2022 aa1.15□□□□□ -2.22
VPS13C-207ENST00000558919 ARGFXA6NJG6 315 aa1.15□□□□□ -2.23
VPS13C-207ENST00000558919 F5H5T6 163 aa1.15□□□□□ -2.23
VPS13C-207ENST00000558919 LECT2O14960 151 aa1.15□□□□□ -2.23
VPS13C-207ENST00000558919 AZIN1O14977 448 aa1.15□□□□□ -2.23
VPS13C-207ENST00000558919 DENRO43583 198 aaKnown RBP1.15□□□□□ -2.23
VPS13C-207ENST00000558919 ARL6IP5O75915 188 aa1.15□□□□□ -2.23
VPS13C-207ENST00000558919 HBZP02008 142 aa1.15□□□□□ -2.23
VPS13C-207ENST00000558919 LINC00614P0C842 121 aa1.15□□□□□ -2.23
VPS13C-207ENST00000558919 GADD45AP24522 165 aa1.15□□□□□ -2.23
VPS13C-207ENST00000558919 IFNGR2P38484 337 aa1.15□□□□□ -2.23
VPS13C-207ENST00000558919 CD79BP40259 229 aa1.15□□□□□ -2.23
VPS13C-207ENST00000558919 MGAT3Q09327 533 aa1.15□□□□□ -2.23
VPS13C-207ENST00000558919 MLLT11Q13015 90 aaPredicted RBP1.15□□□□□ -2.23
VPS13C-207ENST00000558919 C1DQ13901 141 aaKnown RBP1.15□□□□□ -2.23
VPS13C-207ENST00000558919 COQ5Q5HYK3 327 aa1.15□□□□□ -2.23
VPS13C-207ENST00000558919 HENMT1Q5T8I9 393 aaKnown RBP1.15□□□□□ -2.23
VPS13C-207ENST00000558919 CST9Q5W186 159 aa1.15□□□□□ -2.23
VPS13C-207ENST00000558919 TCF23Q7RTU1 214 aa1.15□□□□□ -2.23
VPS13C-207ENST00000558919 DCXRQ7Z4W1 244 aa1.15□□□□□ -2.23
VPS13C-207ENST00000558919 FAM19A5Q7Z5A7 132 aaPredicted RBP1.15□□□□□ -2.23
VPS13C-207ENST00000558919 ZBTB8OSQ8IWT0 167 aa1.15□□□□□ -2.23
VPS13C-207ENST00000558919 HS3ST5Q8IZT8 346 aa1.15□□□□□ -2.23
VPS13C-207ENST00000558919 RIBC1Q8N443 379 aaPredicted RBP1.15□□□□□ -2.23
VPS13C-207ENST00000558919 OR5D18Q8NGL1 313 aa1.15□□□□□ -2.23
VPS13C-207ENST00000558919 PIGXQ8TBF5 258 aa1.15□□□□□ -2.23
VPS13C-207ENST00000558919 SPPL2BQ8TCT7 592 aa1.15□□□□□ -2.23
VPS13C-207ENST00000558919 RNF133Q8WVZ7 376 aa1.15□□□□□ -2.23
VPS13C-207ENST00000558919 HIST1H2BAQ96A08 127 aa1.15□□□□□ -2.23
VPS13C-207ENST00000558919 TAMM41Q96BW9 452 aa1.15□□□□□ -2.23
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms