RNA–Protein interactions for RNA: ENST00000558649.5

RABGGTA-206, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 2

Gene RABGGTA, Length 768 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-206ENST00000558649 SCGNO76038 276 aa12.71□□□□□ -0.37
RABGGTA-206ENST00000558649 SCAND1P57086 179 aa12.71□□□□□ -0.37
RABGGTA-206ENST00000558649 ZNF816Q0VGE8 651 aaPredicted RBP12.71□□□□□ -0.37
RABGGTA-206ENST00000558649 ARSJQ5FYB0 599 aaPredicted RBP12.71□□□□□ -0.37
RABGGTA-206ENST00000558649 STEAP3Q658P3 488 aa12.71□□□□□ -0.37
RABGGTA-206ENST00000558649 OR8H3Q8N146 312 aa12.71□□□□□ -0.37
RABGGTA-206ENST00000558649 RTN4IP1Q8WWV3 396 aaPredicted RBP12.71□□□□□ -0.37
RABGGTA-206ENST00000558649 YPEL2Q96QA6 119 aa12.71□□□□□ -0.37
RABGGTA-206ENST00000558649 SLC25A33Q9BSK2 321 aa12.71□□□□□ -0.37
RABGGTA-206ENST00000558649 PARP12Q9H0J9 701 aaKnown RBP12.71□□□□□ -0.37
RABGGTA-206ENST00000558649 MMP24Q9Y5R2 645 aa12.71□□□□□ -0.37
RABGGTA-206ENST00000558649 A0A1B0GUS0 222 aa12.7□□□□□ -0.38
RABGGTA-206ENST00000558649 TRDCB7Z8K6 153 aa12.7□□□□□ -0.38
RABGGTA-206ENST00000558649 ST8SIA5O15466 376 aa12.7□□□□□ -0.38
RABGGTA-206ENST00000558649 TSPAN9O75954 239 aa12.7□□□□□ -0.38
RABGGTA-206ENST00000558649 GABARAPO95166 117 aa12.7□□□□□ -0.38
RABGGTA-206ENST00000558649 IGKV1D-33P01593 117 aa12.7□□□□□ -0.38
RABGGTA-206ENST00000558649 IGKV1-33P01594 117 aa12.7□□□□□ -0.38
RABGGTA-206ENST00000558649 TFAP2AP05549 437 aa12.7□□□□□ -0.38
RABGGTA-206ENST00000558649 LPLP06858 475 aa12.7□□□□□ -0.38
RABGGTA-206ENST00000558649 FAM106CPP0CH98 169 aa12.7□□□□□ -0.38
RABGGTA-206ENST00000558649 CEACAM6P40199 344 aa12.7□□□□□ -0.38
RABGGTA-206ENST00000558649 ALDH3B2P48448 385 aa12.7□□□□□ -0.38
RABGGTA-206ENST00000558649 GNG2P59768 71 aa12.7□□□□□ -0.38
RABGGTA-206ENST00000558649 HABP2Q14520 560 aaPredicted RBP12.7□□□□□ -0.38
RABGGTA-206ENST00000558649 HNF4GQ14541 408 aa12.7□□□□□ -0.38
RABGGTA-206ENST00000558649 ARL6IP1Q15041 203 aa12.7□□□□□ -0.38
RABGGTA-206ENST00000558649 ANKRD13BQ86YJ7 626 aa12.7□□□□□ -0.38
RABGGTA-206ENST00000558649 TGIF2LXQ8IUE1 241 aa12.7□□□□□ -0.38
RABGGTA-206ENST00000558649 NUDCD2Q8WVJ2 157 aa12.7□□□□□ -0.38
RABGGTA-206ENST00000558649 CFHR4Q92496 578 aa12.7□□□□□ -0.38
RABGGTA-206ENST00000558649 SLC25A46Q96AG3 418 aa12.7□□□□□ -0.38
RABGGTA-206ENST00000558649 C16orf95Q9H693 158 aa12.7□□□□□ -0.38
RABGGTA-206ENST00000558649 SPATA2Q9UM82 520 aa12.7□□□□□ -0.38
RABGGTA-206ENST00000558649 STAB1Q9NY15 2570 aa12.69□□□□□ -0.38
RABGGTA-206ENST00000558649 TRAV18A0A075B6X5 111 aa12.69□□□□□ -0.38
RABGGTA-206ENST00000558649 POM121CA8CG34 1229 aa12.69□□□□□ -0.38
RABGGTA-206ENST00000558649 BET1O15155 118 aa12.69□□□□□ -0.38
RABGGTA-206ENST00000558649 FABP7O15540 132 aa12.69□□□□□ -0.38
RABGGTA-206ENST00000558649 TMEM11P17152 192 aa12.69□□□□□ -0.38
RABGGTA-206ENST00000558649 ZBTB25P24278 435 aa12.69□□□□□ -0.38
RABGGTA-206ENST00000558649 KIR2DS4P43632 304 aa12.69□□□□□ -0.38
RABGGTA-206ENST00000558649 OR3A3P47888 321 aa12.69□□□□□ -0.38
RABGGTA-206ENST00000558649 SRSF4Q08170 494 aaKnown RBP12.69□□□□□ -0.38
RABGGTA-206ENST00000558649 KIR2DS1Q14954 304 aa12.69□□□□□ -0.38
RABGGTA-206ENST00000558649 CTF1Q16619 201 aa12.69□□□□□ -0.38
RABGGTA-206ENST00000558649 UBE2NLQ5JXB2 153 aa12.69□□□□□ -0.38
RABGGTA-206ENST00000558649 HACD4Q5VWC8 232 aa12.69□□□□□ -0.38
RABGGTA-206ENST00000558649 SAMD12Q8N8I0 201 aa12.69□□□□□ -0.38
RABGGTA-206ENST00000558649 DTX3Q8N9I9 347 aa12.69□□□□□ -0.38
RABGGTA-206ENST00000558649 OR2T6Q8NHC8 308 aa12.69□□□□□ -0.38
RABGGTA-206ENST00000558649 WFDC12Q8WWY7 111 aa12.69□□□□□ -0.38
RABGGTA-206ENST00000558649 ST6GALNAC6Q969X2 333 aa12.69□□□□□ -0.38
RABGGTA-206ENST00000558649 RBMXL1Q96E39 390 aaKnown RBP12.69□□□□□ -0.38
RABGGTA-206ENST00000558649 ZNF747Q9BV97 191 aa12.69□□□□□ -0.38
RABGGTA-206ENST00000558649 RANBP3Q9H6Z4 567 aaPredicted RBP12.69□□□□□ -0.38
RABGGTA-206ENST00000558649 SAA2-SAA4A0A096LPE2 208 aa12.68□□□□□ -0.38
RABGGTA-206ENST00000558649 IGKV1-6A0A0C4DH72 117 aa12.68□□□□□ -0.38
RABGGTA-206ENST00000558649 GSTP1P09211 210 aaKnown RBP12.68□□□□□ -0.38
RABGGTA-206ENST00000558649 GSTT2P0CG29 244 aa12.68□□□□□ -0.38
RABGGTA-206ENST00000558649 GSTT2BP0CG30 244 aa12.68□□□□□ -0.38
RABGGTA-206ENST00000558649 SAA2P0DJI9 122 aaPredicted RBP12.68□□□□□ -0.38
RABGGTA-206ENST00000558649 BLCAPP62952 87 aa12.68□□□□□ -0.38
RABGGTA-206ENST00000558649 HERPUD1Q15011 391 aa12.68□□□□□ -0.38
RABGGTA-206ENST00000558649 ZNF260Q3ZCT1 412 aa12.68□□□□□ -0.38
RABGGTA-206ENST00000558649 IGSF11Q5DX21 431 aa12.68□□□□□ -0.38
RABGGTA-206ENST00000558649 CLVS1Q8IUQ0 354 aaPredicted RBP12.68□□□□□ -0.38
RABGGTA-206ENST00000558649 OR4A4PQ8NGN8 299 aa12.68□□□□□ -0.38
RABGGTA-206ENST00000558649 AKR1E2Q96JD6 320 aa12.68□□□□□ -0.38
RABGGTA-206ENST00000558649 RBM14Q96PK6 669 aaKnown RBP12.68□□□□□ -0.38
RABGGTA-206ENST00000558649 ST6GALNAC5Q9BVH7 336 aa12.68□□□□□ -0.38
RABGGTA-206ENST00000558649 IFI27L2Q9H2X8 130 aa12.68□□□□□ -0.38
RABGGTA-206ENST00000558649 ZNF702PQ9H963 129 aa12.68□□□□□ -0.38
RABGGTA-206ENST00000558649 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP12.68□□□□□ -0.38
RABGGTA-206ENST00000558649 DIABLOQ9NR28 239 aa12.68□□□□□ -0.38
RABGGTA-206ENST00000558649 COMMD3Q9UBI1 195 aa12.68□□□□□ -0.38
RABGGTA-206ENST00000558649 TENM1Q9UKZ4 2725 aa12.68□□□□□ -0.38
RABGGTA-206ENST00000558649 SH2D7A6NKC9 451 aaPredicted RBP12.67□□□□□ -0.38
RABGGTA-206ENST00000558649 TXNL1O43396 289 aa12.67□□□□□ -0.38
RABGGTA-206ENST00000558649 TMEM127O75204 238 aa12.67□□□□□ -0.38
RABGGTA-206ENST00000558649 OR2F2O95006 317 aa12.67□□□□□ -0.38
RABGGTA-206ENST00000558649 ZNF137PP52743 207 aa12.67□□□□□ -0.38
RABGGTA-206ENST00000558649 ABCA11PQ4W5N1 156 aa12.67□□□□□ -0.38
RABGGTA-206ENST00000558649 C9orf152Q5JTZ5 239 aa12.67□□□□□ -0.38
RABGGTA-206ENST00000558649 SHISA2Q6UWI4 295 aa12.67□□□□□ -0.38
RABGGTA-206ENST00000558649 Q6ZS46 218 aa12.67□□□□□ -0.38
RABGGTA-206ENST00000558649 C16orf82Q7Z2V1 217 aa12.67□□□□□ -0.38
RABGGTA-206ENST00000558649 ODF3L1Q8IXM7 274 aa12.67□□□□□ -0.38
RABGGTA-206ENST00000558649 ABHD14BQ96IU4 210 aa12.67□□□□□ -0.38
RABGGTA-206ENST00000558649 MRPL20Q9BYC9 149 aaKnown RBP12.67□□□□□ -0.38
RABGGTA-206ENST00000558649 PRSS22Q9GZN4 317 aa12.67□□□□□ -0.38
RABGGTA-206ENST00000558649 DCSTAMPQ9H295 470 aa12.67□□□□□ -0.38
RABGGTA-206ENST00000558649 RDH8Q9NYR8 311 aa12.67□□□□□ -0.38
RABGGTA-206ENST00000558649 IGKV1D-8A0A087WSZ0 117 aa12.66□□□□□ -0.38
RABGGTA-206ENST00000558649 FAM90A9PA6NNJ1 464 aa12.66□□□□□ -0.38
RABGGTA-206ENST00000558649 ZNF736B4DX44 427 aaPredicted RBP12.66□□□□□ -0.38
RABGGTA-206ENST00000558649 LANCL1O43813 399 aa12.66□□□□□ -0.38
RABGGTA-206ENST00000558649 SSX5O60225 188 aa12.66□□□□□ -0.38
RABGGTA-206ENST00000558649 VSIG10L2P0DP72 767 aa12.66□□□□□ -0.38
RABGGTA-206ENST00000558649 PTHLHP12272 177 aa12.66□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms