RNA–Protein interactions for RNA: ENST00000558471.5

LRRC28-206, Transcript of leucine rich repeat containing 28, humanhuman

TSL 3

Gene LRRC28, Length 793 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-206ENST00000558471 CHST1O43916 411 aa10.03□□□□□ -0.8
LRRC28-206ENST00000558471 SSX5O60225 188 aa10.03□□□□□ -0.8
LRRC28-206ENST00000558471 RGS11O94810 467 aa10.03□□□□□ -0.8
LRRC28-206ENST00000558471 GAPDHP04406 335 aaKnown RBP10.03□□□□□ -0.8
LRRC28-206ENST00000558471 ZNF182P17025 639 aaPredicted RBP10.03□□□□□ -0.8
LRRC28-206ENST00000558471 ZBTB25P24278 435 aa10.03□□□□□ -0.8
LRRC28-206ENST00000558471 CEACAM6P40199 344 aa10.03□□□□□ -0.8
LRRC28-206ENST00000558471 MNDAP41218 407 aa10.03□□□□□ -0.8
LRRC28-206ENST00000558471 REG1BP48304 166 aa10.03□□□□□ -0.8
LRRC28-206ENST00000558471 COMPP49747 757 aaPredicted RBP10.03□□□□□ -0.8
LRRC28-206ENST00000558471 RAB7AP51149 207 aa10.03□□□□□ -0.8
LRRC28-206ENST00000558471 GNG2P59768 71 aa10.03□□□□□ -0.8
LRRC28-206ENST00000558471 PITPNAQ00169 270 aa10.03□□□□□ -0.8
LRRC28-206ENST00000558471 ZNF816Q0VGE8 651 aaPredicted RBP10.03□□□□□ -0.8
LRRC28-206ENST00000558471 FOXL1Q12952 345 aa10.03□□□□□ -0.8
LRRC28-206ENST00000558471 HERPUD1Q15011 391 aa10.03□□□□□ -0.8
LRRC28-206ENST00000558471 SRSF7Q16629 238 aaKnown RBP eCLIP10.03□□□□□ -0.8
LRRC28-206ENST00000558471 FBLN7Q53RD9 439 aa10.03□□□□□ -0.8
LRRC28-206ENST00000558471 AWAT1Q58HT5 328 aa10.03□□□□□ -0.8
LRRC28-206ENST00000558471 DHRS7BQ6IAN0 325 aaPredicted RBP10.03□□□□□ -0.8
LRRC28-206ENST00000558471 CCDC144NLQ6NUI1 221 aa10.03□□□□□ -0.8
LRRC28-206ENST00000558471 TMEM219Q86XT9 240 aa10.03□□□□□ -0.8
LRRC28-206ENST00000558471 LYG1Q8N1E2 194 aa10.03□□□□□ -0.8
LRRC28-206ENST00000558471 ACOT12Q8WYK0 555 aa10.03□□□□□ -0.8
LRRC28-206ENST00000558471 ABHD14AQ9BUJ0 271 aa10.03□□□□□ -0.8
LRRC28-206ENST00000558471 ST6GALNAC5Q9BVH7 336 aa10.03□□□□□ -0.8
LRRC28-206ENST00000558471 PARP12Q9H0J9 701 aaKnown RBP10.03□□□□□ -0.8
LRRC28-206ENST00000558471 AUNIPQ9H7T9 357 aa10.03□□□□□ -0.8
LRRC28-206ENST00000558471 SLC23A1Q9UHI7 598 aa10.03□□□□□ -0.8
LRRC28-206ENST00000558471 IGHV1-3A0A0C4DH29 117 aa10.02□□□□□ -0.81
LRRC28-206ENST00000558471 FAM90A9PA6NNJ1 464 aa10.02□□□□□ -0.81
LRRC28-206ENST00000558471 TIMM23O14925 209 aa10.02□□□□□ -0.81
LRRC28-206ENST00000558471 ST8SIA5O15466 376 aa10.02□□□□□ -0.81
LRRC28-206ENST00000558471 HSPA12AO43301 675 aa10.02□□□□□ -0.81
LRRC28-206ENST00000558471 XRCC3O43542 346 aa10.02□□□□□ -0.81
LRRC28-206ENST00000558471 NDUFA7O95182 113 aa10.02□□□□□ -0.81
LRRC28-206ENST00000558471 EIF4EP06730 217 aaKnown RBP10.02□□□□□ -0.81
LRRC28-206ENST00000558471 PTHLHP12272 177 aa10.02□□□□□ -0.81
LRRC28-206ENST00000558471 MDKP21741 143 aaPredicted RBP10.02□□□□□ -0.81
LRRC28-206ENST00000558471 DTYMKP23919 212 aa10.02□□□□□ -0.81
LRRC28-206ENST00000558471 IL3RAP26951 378 aa10.02□□□□□ -0.81
LRRC28-206ENST00000558471 KIR2DS4P43632 304 aa10.02□□□□□ -0.81
LRRC28-206ENST00000558471 ARHGDIBP52566 201 aa10.02□□□□□ -0.81
LRRC28-206ENST00000558471 ZNF137PP52743 207 aa10.02□□□□□ -0.81
LRRC28-206ENST00000558471 RAG2P55895 527 aa10.02□□□□□ -0.81
LRRC28-206ENST00000558471 KIR2DS1Q14954 304 aa10.02□□□□□ -0.81
LRRC28-206ENST00000558471 IGSF11Q5DX21 431 aa10.02□□□□□ -0.81
LRRC28-206ENST00000558471 Q6ZS49 121 aa10.02□□□□□ -0.81
LRRC28-206ENST00000558471 Q6ZSV7 163 aa10.02□□□□□ -0.81
LRRC28-206ENST00000558471 MOB3BQ86TA1 216 aa10.02□□□□□ -0.81
LRRC28-206ENST00000558471 ODF3L1Q8IXM7 274 aa10.02□□□□□ -0.81
LRRC28-206ENST00000558471 OR8H3Q8N146 312 aa10.02□□□□□ -0.81
LRRC28-206ENST00000558471 DRAM1Q8N682 238 aa10.02□□□□□ -0.81
LRRC28-206ENST00000558471 OR2AK2Q8NG84 335 aa10.02□□□□□ -0.81
LRRC28-206ENST00000558471 OR4A4PQ8NGN8 299 aa10.02□□□□□ -0.81
LRRC28-206ENST00000558471 OR56B4Q8NH76 319 aa10.02□□□□□ -0.81
LRRC28-206ENST00000558471 CAPSLQ8WWF8 208 aa10.02□□□□□ -0.81
LRRC28-206ENST00000558471 RTN4IP1Q8WWV3 396 aaPredicted RBP10.02□□□□□ -0.81
LRRC28-206ENST00000558471 CFHR4Q92496 578 aa10.02□□□□□ -0.81
LRRC28-206ENST00000558471 CMTM3Q96MX0 182 aa10.02□□□□□ -0.81
LRRC28-206ENST00000558471 BCL7BQ9BQE9 202 aa10.02□□□□□ -0.81
LRRC28-206ENST00000558471 C11orf54Q9H0W9 315 aaPredicted RBP10.02□□□□□ -0.81
LRRC28-206ENST00000558471 PITPNC1Q9UKF7 332 aa10.02□□□□□ -0.81
LRRC28-206ENST00000558471 CEPT1Q9Y6K0 416 aa10.02□□□□□ -0.81
LRRC28-206ENST00000558471 STAB1Q9NY15 2570 aa10.01□□□□□ -0.81
LRRC28-206ENST00000558471 BET1O15155 118 aa10.01□□□□□ -0.81
LRRC28-206ENST00000558471 HPGDSO60760 199 aa10.01□□□□□ -0.81
LRRC28-206ENST00000558471 APOA1P02647 267 aa10.01□□□□□ -0.81
LRRC28-206ENST00000558471 HABP2Q14520 560 aaPredicted RBP10.01□□□□□ -0.81
LRRC28-206ENST00000558471 C12orf54Q6X4T0 127 aa10.01□□□□□ -0.81
LRRC28-206ENST00000558471 LIAT1Q6ZQX7 453 aa10.01□□□□□ -0.81
LRRC28-206ENST00000558471 THNSL2Q86YJ6 484 aa10.01□□□□□ -0.81
LRRC28-206ENST00000558471 OR4F5Q8NH21 305 aa10.01□□□□□ -0.81
LRRC28-206ENST00000558471 AGMATQ9BSE5 352 aa10.01□□□□□ -0.81
LRRC28-206ENST00000558471 CABLES2Q9BTV7 478 aa10.01□□□□□ -0.81
LRRC28-206ENST00000558471 IFI27L2Q9H2X8 130 aa10.01□□□□□ -0.81
LRRC28-206ENST00000558471 RAB18Q9NP72 206 aa10.01□□□□□ -0.81
LRRC28-206ENST00000558471 RDH8Q9NYR8 311 aa10.01□□□□□ -0.81
LRRC28-206ENST00000558471 TRBV6-7A0A0A0MS04 114 aa10□□□□□ -0.81
LRRC28-206ENST00000558471 IGHV3-72A0A0B4J1Y9 119 aa10□□□□□ -0.81
LRRC28-206ENST00000558471 H3BMQ9 156 aa10□□□□□ -0.81
LRRC28-206ENST00000558471 ITGB1BP1O14713 200 aa10□□□□□ -0.81
LRRC28-206ENST00000558471 LANCL1O43813 399 aa10□□□□□ -0.81
LRRC28-206ENST00000558471 TSPAN9O75954 239 aa10□□□□□ -0.81
LRRC28-206ENST00000558471 SNRNP70P08621 437 aaKnown RBP10□□□□□ -0.81
LRRC28-206ENST00000558471 FAM106CPP0CH98 169 aa10□□□□□ -0.81
LRRC28-206ENST00000558471 ELK1P19419 428 aa10□□□□□ -0.81
LRRC28-206ENST00000558471 OR3A3P47888 321 aa10□□□□□ -0.81
LRRC28-206ENST00000558471 TAS2R20P59543 309 aa10□□□□□ -0.81
LRRC28-206ENST00000558471 TMEM69Q5SWH9 247 aa10□□□□□ -0.81
LRRC28-206ENST00000558471 MZT2AQ6P582 158 aa10□□□□□ -0.81
LRRC28-206ENST00000558471 TGIF2LXQ8IUE1 241 aa10□□□□□ -0.81
LRRC28-206ENST00000558471 GVQW1Q8N7I0 195 aa10□□□□□ -0.81
LRRC28-206ENST00000558471 OR10J5Q8NHC4 309 aa10□□□□□ -0.81
LRRC28-206ENST00000558471 LINC01006Q8NI28 216 aa10□□□□□ -0.81
LRRC28-206ENST00000558471 DYNC2LI1Q8TCX1 351 aa10□□□□□ -0.81
LRRC28-206ENST00000558471 EDARADDQ8WWZ3 215 aa10□□□□□ -0.81
LRRC28-206ENST00000558471 AP3S1Q92572 193 aa10□□□□□ -0.81
LRRC28-206ENST00000558471 ISOC1Q96CN7 298 aa10□□□□□ -0.81
LRRC28-206ENST00000558471 RBMXL1Q96E39 390 aaKnown RBP10□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 67.7 ms