RNA–Protein interactions for RNA: ENST00000558324.1

HERC1-202, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 5

Gene HERC1, Length 828 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-202ENST00000558324 LINC00482Q8N8I6 264 aa9.39□□□□□ -0.91
HERC1-202ENST00000558324 OR2AK2Q8NG84 335 aa9.39□□□□□ -0.91
HERC1-202ENST00000558324 OR51D1Q8NGF3 324 aa9.39□□□□□ -0.91
HERC1-202ENST00000558324 GALMQ96C23 342 aa9.39□□□□□ -0.91
HERC1-202ENST00000558324 CNBD2Q96M20 576 aa9.39□□□□□ -0.91
HERC1-202ENST00000558324 DUX3Q96PT4 197 aa9.39□□□□□ -0.91
HERC1-202ENST00000558324 GFI1Q99684 422 aa9.39□□□□□ -0.91
HERC1-202ENST00000558324 HSPB9Q9BQS6 159 aa9.39□□□□□ -0.91
HERC1-202ENST00000558324 TM2D1Q9BX74 207 aa9.39□□□□□ -0.91
HERC1-202ENST00000558324 PLEKHJ1Q9NW61 149 aa9.39□□□□□ -0.91
HERC1-202ENST00000558324 ABRACLQ9P1F3 81 aa9.39□□□□□ -0.91
HERC1-202ENST00000558324 SAA2-SAA4A0A096LPE2 208 aa9.38□□□□□ -0.91
HERC1-202ENST00000558324 ST8SIA5O15466 376 aa9.38□□□□□ -0.91
HERC1-202ENST00000558324 SOCS1O15524 211 aa9.38□□□□□ -0.91
HERC1-202ENST00000558324 ARL6IP5O75915 188 aa9.38□□□□□ -0.91
HERC1-202ENST00000558324 RGS11O94810 467 aa9.38□□□□□ -0.91
HERC1-202ENST00000558324 RPLP1P05386 114 aaKnown RBP9.38□□□□□ -0.91
HERC1-202ENST00000558324 SAA2P0DJI9 122 aaPredicted RBP9.38□□□□□ -0.91
HERC1-202ENST00000558324 ARSBP15848 533 aa9.38□□□□□ -0.91
HERC1-202ENST00000558324 CALRP27797 417 aaKnown RBP9.38□□□□□ -0.91
HERC1-202ENST00000558324 HOXD3P31249 432 aaPredicted RBP9.38□□□□□ -0.91
HERC1-202ENST00000558324 SOX6P35712 828 aa9.38□□□□□ -0.91
HERC1-202ENST00000558324 CLDN12P56749 244 aa9.38□□□□□ -0.91
HERC1-202ENST00000558324 RAB25P57735 213 aa9.38□□□□□ -0.91
HERC1-202ENST00000558324 QRFPP83859 136 aa9.38□□□□□ -0.91
HERC1-202ENST00000558324 HTD2P86397 168 aa9.38□□□□□ -0.91
HERC1-202ENST00000558324 FABP5Q01469 135 aa9.38□□□□□ -0.91
HERC1-202ENST00000558324 TPBGQ13641 420 aa9.38□□□□□ -0.91
HERC1-202ENST00000558324 RAB11BQ15907 218 aa9.38□□□□□ -0.91
HERC1-202ENST00000558324 STEAP3Q658P3 488 aa9.38□□□□□ -0.91
HERC1-202ENST00000558324 MRPL41Q8IXM3 137 aaKnown RBP9.38□□□□□ -0.91
HERC1-202ENST00000558324 ODF3L1Q8IXM7 274 aa9.38□□□□□ -0.91
HERC1-202ENST00000558324 FAM71E2Q8N5Q1 922 aa9.38□□□□□ -0.91
HERC1-202ENST00000558324 OR8H1Q8NGG4 311 aa9.38□□□□□ -0.91
HERC1-202ENST00000558324 RCC1LQ96I51 464 aaKnown RBP9.38□□□□□ -0.91
HERC1-202ENST00000558324 MGLLQ99685 303 aa9.38□□□□□ -0.91
HERC1-202ENST00000558324 HDHD3Q9BSH5 251 aaPredicted RBP9.38□□□□□ -0.91
HERC1-202ENST00000558324 LPAR5Q9H1C0 372 aa9.38□□□□□ -0.91
HERC1-202ENST00000558324 VCX3BQ9H321 246 aa9.38□□□□□ -0.91
HERC1-202ENST00000558324 AK3Q9UIJ7 227 aa9.38□□□□□ -0.91
HERC1-202ENST00000558324 SLC17A2O00624 439 aa9.37□□□□□ -0.91
HERC1-202ENST00000558324 RRP9O43818 475 aaKnown RBP9.37□□□□□ -0.91
HERC1-202ENST00000558324 YPEL1O60688 119 aa9.37□□□□□ -0.91
HERC1-202ENST00000558324 NAPSAO96009 420 aa9.37□□□□□ -0.91
HERC1-202ENST00000558324 CPEP16870 476 aa9.37□□□□□ -0.91
HERC1-202ENST00000558324 VDAC1P21796 283 aa9.37□□□□□ -0.91
HERC1-202ENST00000558324 CNTFRP26992 372 aa9.37□□□□□ -0.91
HERC1-202ENST00000558324 THBS3P49746 956 aa9.37□□□□□ -0.91
HERC1-202ENST00000558324 ACTBP60709 375 aa9.37□□□□□ -0.91
HERC1-202ENST00000558324 TRAM1Q15629 374 aa9.37□□□□□ -0.91
HERC1-202ENST00000558324 PNLIPRP3Q17RR3 467 aa9.37□□□□□ -0.91
HERC1-202ENST00000558324 DEFB136Q30KP8 78 aa9.37□□□□□ -0.91
HERC1-202ENST00000558324 CXorf66Q5JRM2 361 aaPredicted RBP9.37□□□□□ -0.91
HERC1-202ENST00000558324 TEX38Q6PEX7 206 aa9.37□□□□□ -0.91
HERC1-202ENST00000558324 PRSS48Q7RTY5 328 aa9.37□□□□□ -0.91
HERC1-202ENST00000558324 ZNF695Q8IW36 515 aa9.37□□□□□ -0.91
HERC1-202ENST00000558324 COMMD1Q8N668 190 aa9.37□□□□□ -0.91
HERC1-202ENST00000558324 RITA1Q96K30 269 aa9.37□□□□□ -0.91
HERC1-202ENST00000558324 YPEL2Q96QA6 119 aa9.37□□□□□ -0.91
HERC1-202ENST00000558324 NABP2Q9BQ15 211 aa9.37□□□□□ -0.91
HERC1-202ENST00000558324 URM1Q9BTM9 101 aaKnown RBP9.37□□□□□ -0.91
HERC1-202ENST00000558324 PARP12Q9H0J9 701 aaKnown RBP9.37□□□□□ -0.91
HERC1-202ENST00000558324 IFI27L2Q9H2X8 130 aa9.37□□□□□ -0.91
HERC1-202ENST00000558324 ZFP57Q9NU63 452 aa9.37□□□□□ -0.91
HERC1-202ENST00000558324 STEAP1Q9UHE8 339 aa9.37□□□□□ -0.91
HERC1-202ENST00000558324 ZNF107Q9UII5 783 aaPredicted RBP9.37□□□□□ -0.91
HERC1-202ENST00000558324 CD37P11049 281 aa9.36□□□□□ -0.91
HERC1-202ENST00000558324 PSMA1P25786 263 aaKnown RBP9.36□□□□□ -0.91
HERC1-202ENST00000558324 HSPA13P48723 471 aa9.36□□□□□ -0.91
HERC1-202ENST00000558324 VEGFCP49767 419 aa9.36□□□□□ -0.91
HERC1-202ENST00000558324 RPL39P5Q59GN2 51 aa9.36□□□□□ -0.91
HERC1-202ENST00000558324 HES5Q5TA89 166 aa9.36□□□□□ -0.91
HERC1-202ENST00000558324 FAM131AQ6UXB0 335 aa9.36□□□□□ -0.91
HERC1-202ENST00000558324 ZNF833PQ6ZTB9 187 aa9.36□□□□□ -0.91
HERC1-202ENST00000558324 MOB1BQ7L9L4 216 aa9.36□□□□□ -0.91
HERC1-202ENST00000558324 ARHGAP5-AS1Q96IT6 56 aa9.36□□□□□ -0.91
HERC1-202ENST00000558324 ZNF251Q9BRH9 671 aa9.36□□□□□ -0.91
HERC1-202ENST00000558324 GON7Q9BXV9 100 aa9.36□□□□□ -0.91
HERC1-202ENST00000558324 ISYNA1Q9NPH2 558 aa9.36□□□□□ -0.91
HERC1-202ENST00000558324 OR1A1Q9P1Q5 309 aa9.36□□□□□ -0.91
HERC1-202ENST00000558324 SLC23A1Q9UHI7 598 aa9.36□□□□□ -0.91
HERC1-202ENST00000558324 LRRC42Q9Y546 428 aa9.36□□□□□ -0.91
HERC1-202ENST00000558324 NBR2O15453 112 aa9.35□□□□□ -0.91
HERC1-202ENST00000558324 DUS4LO95620 317 aaKnown RBP9.35□□□□□ -0.91
HERC1-202ENST00000558324 MYCNOSP40205 109 aa9.35□□□□□ -0.91
HERC1-202ENST00000558324 KRTAP10-11P60412 298 aa9.35□□□□□ -0.91
HERC1-202ENST00000558324 HLA-DRB3P79483 266 aa9.35□□□□□ -0.91
HERC1-202ENST00000558324 PLA2G7Q13093 441 aa9.35□□□□□ -0.91
HERC1-202ENST00000558324 FOXE3Q13461 319 aa9.35□□□□□ -0.91
HERC1-202ENST00000558324 TBCEQ15813 527 aaPredicted RBP9.35□□□□□ -0.91
HERC1-202ENST00000558324 ZNF880Q6PDB4 577 aa9.35□□□□□ -0.91
HERC1-202ENST00000558324 GLDNQ6ZMI3 551 aaPredicted RBP9.35□□□□□ -0.91
HERC1-202ENST00000558324 ZNF367Q7RTV3 350 aa9.35□□□□□ -0.91
HERC1-202ENST00000558324 DPF1Q92782 380 aa9.35□□□□□ -0.91
HERC1-202ENST00000558324 FAM3DQ96BQ1 224 aa9.35□□□□□ -0.91
HERC1-202ENST00000558324 RAX2Q96IS3 184 aa9.35□□□□□ -0.91
HERC1-202ENST00000558324 ABHD14BQ96IU4 210 aa9.35□□□□□ -0.91
HERC1-202ENST00000558324 KCTD7Q96MP8 289 aa9.35□□□□□ -0.91
HERC1-202ENST00000558324 ACOT13Q9NPJ3 140 aa9.35□□□□□ -0.91
HERC1-202ENST00000558324 C12orf4Q9NQ89 552 aa9.35□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms