RNA–Protein interactions for RNA: ENST00000558138.1

SPG11-207, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

APPRIS ALT2 TSL 5

Gene SPG11, Length 750 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-207ENST00000558138 IZUMO1Q8IYV9 350 aa7.22□□□□□ -1.25
SPG11-207ENST00000558138 GAPTQ8N292 157 aa7.22□□□□□ -1.25
SPG11-207ENST00000558138 LINC00311Q8N616 119 aa7.22□□□□□ -1.25
SPG11-207ENST00000558138 OR13F1Q8NGS4 319 aa7.22□□□□□ -1.25
SPG11-207ENST00000558138 LINC01006Q8NI28 216 aa7.22□□□□□ -1.25
SPG11-207ENST00000558138 EDARADDQ8WWZ3 215 aa7.22□□□□□ -1.25
SPG11-207ENST00000558138 MAFIPQ8WZ33 124 aa7.22□□□□□ -1.25
SPG11-207ENST00000558138 ZNF747Q9BV97 191 aa7.22□□□□□ -1.25
SPG11-207ENST00000558138 ST6GALNAC5Q9BVH7 336 aa7.22□□□□□ -1.25
SPG11-207ENST00000558138 Q9N2K0 584 aa7.22□□□□□ -1.25
SPG11-207ENST00000558138 DIABLOQ9NR28 239 aa7.22□□□□□ -1.25
SPG11-207ENST00000558138 SIGLEC9Q9Y336 463 aa7.22□□□□□ -1.25
SPG11-207ENST00000558138 MOB4Q9Y3A3 225 aa7.22□□□□□ -1.25
SPG11-207ENST00000558138 TRAV18A0A075B6X5 111 aa7.21□□□□□ -1.26
SPG11-207ENST00000558138 TRBV6-6A0A0A6YYG2 114 aa7.21□□□□□ -1.26
SPG11-207ENST00000558138 IGHV1-3A0A0C4DH29 117 aa7.21□□□□□ -1.26
SPG11-207ENST00000558138 A0A1W2PPI3 338 aa7.21□□□□□ -1.26
SPG11-207ENST00000558138 TMEM235A6NFC5 223 aa7.21□□□□□ -1.26
SPG11-207ENST00000558138 NCBP2LA6PVI3 153 aaKnown RBP7.21□□□□□ -1.26
SPG11-207ENST00000558138 FOXI3A8MTJ6 420 aaPredicted RBP7.21□□□□□ -1.26
SPG11-207ENST00000558138 LY6LH3BQJ8 138 aa7.21□□□□□ -1.26
SPG11-207ENST00000558138 RAB27BO00194 218 aa7.21□□□□□ -1.26
SPG11-207ENST00000558138 MFNGO00587 321 aa7.21□□□□□ -1.26
SPG11-207ENST00000558138 FABP7O15540 132 aa7.21□□□□□ -1.26
SPG11-207ENST00000558138 YPEL1O60688 119 aa7.21□□□□□ -1.26
SPG11-207ENST00000558138 OR2F2O95006 317 aa7.21□□□□□ -1.26
SPG11-207ENST00000558138 RPS19P39019 145 aaKnown RBP7.21□□□□□ -1.26
SPG11-207ENST00000558138 SCAND1P57086 179 aa7.21□□□□□ -1.26
SPG11-207ENST00000558138 NCS1P62166 190 aa7.21□□□□□ -1.26
SPG11-207ENST00000558138 PITPNAQ00169 270 aa7.21□□□□□ -1.26
SPG11-207ENST00000558138 ZNF816Q0VGE8 651 aaPredicted RBP7.21□□□□□ -1.26
SPG11-207ENST00000558138 CT45A1Q5HYN5 189 aa7.21□□□□□ -1.26
SPG11-207ENST00000558138 CCBE1Q6UXH8 406 aaPredicted RBP7.21□□□□□ -1.26
SPG11-207ENST00000558138 SLC25A48Q6ZT89 311 aaKnown RBP7.21□□□□□ -1.26
SPG11-207ENST00000558138 C8orf31Q8N9H6 132 aa7.21□□□□□ -1.26
SPG11-207ENST00000558138 OR4A4PQ8NGN8 299 aa7.21□□□□□ -1.26
SPG11-207ENST00000558138 OR5H6Q8NGV6 325 aa7.21□□□□□ -1.26
SPG11-207ENST00000558138 OR2T10Q8NGZ9 312 aa7.21□□□□□ -1.26
SPG11-207ENST00000558138 OR10J5Q8NHC4 309 aa7.21□□□□□ -1.26
SPG11-207ENST00000558138 CT45A3Q8NHU0 189 aa7.21□□□□□ -1.26
SPG11-207ENST00000558138 PIFOQ8TCI5 191 aa7.21□□□□□ -1.26
SPG11-207ENST00000558138 RTN4IP1Q8WWV3 396 aaPredicted RBP7.21□□□□□ -1.26
SPG11-207ENST00000558138 RBM14Q96PK6 669 aaKnown RBP7.21□□□□□ -1.26
SPG11-207ENST00000558138 YPEL2Q96QA6 119 aa7.21□□□□□ -1.26
SPG11-207ENST00000558138 S1PR3Q99500 378 aa7.21□□□□□ -1.26
SPG11-207ENST00000558138 C16orf95Q9H693 158 aa7.21□□□□□ -1.26
SPG11-207ENST00000558138 OR1A1Q9P1Q5 309 aa7.21□□□□□ -1.26
SPG11-207ENST00000558138 ZNF230Q9UIE0 474 aaPredicted RBP7.21□□□□□ -1.26
SPG11-207ENST00000558138 ZNF221Q9UK13 617 aa7.21□□□□□ -1.26
SPG11-207ENST00000558138 SPATA2Q9UM82 520 aa7.21□□□□□ -1.26
SPG11-207ENST00000558138 MMP24Q9Y5R2 645 aa7.21□□□□□ -1.26
SPG11-207ENST00000558138 TRIM64CA6NLI5 447 aa7.2□□□□□ -1.26
SPG11-207ENST00000558138 M0QZK8 103 aa7.2□□□□□ -1.26
SPG11-207ENST00000558138 RAB29O14966 203 aa7.2□□□□□ -1.26
SPG11-207ENST00000558138 TMEM127O75204 238 aa7.2□□□□□ -1.26
SPG11-207ENST00000558138 TSPAN9O75954 239 aa7.2□□□□□ -1.26
SPG11-207ENST00000558138 GSTP1P09211 210 aaKnown RBP7.2□□□□□ -1.26
SPG11-207ENST00000558138 GPR12P47775 334 aa7.2□□□□□ -1.26
SPG11-207ENST00000558138 RORCP51449 518 aa7.2□□□□□ -1.26
SPG11-207ENST00000558138 ZNF134P52741 427 aa7.2□□□□□ -1.26
SPG11-207ENST00000558138 ARPC4P59998 168 aa7.2□□□□□ -1.26
SPG11-207ENST00000558138 HABP2Q14520 560 aaPredicted RBP7.2□□□□□ -1.26
SPG11-207ENST00000558138 ABCA11PQ4W5N1 156 aa7.2□□□□□ -1.26
SPG11-207ENST00000558138 UBE2NLQ5JXB2 153 aa7.2□□□□□ -1.26
SPG11-207ENST00000558138 HACD4Q5VWC8 232 aa7.2□□□□□ -1.26
SPG11-207ENST00000558138 ZNF880Q6PDB4 577 aa7.2□□□□□ -1.26
SPG11-207ENST00000558138 C11orf88Q6PI97 169 aa7.2□□□□□ -1.26
SPG11-207ENST00000558138 CLVS1Q8IUQ0 354 aaPredicted RBP7.2□□□□□ -1.26
SPG11-207ENST00000558138 KLHDC1Q8N7A1 406 aa7.2□□□□□ -1.26
SPG11-207ENST00000558138 SAMD12Q8N8I0 201 aa7.2□□□□□ -1.26
SPG11-207ENST00000558138 NUDCD2Q8WVJ2 157 aa7.2□□□□□ -1.26
SPG11-207ENST00000558138 WFDC12Q8WWY7 111 aa7.2□□□□□ -1.26
SPG11-207ENST00000558138 AP3S1Q92572 193 aa7.2□□□□□ -1.26
SPG11-207ENST00000558138 S100A16Q96FQ6 103 aaKnown RBP7.2□□□□□ -1.26
SPG11-207ENST00000558138 IFT46Q9NQC8 304 aa7.2□□□□□ -1.26
SPG11-207ENST00000558138 PIPOXQ9P0Z9 390 aa7.2□□□□□ -1.26
SPG11-207ENST00000558138 COMMD3Q9UBI1 195 aa7.2□□□□□ -1.26
SPG11-207ENST00000558138 SAA2-SAA4A0A096LPE2 208 aa7.19□□□□□ -1.26
SPG11-207ENST00000558138 SMIM31A0A1B0GVY4 71 aa7.19□□□□□ -1.26
SPG11-207ENST00000558138 CCDC160A6NGH7 325 aa7.19□□□□□ -1.26
SPG11-207ENST00000558138 SH2D7A6NKC9 451 aaPredicted RBP7.19□□□□□ -1.26
SPG11-207ENST00000558138 FAM25AB3EWG3 89 aa7.19□□□□□ -1.26
SPG11-207ENST00000558138 FAM25CB3EWG5 89 aa7.19□□□□□ -1.26
SPG11-207ENST00000558138 FAM25GB3EWG6 89 aa7.19□□□□□ -1.26
SPG11-207ENST00000558138 H7C2Y5 167 aa7.19□□□□□ -1.26
SPG11-207ENST00000558138 J3QRK9 145 aa7.19□□□□□ -1.26
SPG11-207ENST00000558138 LANCL1O43813 399 aa7.19□□□□□ -1.26
SPG11-207ENST00000558138 MOSP00540 346 aa7.19□□□□□ -1.26
SPG11-207ENST00000558138 GSTT2P0CG29 244 aa7.19□□□□□ -1.26
SPG11-207ENST00000558138 GSTT2BP0CG30 244 aa7.19□□□□□ -1.26
SPG11-207ENST00000558138 SAA2P0DJI9 122 aaPredicted RBP7.19□□□□□ -1.26
SPG11-207ENST00000558138 DTYMKP23919 212 aa7.19□□□□□ -1.26
SPG11-207ENST00000558138 CD1BP29016 333 aa7.19□□□□□ -1.26
SPG11-207ENST00000558138 SOX6P35712 828 aa7.19□□□□□ -1.26
SPG11-207ENST00000558138 OR3A3P47888 321 aa7.19□□□□□ -1.26
SPG11-207ENST00000558138 BLCAPP62952 87 aa7.19□□□□□ -1.26
SPG11-207ENST00000558138 SRSF4Q08170 494 aaKnown RBP7.19□□□□□ -1.26
SPG11-207ENST00000558138 CBX3Q13185 183 aa7.19□□□□□ -1.26
SPG11-207ENST00000558138 PLGLAQ15195 96 aa7.19□□□□□ -1.26
SPG11-207ENST00000558138 PNLIPRP3Q17RR3 467 aa7.19□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms