RNA–Protein interactions for RNA: ENST00000558020.1

SNRPA1-204, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 3

Gene SNRPA1, Length 466 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-204ENST00000558020 OR52L2PQ8NGH6 319 aa10.65□□□□□ -0.7
SNRPA1-204ENST00000558020 KCNG3Q8TAE7 436 aa10.65□□□□□ -0.7
SNRPA1-204ENST00000558020 VCXQ9H320 206 aa10.65□□□□□ -0.7
SNRPA1-204ENST00000558020 GHITMQ9H3K2 345 aa10.65□□□□□ -0.7
SNRPA1-204ENST00000558020 NBR2O15453 112 aa10.64□□□□□ -0.71
SNRPA1-204ENST00000558020 OR8U8P0C7N1 319 aa10.64□□□□□ -0.71
SNRPA1-204ENST00000558020 MYF6P23409 242 aa10.64□□□□□ -0.71
SNRPA1-204ENST00000558020 PPP1CCP36873 323 aaKnown RBP10.64□□□□□ -0.71
SNRPA1-204ENST00000558020 ECI1P42126 302 aa10.64□□□□□ -0.71
SNRPA1-204ENST00000558020 ACSM3Q53FZ2 586 aa10.64□□□□□ -0.71
SNRPA1-204ENST00000558020 SIGIRRQ6IA17 410 aa10.64□□□□□ -0.71
SNRPA1-204ENST00000558020 LYPD6Q86Y78 171 aa10.64□□□□□ -0.71
SNRPA1-204ENST00000558020 OR11H1Q8NG94 326 aa10.64□□□□□ -0.71
SNRPA1-204ENST00000558020 OR1N2Q8NGR9 330 aa10.64□□□□□ -0.71
SNRPA1-204ENST00000558020 MRPL30Q8TCC3 161 aaKnown RBP10.64□□□□□ -0.71
SNRPA1-204ENST00000558020 PHYHIPQ92561 330 aa10.64□□□□□ -0.71
SNRPA1-204ENST00000558020 OR51J1Q9H342 316 aa10.64□□□□□ -0.71
SNRPA1-204ENST00000558020 PIPOXQ9P0Z9 390 aa10.64□□□□□ -0.71
SNRPA1-204ENST00000558020 VSIG4Q9Y279 399 aa10.64□□□□□ -0.71
SNRPA1-204ENST00000558020 TRAV41A0A0B4J266 112 aa10.63□□□□□ -0.71
SNRPA1-204ENST00000558020 RAB29O14966 203 aa10.63□□□□□ -0.71
SNRPA1-204ENST00000558020 HLA-DRB1P01911 266 aa10.63□□□□□ -0.71
SNRPA1-204ENST00000558020 MC5RP33032 325 aa10.63□□□□□ -0.71
SNRPA1-204ENST00000558020 RANBP1P43487 201 aa10.63□□□□□ -0.71
SNRPA1-204ENST00000558020 LUMP51884 338 aaPredicted RBP10.63□□□□□ -0.71
SNRPA1-204ENST00000558020 RCN1Q15293 331 aa10.63□□□□□ -0.71
SNRPA1-204ENST00000558020 ZNF260Q3ZCT1 412 aa10.63□□□□□ -0.71
SNRPA1-204ENST00000558020 FAM71F2Q6NXP2 309 aa10.63□□□□□ -0.71
SNRPA1-204ENST00000558020 ZNF833PQ6ZTB9 187 aa10.63□□□□□ -0.71
SNRPA1-204ENST00000558020 IL1F10Q8WWZ1 152 aa10.63□□□□□ -0.71
SNRPA1-204ENST00000558020 NABP2Q9BQ15 211 aa10.63□□□□□ -0.71
SNRPA1-204ENST00000558020 FAAP24Q9BTP7 215 aa10.63□□□□□ -0.71
SNRPA1-204ENST00000558020 MND1Q9BWT6 205 aa10.63□□□□□ -0.71
SNRPA1-204ENST00000558020 TMEM59Q9BXS4 323 aa10.63□□□□□ -0.71
SNRPA1-204ENST00000558020 RIMS4Q9H426 269 aaPredicted RBP10.63□□□□□ -0.71
SNRPA1-204ENST00000558020 CHMP1AQ9HD42 196 aaPredicted RBP10.63□□□□□ -0.71
SNRPA1-204ENST00000558020 PARP11Q9NR21 331 aa10.63□□□□□ -0.71
SNRPA1-204ENST00000558020 WSB1Q9Y6I7 421 aa10.63□□□□□ -0.71
SNRPA1-204ENST00000558020 GNAO1P09471 354 aa10.62□□□□□ -0.71
SNRPA1-204ENST00000558020 SRMP19623 302 aa10.62□□□□□ -0.71
SNRPA1-204ENST00000558020 CHATP28329 748 aa10.62□□□□□ -0.71
SNRPA1-204ENST00000558020 PPIFP30405 207 aaKnown RBP10.62□□□□□ -0.71
SNRPA1-204ENST00000558020 RPS27AP62979 156 aaKnown RBP10.62□□□□□ -0.71
SNRPA1-204ENST00000558020 RUNX1Q01196 453 aa10.62□□□□□ -0.71
SNRPA1-204ENST00000558020 GABPB1Q06547 395 aaPredicted RBP10.62□□□□□ -0.71
SNRPA1-204ENST00000558020 ZNF616Q08AN1 781 aa10.62□□□□□ -0.71
SNRPA1-204ENST00000558020 TMEM267Q0VDI3 215 aaPredicted RBP10.62□□□□□ -0.71
SNRPA1-204ENST00000558020 FHL3Q13643 280 aa10.62□□□□□ -0.71
SNRPA1-204ENST00000558020 GNMTQ14749 295 aa10.62□□□□□ -0.71
SNRPA1-204ENST00000558020 C5orf64Q2M2E5 130 aa10.62□□□□□ -0.71
SNRPA1-204ENST00000558020 C1orf100Q5SVJ3 147 aa10.62□□□□□ -0.71
SNRPA1-204ENST00000558020 RNLSQ5VYX0 342 aa10.62□□□□□ -0.71
SNRPA1-204ENST00000558020 ODF3L1Q8IXM7 274 aa10.62□□□□□ -0.71
SNRPA1-204ENST00000558020 ZNF491Q8N8L2 437 aa10.62□□□□□ -0.71
SNRPA1-204ENST00000558020 NPBQ8NG41 125 aa10.62□□□□□ -0.71
SNRPA1-204ENST00000558020 MRPL20Q9BYC9 149 aaKnown RBP10.62□□□□□ -0.71
SNRPA1-204ENST00000558020 ANKRD60Q9BZ19 345 aa10.62□□□□□ -0.71
SNRPA1-204ENST00000558020 PLEKHJ1Q9NW61 149 aa10.62□□□□□ -0.71
SNRPA1-204ENST00000558020 SCN3BQ9NY72 215 aa10.62□□□□□ -0.71
SNRPA1-204ENST00000558020 SCOCQ9UIL1 159 aa10.62□□□□□ -0.71
SNRPA1-204ENST00000558020 MGAT4AQ9UM21 535 aa10.62□□□□□ -0.71
SNRPA1-204ENST00000558020 U3KQK5 164 aa10.62□□□□□ -0.71
SNRPA1-204ENST00000558020 SAA2-SAA4A0A096LPE2 208 aa10.61□□□□□ -0.71
SNRPA1-204ENST00000558020 PTGES3LE9PB15 166 aa10.61□□□□□ -0.71
SNRPA1-204ENST00000558020 ATP6V0E1O15342 81 aa10.61□□□□□ -0.71
SNRPA1-204ENST00000558020 BPNT1O95861 308 aa10.61□□□□□ -0.71
SNRPA1-204ENST00000558020 IGLV1-40P01703 118 aa10.61□□□□□ -0.71
SNRPA1-204ENST00000558020 GSTP1P09211 210 aaKnown RBP10.61□□□□□ -0.71
SNRPA1-204ENST00000558020 SAA2P0DJI9 122 aaPredicted RBP10.61□□□□□ -0.71
SNRPA1-204ENST00000558020 VSIG8P0DPA2 414 aa10.61□□□□□ -0.71
SNRPA1-204ENST00000558020 HTR2CP28335 458 aa10.61□□□□□ -0.71
SNRPA1-204ENST00000558020 CD40LGP29965 261 aa10.61□□□□□ -0.71
SNRPA1-204ENST00000558020 BLVRBP30043 206 aaPredicted RBP10.61□□□□□ -0.71
SNRPA1-204ENST00000558020 OR3A3P47888 321 aa10.61□□□□□ -0.71
SNRPA1-204ENST00000558020 RAB9AP51151 201 aa10.61□□□□□ -0.71
SNRPA1-204ENST00000558020 PLGLAQ15195 96 aa10.61□□□□□ -0.71
SNRPA1-204ENST00000558020 SPHARQ15513 63 aa10.61□□□□□ -0.71
SNRPA1-204ENST00000558020 HMGN3Q15651 99 aa10.61□□□□□ -0.71
SNRPA1-204ENST00000558020 HSD17B12Q53GQ0 312 aa10.61□□□□□ -0.71
SNRPA1-204ENST00000558020 RBM48Q5RL73 367 aaKnown RBP10.61□□□□□ -0.71
SNRPA1-204ENST00000558020 C6orf141Q5SZD1 244 aa10.61□□□□□ -0.71
SNRPA1-204ENST00000558020 FAM27D1Q5T7N8 215 aa10.61□□□□□ -0.71
SNRPA1-204ENST00000558020 ZNF660Q6AZW8 331 aaPredicted RBP10.61□□□□□ -0.71
SNRPA1-204ENST00000558020 MOB1BQ7L9L4 216 aa10.61□□□□□ -0.71
SNRPA1-204ENST00000558020 C6orf201Q7Z4U5 140 aa10.61□□□□□ -0.71
SNRPA1-204ENST00000558020 CEACAM19Q7Z692 300 aa10.61□□□□□ -0.71
SNRPA1-204ENST00000558020 ZNF429Q86V71 674 aa10.61□□□□□ -0.71
SNRPA1-204ENST00000558020 TCTEX1D1Q8N7M0 179 aa10.61□□□□□ -0.71
SNRPA1-204ENST00000558020 SETD6Q8TBK2 473 aa10.61□□□□□ -0.71
SNRPA1-204ENST00000558020 MYOZ3Q8TDC0 251 aa10.61□□□□□ -0.71
SNRPA1-204ENST00000558020 FBLIM1Q8WUP2 373 aa10.61□□□□□ -0.71
SNRPA1-204ENST00000558020 SULT4A1Q9BR01 284 aa10.61□□□□□ -0.71
SNRPA1-204ENST00000558020 URM1Q9BTM9 101 aaKnown RBP10.61□□□□□ -0.71
SNRPA1-204ENST00000558020 TMED9Q9BVK6 235 aa10.61□□□□□ -0.71
SNRPA1-204ENST00000558020 KLK15Q9H2R5 256 aa10.61□□□□□ -0.71
SNRPA1-204ENST00000558020 SLC23A1Q9UHI7 598 aa10.61□□□□□ -0.71
SNRPA1-204ENST00000558020 RNF150Q9ULK6 438 aa10.61□□□□□ -0.71
SNRPA1-204ENST00000558020 ZNF256Q9Y2P7 627 aaPredicted RBP10.61□□□□□ -0.71
SNRPA1-204ENST00000558020 LSM4Q9Y4Z0 139 aaKnown RBP10.61□□□□□ -0.71
SNRPA1-204ENST00000558020 IGHV7-81A0A0B4J1V7 117 aa10.6□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 10.2 ms