RNA–Protein interactions for RNA: ENST00000557966.1

AC027088.1-201, humanhuman

TSL 2 BASIC

Gene AC027088.1, Length 1,117 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC027088.1-201ENST00000557966 CCDC90BQ9GZT6 254 aa12.75□□□□□ -0.37
AC027088.1-201ENST00000557966 ISYNA1Q9NPH2 558 aa12.75□□□□□ -0.37
AC027088.1-201ENST00000557966 AK6Q9Y3D8 172 aaKnown RBP12.75□□□□□ -0.37
AC027088.1-201ENST00000557966 FOXI3A8MTJ6 420 aaPredicted RBP12.74□□□□□ -0.37
AC027088.1-201ENST00000557966 AP4M1O00189 453 aa12.74□□□□□ -0.37
AC027088.1-201ENST00000557966 SOCS1O15524 211 aa12.74□□□□□ -0.37
AC027088.1-201ENST00000557966 YPEL1O60688 119 aa12.74□□□□□ -0.37
AC027088.1-201ENST00000557966 NAPSAO96009 420 aa12.74□□□□□ -0.37
AC027088.1-201ENST00000557966 CPEP16870 476 aa12.74□□□□□ -0.37
AC027088.1-201ENST00000557966 THBS3P49746 956 aa12.74□□□□□ -0.37
AC027088.1-201ENST00000557966 SLC35B1P78383 322 aa12.74□□□□□ -0.37
AC027088.1-201ENST00000557966 IZUMO2Q6UXV1 221 aa12.74□□□□□ -0.37
AC027088.1-201ENST00000557966 PRSS48Q7RTY5 328 aa12.74□□□□□ -0.37
AC027088.1-201ENST00000557966 MRPL41Q8IXM3 137 aaKnown RBP12.74□□□□□ -0.37
AC027088.1-201ENST00000557966 YPEL2Q96QA6 119 aa12.74□□□□□ -0.37
AC027088.1-201ENST00000557966 NABP2Q9BQ15 211 aa12.74□□□□□ -0.37
AC027088.1-201ENST00000557966 HDHD3Q9BSH5 251 aaPredicted RBP12.74□□□□□ -0.37
AC027088.1-201ENST00000557966 IFI27L2Q9H2X8 130 aa12.74□□□□□ -0.37
AC027088.1-201ENST00000557966 NOTCH3Q9UM47 2321 aa12.73□□□□□ -0.37
AC027088.1-201ENST00000557966 SAA2-SAA4A0A096LPE2 208 aa12.73□□□□□ -0.37
AC027088.1-201ENST00000557966 SLC17A2O00624 439 aa12.73□□□□□ -0.37
AC027088.1-201ENST00000557966 SAA2P0DJI9 122 aaPredicted RBP12.73□□□□□ -0.37
AC027088.1-201ENST00000557966 BLVRBP30043 206 aaPredicted RBP12.73□□□□□ -0.37
AC027088.1-201ENST00000557966 OR3A3P47888 321 aa12.73□□□□□ -0.37
AC027088.1-201ENST00000557966 FABP5Q01469 135 aa12.73□□□□□ -0.37
AC027088.1-201ENST00000557966 CFHR3Q02985 330 aa12.73□□□□□ -0.37
AC027088.1-201ENST00000557966 LY6G6FQ5SQ64 297 aa12.73□□□□□ -0.37
AC027088.1-201ENST00000557966 LCNL1Q6ZST4 164 aa12.73□□□□□ -0.37
AC027088.1-201ENST00000557966 ZNF833PQ6ZTB9 187 aa12.73□□□□□ -0.37
AC027088.1-201ENST00000557966 COMMD1Q8N668 190 aa12.73□□□□□ -0.37
AC027088.1-201ENST00000557966 KLHL30-AS1Q8NEE0 82 aa12.73□□□□□ -0.37
AC027088.1-201ENST00000557966 OR8H1Q8NGG4 311 aa12.73□□□□□ -0.37
AC027088.1-201ENST00000557966 GALMQ96C23 342 aa12.73□□□□□ -0.37
AC027088.1-201ENST00000557966 RCC1LQ96I51 464 aaKnown RBP12.73□□□□□ -0.37
AC027088.1-201ENST00000557966 RITA1Q96K30 269 aa12.73□□□□□ -0.37
AC027088.1-201ENST00000557966 MGLLQ99685 303 aa12.73□□□□□ -0.37
AC027088.1-201ENST00000557966 RASL11BQ9BPW5 248 aa12.73□□□□□ -0.37
AC027088.1-201ENST00000557966 PARP12Q9H0J9 701 aaKnown RBP12.73□□□□□ -0.37
AC027088.1-201ENST00000557966 PLGRKTQ9HBL7 147 aa12.73□□□□□ -0.37
AC027088.1-201ENST00000557966 ZFP57Q9NU63 452 aa12.73□□□□□ -0.37
AC027088.1-201ENST00000557966 AK3Q9UIJ7 227 aa12.73□□□□□ -0.37
AC027088.1-201ENST00000557966 NUDT19A8MXV4 375 aa12.72□□□□□ -0.37
AC027088.1-201ENST00000557966 ST8SIA5O15466 376 aa12.72□□□□□ -0.37
AC027088.1-201ENST00000557966 RPLP1P05386 114 aaKnown RBP12.72□□□□□ -0.37
AC027088.1-201ENST00000557966 SLC2A2P11168 524 aaPredicted RBP12.72□□□□□ -0.37
AC027088.1-201ENST00000557966 ARSBP15848 533 aa12.72□□□□□ -0.37
AC027088.1-201ENST00000557966 CNTFRP26992 372 aa12.72□□□□□ -0.37
AC027088.1-201ENST00000557966 CALRP27797 417 aaKnown RBP12.72□□□□□ -0.37
AC027088.1-201ENST00000557966 CLDN12P56749 244 aa12.72□□□□□ -0.37
AC027088.1-201ENST00000557966 KRTAP10-11P60412 298 aa12.72□□□□□ -0.37
AC027088.1-201ENST00000557966 MMDQ15546 238 aa12.72□□□□□ -0.37
AC027088.1-201ENST00000557966 TRAM1Q15629 374 aa12.72□□□□□ -0.37
AC027088.1-201ENST00000557966 FAM89BQ8N5H3 189 aa12.72□□□□□ -0.37
AC027088.1-201ENST00000557966 OR51D1Q8NGF3 324 aa12.72□□□□□ -0.37
AC027088.1-201ENST00000557966 SETD6Q8TBK2 473 aa12.72□□□□□ -0.37
AC027088.1-201ENST00000557966 IL1F10Q8WWZ1 152 aa12.72□□□□□ -0.37
AC027088.1-201ENST00000557966 CNBD2Q96M20 576 aa12.72□□□□□ -0.37
AC027088.1-201ENST00000557966 DUX3Q96PT4 197 aa12.72□□□□□ -0.37
AC027088.1-201ENST00000557966 CHMP1AQ9HD42 196 aaPredicted RBP12.72□□□□□ -0.37
AC027088.1-201ENST00000557966 PLEKHJ1Q9NW61 149 aa12.72□□□□□ -0.37
AC027088.1-201ENST00000557966 ARL6IP5O75915 188 aa12.71□□□□□ -0.37
AC027088.1-201ENST00000557966 RGS11O94810 467 aa12.71□□□□□ -0.37
AC027088.1-201ENST00000557966 PSMA1P25786 263 aaKnown RBP12.71□□□□□ -0.37
AC027088.1-201ENST00000557966 TMEM50BP56557 158 aa12.71□□□□□ -0.37
AC027088.1-201ENST00000557966 ACTBP60709 375 aa12.71□□□□□ -0.37
AC027088.1-201ENST00000557966 PLA2G7Q13093 441 aa12.71□□□□□ -0.37
AC027088.1-201ENST00000557966 TBCEQ15813 527 aaPredicted RBP12.71□□□□□ -0.37
AC027088.1-201ENST00000557966 RAB11BQ15907 218 aa12.71□□□□□ -0.37
AC027088.1-201ENST00000557966 SSX1Q16384 188 aa12.71□□□□□ -0.37
AC027088.1-201ENST00000557966 PNLIPRP3Q17RR3 467 aa12.71□□□□□ -0.37
AC027088.1-201ENST00000557966 TEX38Q6PEX7 206 aa12.71□□□□□ -0.37
AC027088.1-201ENST00000557966 OR2AK2Q8NG84 335 aa12.71□□□□□ -0.37
AC027088.1-201ENST00000557966 P2RX4Q99571 388 aa12.71□□□□□ -0.37
AC027088.1-201ENST00000557966 ZNF251Q9BRH9 671 aa12.71□□□□□ -0.37
AC027088.1-201ENST00000557966 URM1Q9BTM9 101 aaKnown RBP12.71□□□□□ -0.37
AC027088.1-201ENST00000557966 ABRACLQ9P1F3 81 aa12.71□□□□□ -0.37
AC027088.1-201ENST00000557966 TRBV6-6A0A0A6YYG2 114 aa12.7□□□□□ -0.38
AC027088.1-201ENST00000557966 SHISA3A0PJX4 238 aa12.7□□□□□ -0.38
AC027088.1-201ENST00000557966 K7EIL1 84 aa12.7□□□□□ -0.38
AC027088.1-201ENST00000557966 HOXD3P31249 432 aaPredicted RBP12.7□□□□□ -0.38
AC027088.1-201ENST00000557966 SOX6P35712 828 aa12.7□□□□□ -0.38
AC027088.1-201ENST00000557966 HLA-DRB3P79483 266 aa12.7□□□□□ -0.38
AC027088.1-201ENST00000557966 MOB1BQ7L9L4 216 aa12.7□□□□□ -0.38
AC027088.1-201ENST00000557966 ZNF695Q8IW36 515 aa12.7□□□□□ -0.38
AC027088.1-201ENST00000557966 RNF152Q8N8N0 203 aa12.7□□□□□ -0.38
AC027088.1-201ENST00000557966 VCX3BQ9H321 246 aa12.7□□□□□ -0.38
AC027088.1-201ENST00000557966 OR1A1Q9P1Q5 309 aa12.7□□□□□ -0.38
AC027088.1-201ENST00000557966 ZNF107Q9UII5 783 aaPredicted RBP12.7□□□□□ -0.38
AC027088.1-201ENST00000557966 LRRC42Q9Y546 428 aa12.7□□□□□ -0.38
AC027088.1-201ENST00000557966 LDLRAD4O15165 306 aa12.69□□□□□ -0.38
AC027088.1-201ENST00000557966 DUS4LO95620 317 aaKnown RBP12.69□□□□□ -0.38
AC027088.1-201ENST00000557966 IGF1P05019 195 aa12.69□□□□□ -0.38
AC027088.1-201ENST00000557966 SLC6A1P30531 599 aa12.69□□□□□ -0.38
AC027088.1-201ENST00000557966 MYCNOSP40205 109 aa12.69□□□□□ -0.38
AC027088.1-201ENST00000557966 VEGFCP49767 419 aa12.69□□□□□ -0.38
AC027088.1-201ENST00000557966 EGFEM1PQ0D2K5 195 aa12.69□□□□□ -0.38
AC027088.1-201ENST00000557966 FOXE3Q13461 319 aa12.69□□□□□ -0.38
AC027088.1-201ENST00000557966 DEFB136Q30KP8 78 aa12.69□□□□□ -0.38
AC027088.1-201ENST00000557966 RPL39P5Q59GN2 51 aa12.69□□□□□ -0.38
AC027088.1-201ENST00000557966 PLAC9Q5JTB6 97 aa12.69□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms