RNA–Protein interactions for RNA: ENST00000557713.5

SCFD1-224, Transcript of sec1 family domain containing 1, humanhuman

TSL 4

Gene SCFD1, Length 556 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-224ENST00000557713 ZNF429Q86V71 674 aa12.36□□□□□ -0.43
SCFD1-224ENST00000557713 SBSPONQ8IVN8 264 aa12.36□□□□□ -0.43
SCFD1-224ENST00000557713 PQLC1Q8N2U9 271 aa12.36□□□□□ -0.43
SCFD1-224ENST00000557713 ZFP41Q8N8Y5 198 aa12.36□□□□□ -0.43
SCFD1-224ENST00000557713 ZNF555Q8NEP9 628 aa12.36□□□□□ -0.43
SCFD1-224ENST00000557713 NPBQ8NG41 125 aa12.36□□□□□ -0.43
SCFD1-224ENST00000557713 MRPL30Q8TCC3 161 aaKnown RBP12.36□□□□□ -0.43
SCFD1-224ENST00000557713 TMEM80Q96HE8 168 aa12.36□□□□□ -0.43
SCFD1-224ENST00000557713 Q96M66 194 aa12.36□□□□□ -0.43
SCFD1-224ENST00000557713 OR14A2Q96R54 314 aa12.36□□□□□ -0.43
SCFD1-224ENST00000557713 ZNF251Q9BRH9 671 aa12.36□□□□□ -0.43
SCFD1-224ENST00000557713 MRPL20Q9BYC9 149 aaKnown RBP12.36□□□□□ -0.43
SCFD1-224ENST00000557713 PARP11Q9NR21 331 aa12.36□□□□□ -0.43
SCFD1-224ENST00000557713 KCNIP1Q9NZI2 227 aa12.36□□□□□ -0.43
SCFD1-224ENST00000557713 JPT1Q9UK76 154 aa12.36□□□□□ -0.43
SCFD1-224ENST00000557713 OVOL1O14753 267 aa12.35□□□□□ -0.43
SCFD1-224ENST00000557713 YPEL1O60688 119 aa12.35□□□□□ -0.43
SCFD1-224ENST00000557713 CRTAPO75718 401 aaPredicted RBP12.35□□□□□ -0.43
SCFD1-224ENST00000557713 MAS1P04201 325 aa12.35□□□□□ -0.43
SCFD1-224ENST00000557713 MYL12AP19105 171 aa12.35□□□□□ -0.43
SCFD1-224ENST00000557713 BLVRBP30043 206 aaPredicted RBP12.35□□□□□ -0.43
SCFD1-224ENST00000557713 C19orf54Q5BKX5 351 aa12.35□□□□□ -0.43
SCFD1-224ENST00000557713 FAM27D1Q5T7N8 215 aa12.35□□□□□ -0.43
SCFD1-224ENST00000557713 AWAT2Q6E213 333 aa12.35□□□□□ -0.43
SCFD1-224ENST00000557713 YPEL2Q96QA6 119 aa12.35□□□□□ -0.43
SCFD1-224ENST00000557713 CHCHD3Q9NX63 227 aaKnown RBP12.35□□□□□ -0.43
SCFD1-224ENST00000557713 SMPD3Q9NY59 655 aaPredicted RBP12.35□□□□□ -0.43
SCFD1-224ENST00000557713 NDUFA3O95167 84 aa12.34□□□□□ -0.43
SCFD1-224ENST00000557713 OR3A3P47888 321 aa12.34□□□□□ -0.43
SCFD1-224ENST00000557713 C6orf141Q5SZD1 244 aa12.34□□□□□ -0.43
SCFD1-224ENST00000557713 CASC10Q5T4H9 136 aa12.34□□□□□ -0.43
SCFD1-224ENST00000557713 MUC7Q8TAX7 377 aa12.34□□□□□ -0.43
SCFD1-224ENST00000557713 DLX4Q92988 240 aaPredicted RBP12.34□□□□□ -0.43
SCFD1-224ENST00000557713 ALX4Q9H161 411 aaPredicted RBP12.34□□□□□ -0.43
SCFD1-224ENST00000557713 TPSG1Q9NRR2 321 aa12.34□□□□□ -0.43
SCFD1-224ENST00000557713 LRRC42Q9Y546 428 aa12.34□□□□□ -0.43
SCFD1-224ENST00000557713 RYR2Q92736 4967 aa12.34□□□□□ -0.43
SCFD1-224ENST00000557713 SOX15O60248 233 aa12.33□□□□□ -0.44
SCFD1-224ENST00000557713 PDCD6O75340 191 aa12.33□□□□□ -0.44
SCFD1-224ENST00000557713 RGS11O94810 467 aa12.33□□□□□ -0.44
SCFD1-224ENST00000557713 CAPGP40121 348 aa12.33□□□□□ -0.44
SCFD1-224ENST00000557713 CRIP2P52943 208 aaPredicted RBP12.33□□□□□ -0.44
SCFD1-224ENST00000557713 DOC2BQ14184 412 aa12.33□□□□□ -0.44
SCFD1-224ENST00000557713 GGHQ92820 318 aa12.33□□□□□ -0.44
SCFD1-224ENST00000557713 RCHY1Q96PM5 261 aa12.33□□□□□ -0.44
SCFD1-224ENST00000557713 DERL3Q96Q80 235 aa12.33□□□□□ -0.44
SCFD1-224ENST00000557713 TOLLIPQ9H0E2 274 aa12.33□□□□□ -0.44
SCFD1-224ENST00000557713 ISYNA1Q9NPH2 558 aa12.33□□□□□ -0.44
SCFD1-224ENST00000557713 FBXO7Q9Y3I1 522 aa12.33□□□□□ -0.44
SCFD1-224ENST00000557713 SAA2-SAA4A0A096LPE2 208 aa12.32□□□□□ -0.44
SCFD1-224ENST00000557713 LINC01619G3V211 115 aa12.32□□□□□ -0.44
SCFD1-224ENST00000557713 SAP30O75446 220 aa12.32□□□□□ -0.44
SCFD1-224ENST00000557713 BAG2O95816 211 aa12.32□□□□□ -0.44
SCFD1-224ENST00000557713 SAA2P0DJI9 122 aaPredicted RBP12.32□□□□□ -0.44
SCFD1-224ENST00000557713 EGR2P11161 476 aaPredicted RBP12.32□□□□□ -0.44
SCFD1-224ENST00000557713 SPNP16150 400 aa12.32□□□□□ -0.44
SCFD1-224ENST00000557713 SLURP1P55000 103 aa12.32□□□□□ -0.44
SCFD1-224ENST00000557713 NDPQ00604 133 aa12.32□□□□□ -0.44
SCFD1-224ENST00000557713 MED21Q13503 144 aa12.32□□□□□ -0.44
SCFD1-224ENST00000557713 ZNF660Q6AZW8 331 aaPredicted RBP12.32□□□□□ -0.44
SCFD1-224ENST00000557713 GALMQ96C23 342 aa12.32□□□□□ -0.44
SCFD1-224ENST00000557713 UQCC2Q9BRT2 126 aa12.32□□□□□ -0.44
SCFD1-224ENST00000557713 CST11Q9H112 138 aa12.32□□□□□ -0.44
SCFD1-224ENST00000557713 KIAA1456Q9P272 454 aa12.32□□□□□ -0.44
SCFD1-224ENST00000557713 GHRLQ9UBU3 117 aa12.32□□□□□ -0.44
SCFD1-224ENST00000557713 ERGIC3Q9Y282 383 aa12.32□□□□□ -0.44
SCFD1-224ENST00000557713 NUBP2Q9Y5Y2 271 aa12.32□□□□□ -0.44
SCFD1-224ENST00000557713 CD1AP06126 327 aa12.31□□□□□ -0.44
SCFD1-224ENST00000557713 FRMD6-AS1P0C7T7 363 aa12.31□□□□□ -0.44
SCFD1-224ENST00000557713 TAS2R43P59537 309 aa12.31□□□□□ -0.44
SCFD1-224ENST00000557713 CX3CL1P78423 397 aa12.31□□□□□ -0.44
SCFD1-224ENST00000557713 ST3GAL4Q11206 333 aa12.31□□□□□ -0.44
SCFD1-224ENST00000557713 HMGN3Q15651 99 aa12.31□□□□□ -0.44
SCFD1-224ENST00000557713 LRRC36Q1X8D7 754 aa12.31□□□□□ -0.44
SCFD1-224ENST00000557713 FAM71F2Q6NXP2 309 aa12.31□□□□□ -0.44
SCFD1-224ENST00000557713 ACSM6Q6P461 480 aa12.31□□□□□ -0.44
SCFD1-224ENST00000557713 OVCH2Q7RTZ1 564 aa12.31□□□□□ -0.44
SCFD1-224ENST00000557713 OR2AK2Q8NG84 335 aa12.31□□□□□ -0.44
SCFD1-224ENST00000557713 FAM46BQ96A09 425 aa12.31□□□□□ -0.44
SCFD1-224ENST00000557713 SULT4A1Q9BR01 284 aa12.31□□□□□ -0.44
SCFD1-224ENST00000557713 IFI27L2Q9H2X8 130 aa12.31□□□□□ -0.44
SCFD1-224ENST00000557713 FBXL15Q9H469 300 aa12.31□□□□□ -0.44
SCFD1-224ENST00000557713 SACSQ9NZJ4 4579 aa12.31□□□□□ -0.44
SCFD1-224ENST00000557713 PNMA8CA0A1B0GUJ8 204 aa12.3□□□□□ -0.44
SCFD1-224ENST00000557713 A0A1W2PN81 502 aa12.3□□□□□ -0.44
SCFD1-224ENST00000557713 FCN1O00602 326 aa12.3□□□□□ -0.44
SCFD1-224ENST00000557713 RRHO14718 337 aa12.3□□□□□ -0.44
SCFD1-224ENST00000557713 LGALS1P09382 135 aaKnown RBP12.3□□□□□ -0.44
SCFD1-224ENST00000557713 CT45A6P0DMU7 189 aa12.3□□□□□ -0.44
SCFD1-224ENST00000557713 CT45A5P0DMU8 189 aa12.3□□□□□ -0.44
SCFD1-224ENST00000557713 CT45A7P0DMV0 189 aa12.3□□□□□ -0.44
SCFD1-224ENST00000557713 GP9P14770 177 aa12.3□□□□□ -0.44
SCFD1-224ENST00000557713 CHRNA7P36544 502 aa12.3□□□□□ -0.44
SCFD1-224ENST00000557713 ECSCRQ19T08 205 aa12.3□□□□□ -0.44
SCFD1-224ENST00000557713 CD200R1LQ6Q8B3 271 aa12.3□□□□□ -0.44
SCFD1-224ENST00000557713 FAM131AQ6UXB0 335 aa12.3□□□□□ -0.44
SCFD1-224ENST00000557713 TCTEX1D1Q8N7M0 179 aa12.3□□□□□ -0.44
SCFD1-224ENST00000557713 NKAIN3Q8N8D7 197 aa12.3□□□□□ -0.44
SCFD1-224ENST00000557713 CASTOR1Q8WTX7 329 aa12.3□□□□□ -0.44
SCFD1-224ENST00000557713 FAAP24Q9BTP7 215 aa12.3□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms