RNA–Protein interactions for RNA: ENST00000556867.1

TDP1-216, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 2

Gene TDP1, Length 748 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-216ENST00000556867 IL1F10Q8WWZ1 152 aa18.26■□□□□ 0.51
TDP1-216ENST00000556867 SERTAD4Q9NUC0 356 aa18.26■□□□□ 0.51
TDP1-216ENST00000556867 SERPINE3A8MV23 424 aa18.25■□□□□ 0.51
TDP1-216ENST00000556867 M0QZK8 103 aa18.25■□□□□ 0.51
TDP1-216ENST00000556867 AIREO43918 545 aa18.25■□□□□ 0.51
TDP1-216ENST00000556867 LPLP06858 475 aa18.25■□□□□ 0.51
TDP1-216ENST00000556867 CD3GP09693 182 aa18.25■□□□□ 0.51
TDP1-216ENST00000556867 SNRPBP14678 240 aaKnown RBP18.25■□□□□ 0.51
TDP1-216ENST00000556867 SCAND1P57086 179 aa18.25■□□□□ 0.51
TDP1-216ENST00000556867 MOB3BQ86TA1 216 aa18.25■□□□□ 0.51
TDP1-216ENST00000556867 KLHDC1Q8N7A1 406 aa18.25■□□□□ 0.51
TDP1-216ENST00000556867 LGALS14Q8TCE9 139 aa18.25■□□□□ 0.51
TDP1-216ENST00000556867 ATG5Q9H1Y0 275 aa18.25■□□□□ 0.51
TDP1-216ENST00000556867 LANCL1O43813 399 aa18.24■□□□□ 0.51
TDP1-216ENST00000556867 IGKV1D-33P01593 117 aa18.24■□□□□ 0.51
TDP1-216ENST00000556867 IGKV1-33P01594 117 aa18.24■□□□□ 0.51
TDP1-216ENST00000556867 GNB3P16520 340 aa18.24■□□□□ 0.51
TDP1-216ENST00000556867 MRPS15P82914 257 aaKnown RBP18.24■□□□□ 0.51
TDP1-216ENST00000556867 EBI3Q14213 229 aa18.24■□□□□ 0.51
TDP1-216ENST00000556867 PRR31Q5SQ13 230 aa18.24■□□□□ 0.51
TDP1-216ENST00000556867 Q6ZS46 218 aa18.24■□□□□ 0.51
TDP1-216ENST00000556867 TGIF2LXQ8IUE1 241 aa18.24■□□□□ 0.51
TDP1-216ENST00000556867 LYG1Q8N1E2 194 aa18.24■□□□□ 0.51
TDP1-216ENST00000556867 OR2AK2Q8NG84 335 aa18.24■□□□□ 0.51
TDP1-216ENST00000556867 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP18.24■□□□□ 0.51
TDP1-216ENST00000556867 MOB4Q9Y3A3 225 aa18.24■□□□□ 0.51
TDP1-216ENST00000556867 AMY1AP04745 511 aa18.23■□□□□ 0.51
TDP1-216ENST00000556867 AMY2AP04746 511 aa18.23■□□□□ 0.51
TDP1-216ENST00000556867 FCGR3AP08637 254 aa18.23■□□□□ 0.51
TDP1-216ENST00000556867 SMIM18P0DKX4 95 aa18.23■□□□□ 0.51
TDP1-216ENST00000556867 TMEM11P17152 192 aa18.23■□□□□ 0.51
TDP1-216ENST00000556867 HES1Q14469 280 aa18.23■□□□□ 0.51
TDP1-216ENST00000556867 ARL6IP1Q15041 203 aa18.23■□□□□ 0.51
TDP1-216ENST00000556867 ODF3L1Q8IXM7 274 aa18.23■□□□□ 0.51
TDP1-216ENST00000556867 ETV7Q9Y603 341 aa18.23■□□□□ 0.51
TDP1-216ENST00000556867 MGAM2Q2M2H8 2515 aa18.23■□□□□ 0.51
TDP1-216ENST00000556867 A0A075B6Q4 140 aa18.22■□□□□ 0.51
TDP1-216ENST00000556867 IGHV3-72A0A0B4J1Y9 119 aa18.22■□□□□ 0.51
TDP1-216ENST00000556867 TRDCB7Z8K6 153 aa18.22■□□□□ 0.51
TDP1-216ENST00000556867 ITGB1BP1O14713 200 aa18.22■□□□□ 0.51
TDP1-216ENST00000556867 TMEM127O75204 238 aa18.22■□□□□ 0.51
TDP1-216ENST00000556867 SCGNO76038 276 aa18.22■□□□□ 0.51
TDP1-216ENST00000556867 SCTP09683 121 aa18.22■□□□□ 0.51
TDP1-216ENST00000556867 CD1BP29016 333 aa18.22■□□□□ 0.51
TDP1-216ENST00000556867 HERPUD1Q15011 391 aa18.22■□□□□ 0.51
TDP1-216ENST00000556867 IFI27L2Q9H2X8 130 aa18.22■□□□□ 0.51
TDP1-216ENST00000556867 SLC23A1Q9UHI7 598 aa18.22■□□□□ 0.51
TDP1-216ENST00000556867 WNK1Q9H4A3 2382 aa18.22■□□□□ 0.51
TDP1-216ENST00000556867 ZBTB25P24278 435 aa18.21■□□□□ 0.51
TDP1-216ENST00000556867 TGFBR1P36897 503 aa18.21■□□□□ 0.51
TDP1-216ENST00000556867 VDAC2P45880 294 aaPredicted RBP18.21■□□□□ 0.51
TDP1-216ENST00000556867 ABCA11PQ4W5N1 156 aa18.21■□□□□ 0.51
TDP1-216ENST00000556867 ARSJQ5FYB0 599 aaPredicted RBP18.21■□□□□ 0.51
TDP1-216ENST00000556867 IDNKQ5T6J7 187 aa18.21■□□□□ 0.51
TDP1-216ENST00000556867 WNT10AQ9GZT5 417 aa18.21■□□□□ 0.51
TDP1-216ENST00000556867 RHBDL2Q9NX52 303 aa18.21■□□□□ 0.51
TDP1-216ENST00000556867 OR1A1Q9P1Q5 309 aa18.21■□□□□ 0.51
TDP1-216ENST00000556867 NBEAL1Q6ZS30 2694 aa18.2■□□□□ 0.5
TDP1-216ENST00000556867 PKD1L1Q8TDX9 2849 aa18.2■□□□□ 0.5
TDP1-216ENST00000556867 IGKV1-6A0A0C4DH72 117 aa18.2■□□□□ 0.5
TDP1-216ENST00000556867 FGF16O43320 207 aa18.2■□□□□ 0.5
TDP1-216ENST00000556867 VSIG10L2P0DP72 767 aa18.2■□□□□ 0.5
TDP1-216ENST00000556867 KIR2DS1Q14954 304 aa18.2■□□□□ 0.5
TDP1-216ENST00000556867 TMEM95Q3KNT9 176 aa18.2■□□□□ 0.5
TDP1-216ENST00000556867 ZNF833PQ6ZTB9 187 aa18.2■□□□□ 0.5
TDP1-216ENST00000556867 CROCCP3Q8IVE0 287 aa18.2■□□□□ 0.5
TDP1-216ENST00000556867 Q8N6K4 173 aa18.2■□□□□ 0.5
TDP1-216ENST00000556867 OR4A4PQ8NGN8 299 aa18.2■□□□□ 0.5
TDP1-216ENST00000556867 OR13F1Q8NGS4 319 aa18.2■□□□□ 0.5
TDP1-216ENST00000556867 OR2T10Q8NGZ9 312 aa18.2■□□□□ 0.5
TDP1-216ENST00000556867 WIPF2Q8TF74 440 aaPredicted RBP18.2■□□□□ 0.5
TDP1-216ENST00000556867 EAF1Q96JC9 268 aaPredicted RBP18.2■□□□□ 0.5
TDP1-216ENST00000556867 PARP12Q9H0J9 701 aaKnown RBP18.2■□□□□ 0.5
TDP1-216ENST00000556867 SAA2-SAA4A0A096LPE2 208 aa18.19■□□□□ 0.5
TDP1-216ENST00000556867 ST8SIA5O15466 376 aa18.19■□□□□ 0.5
TDP1-216ENST00000556867 FABP7O15540 132 aa18.19■□□□□ 0.5
TDP1-216ENST00000556867 HSPA12AO43301 675 aa18.19■□□□□ 0.5
TDP1-216ENST00000556867 SAA2P0DJI9 122 aaPredicted RBP18.19■□□□□ 0.5
TDP1-216ENST00000556867 LSM3P62310 102 aaKnown RBP18.19■□□□□ 0.5
TDP1-216ENST00000556867 LSAMPQ13449 338 aa18.19■□□□□ 0.5
TDP1-216ENST00000556867 ARFRP1Q13795 201 aa18.19■□□□□ 0.5
TDP1-216ENST00000556867 HNF4GQ14541 408 aa18.19■□□□□ 0.5
TDP1-216ENST00000556867 CDNFQ49AH0 187 aa18.19■□□□□ 0.5
TDP1-216ENST00000556867 TET2Q6N021 2002 aaPredicted RBP18.19■□□□□ 0.5
TDP1-216ENST00000556867 FAM71F2Q6NXP2 309 aa18.19■□□□□ 0.5
TDP1-216ENST00000556867 C5orf56Q8N8D9 126 aa18.19■□□□□ 0.5
TDP1-216ENST00000556867 OR5H6Q8NGV6 325 aa18.19■□□□□ 0.5
TDP1-216ENST00000556867 EDARADDQ8WWZ3 215 aa18.19■□□□□ 0.5
TDP1-216ENST00000556867 SLC25A38Q96DW6 304 aa18.19■□□□□ 0.5
TDP1-216ENST00000556867 CABLES2Q9BTV7 478 aa18.19■□□□□ 0.5
TDP1-216ENST00000556867 FUNDC2Q9BWH2 189 aa18.19■□□□□ 0.5
TDP1-216ENST00000556867 ZNF736B4DX44 427 aaPredicted RBP18.18■□□□□ 0.5
TDP1-216ENST00000556867 M0QZ24 198 aa18.18■□□□□ 0.5
TDP1-216ENST00000556867 DIRAS3O95661 229 aa18.18■□□□□ 0.5
TDP1-216ENST00000556867 MOSP00540 346 aa18.18■□□□□ 0.5
TDP1-216ENST00000556867 GSTP1P09211 210 aaKnown RBP18.18■□□□□ 0.5
TDP1-216ENST00000556867 CEACAM6P40199 344 aa18.18■□□□□ 0.5
TDP1-216ENST00000556867 SERPINB10P48595 397 aa18.18■□□□□ 0.5
TDP1-216ENST00000556867 SRSF7Q16629 238 aaKnown RBP eCLIP18.18■□□□□ 0.5
TDP1-216ENST00000556867 HACD4Q5VWC8 232 aa18.18■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms