RNA–Protein interactions for RNA: ENST00000556718.1

PRPF39-210, Transcript of pre-mRNA processing factor 39, humanhuman

TSL 3

Gene PRPF39, Length 499 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39-210ENST00000556718 MAGEA3P43357 314 aa2.83□□□□□ -1.96
PRPF39-210ENST00000556718 KCNJ3P48549 501 aa2.83□□□□□ -1.96
PRPF39-210ENST00000556718 EVX1P49640 407 aa2.83□□□□□ -1.96
PRPF39-210ENST00000556718 GNG10P50151 68 aa2.83□□□□□ -1.96
PRPF39-210ENST00000556718 RAB8AP61006 207 aa2.83□□□□□ -1.96
PRPF39-210ENST00000556718 CACNG7P62955 275 aa2.83□□□□□ -1.96
PRPF39-210ENST00000556718 FABP9Q0Z7S8 132 aa2.83□□□□□ -1.96
PRPF39-210ENST00000556718 ATP6AP1LQ52LC2 224 aa2.83□□□□□ -1.96
PRPF39-210ENST00000556718 AKIRIN2Q53H80 203 aa2.83□□□□□ -1.96
PRPF39-210ENST00000556718 SPIN4Q56A73 249 aa2.83□□□□□ -1.96
PRPF39-210ENST00000556718 SPICQ8N5J4 248 aa2.83□□□□□ -1.96
PRPF39-210ENST00000556718 ZNF433Q8N7K0 673 aaPredicted RBP2.83□□□□□ -1.96
PRPF39-210ENST00000556718 FAM86B1Q8N7N1 296 aa2.83□□□□□ -1.96
PRPF39-210ENST00000556718 OR10K1Q8NGX5 313 aa2.83□□□□□ -1.96
PRPF39-210ENST00000556718 OR6K2Q8NGY2 324 aa2.83□□□□□ -1.96
PRPF39-210ENST00000556718 OR5W2Q8NH69 310 aa2.83□□□□□ -1.96
PRPF39-210ENST00000556718 OR10A6Q8NH74 314 aa2.83□□□□□ -1.96
PRPF39-210ENST00000556718 C15orf40Q8WUR7 153 aa2.83□□□□□ -1.96
PRPF39-210ENST00000556718 ING5Q8WYH8 240 aa2.83□□□□□ -1.96
PRPF39-210ENST00000556718 SLC25A46Q96AG3 418 aa2.83□□□□□ -1.96
PRPF39-210ENST00000556718 OTUB2Q96DC9 234 aa2.83□□□□□ -1.96
PRPF39-210ENST00000556718 MRPS24Q96EL2 167 aaKnown RBP2.83□□□□□ -1.96
PRPF39-210ENST00000556718 L3HYPDHQ96EM0 354 aa2.83□□□□□ -1.96
PRPF39-210ENST00000556718 PYURFQ96I23 114 aa2.83□□□□□ -1.96
PRPF39-210ENST00000556718 CPB2Q96IY4 423 aa2.83□□□□□ -1.96
PRPF39-210ENST00000556718 MCEEQ96PE7 176 aa2.83□□□□□ -1.96
PRPF39-210ENST00000556718 PITX2Q99697 317 aa2.83□□□□□ -1.96
PRPF39-210ENST00000556718 NDFIP1Q9BT67 221 aa2.83□□□□□ -1.96
PRPF39-210ENST00000556718 TMED9Q9BVK6 235 aa2.83□□□□□ -1.96
PRPF39-210ENST00000556718 GGACTQ9BVM4 153 aa2.83□□□□□ -1.96
PRPF39-210ENST00000556718 HINT2Q9BX68 163 aa2.83□□□□□ -1.96
PRPF39-210ENST00000556718 MAP1LC3CQ9BXW4 147 aa2.83□□□□□ -1.96
PRPF39-210ENST00000556718 SLC17A9Q9BYT1 436 aa2.83□□□□□ -1.96
PRPF39-210ENST00000556718 ABCG5Q9H222 651 aa2.83□□□□□ -1.96
PRPF39-210ENST00000556718 OR51E2Q9H255 320 aa2.83□□□□□ -1.96
PRPF39-210ENST00000556718 SYT4Q9H2B2 425 aa2.83□□□□□ -1.96
PRPF39-210ENST00000556718 OR52A5Q9H2C5 316 aa2.83□□□□□ -1.96
PRPF39-210ENST00000556718 POMKQ9H5K3 350 aa2.83□□□□□ -1.96
PRPF39-210ENST00000556718 TUBA4BQ9H853 241 aa2.83□□□□□ -1.96
PRPF39-210ENST00000556718 ZDHHC4Q9NPG8 344 aa2.83□□□□□ -1.96
PRPF39-210ENST00000556718 ASCL3Q9NQ33 180 aa2.83□□□□□ -1.96
PRPF39-210ENST00000556718 TREX1Q9NSU2 369 aa2.83□□□□□ -1.96
PRPF39-210ENST00000556718 V9GYH0 126 aa2.83□□□□□ -1.96
PRPF39-210ENST00000556718 MYH3P11055 1940 aa2.83□□□□□ -1.96
PRPF39-210ENST00000556718 RREB1Q92766 1687 aa2.82□□□□□ -1.96
PRPF39-210ENST00000556718 ECM29Q5VYK3 1845 aa2.82□□□□□ -1.96
PRPF39-210ENST00000556718 IGLV4-69A0A075B6H9 119 aa2.82□□□□□ -1.96
PRPF39-210ENST00000556718 A0A0B4J2E0 115 aa2.82□□□□□ -1.96
PRPF39-210ENST00000556718 C9orf170A2RU37 121 aa2.82□□□□□ -1.96
PRPF39-210ENST00000556718 OR2AT4A6NND4 320 aa2.82□□□□□ -1.96
PRPF39-210ENST00000556718 SNRPGP15A8MWD9 76 aa2.82□□□□□ -1.96
PRPF39-210ENST00000556718 MCRIP1C9JLW8 97 aa2.82□□□□□ -1.96
PRPF39-210ENST00000556718 F8VP50 259 aa2.82□□□□□ -1.96
PRPF39-210ENST00000556718 SMLR1H3BR10 107 aa2.82□□□□□ -1.96
PRPF39-210ENST00000556718 M0R143 59 aa2.82□□□□□ -1.96
PRPF39-210ENST00000556718 UPK1AO00322 258 aa2.82□□□□□ -1.96
PRPF39-210ENST00000556718 CXCR6O00574 342 aa2.82□□□□□ -1.96
PRPF39-210ENST00000556718 TAAR5O14804 337 aa2.82□□□□□ -1.96
PRPF39-210ENST00000556718 CHST10O43529 356 aa2.82□□□□□ -1.96
PRPF39-210ENST00000556718 CREBL2O60519 120 aaPredicted RBP2.82□□□□□ -1.96
PRPF39-210ENST00000556718 CTNSO60931 367 aa2.82□□□□□ -1.96
PRPF39-210ENST00000556718 ENTPD6O75354 484 aa2.82□□□□□ -1.96
PRPF39-210ENST00000556718 MED6O75586 246 aa2.82□□□□□ -1.96
PRPF39-210ENST00000556718 CDRT1O95170 752 aa2.82□□□□□ -1.96
PRPF39-210ENST00000556718 MPC2O95563 127 aa2.82□□□□□ -1.96
PRPF39-210ENST00000556718 C1QAP02745 245 aa2.82□□□□□ -1.96
PRPF39-210ENST00000556718 TCRBP04435 133 aa2.82□□□□□ -1.96
PRPF39-210ENST00000556718 SLC35G6P0C7Q6 338 aa2.82□□□□□ -1.96
PRPF39-210ENST00000556718 C1GALT1C1LP0DN25 315 aa2.82□□□□□ -1.96
PRPF39-210ENST00000556718 PIPP12273 146 aaPredicted RBP2.82□□□□□ -1.96
PRPF39-210ENST00000556718 HIST1H1BP16401 226 aaKnown RBP2.82□□□□□ -1.96
PRPF39-210ENST00000556718 G0S2P27469 103 aa2.82□□□□□ -1.96
PRPF39-210ENST00000556718 GGT2P36268 569 aa2.82□□□□□ -1.96
PRPF39-210ENST00000556718 KIR3DL2P43630 455 aa2.82□□□□□ -1.96
PRPF39-210ENST00000556718 IDH3GP51553 393 aaPredicted RBP2.82□□□□□ -1.96
PRPF39-210ENST00000556718 UCNP55089 124 aa2.82□□□□□ -1.96
PRPF39-210ENST00000556718 TPI1P60174 286 aa2.82□□□□□ -1.96
PRPF39-210ENST00000556718 RPL23P62829 140 aaKnown RBP2.82□□□□□ -1.96
PRPF39-210ENST00000556718 DCDP81605 110 aaKnown RBP2.82□□□□□ -1.96
PRPF39-210ENST00000556718 REEP5Q00765 189 aa2.82□□□□□ -1.96
PRPF39-210ENST00000556718 TNFRSF9Q07011 255 aa2.82□□□□□ -1.96
PRPF39-210ENST00000556718 RHEBQ15382 184 aa2.82□□□□□ -1.96
PRPF39-210ENST00000556718 RSU1Q15404 277 aa2.82□□□□□ -1.96
PRPF39-210ENST00000556718 RBMY1FQ15415 496 aaKnown RBP2.82□□□□□ -1.96
PRPF39-210ENST00000556718 SNRNP35Q16560 246 aaKnown RBP2.82□□□□□ -1.96
PRPF39-210ENST00000556718 DEFB116Q30KQ4 102 aa2.82□□□□□ -1.96
PRPF39-210ENST00000556718 BCL2L15Q5TBC7 163 aa2.82□□□□□ -1.96
PRPF39-210ENST00000556718 HIST2H3AQ71DI3 136 aa2.82□□□□□ -1.96
PRPF39-210ENST00000556718 SSX6Q7RTT6 188 aa2.82□□□□□ -1.96
PRPF39-210ENST00000556718 DCXRQ7Z4W1 244 aa2.82□□□□□ -1.96
PRPF39-210ENST00000556718 FUNDC1Q8IVP5 155 aa2.82□□□□□ -1.96
PRPF39-210ENST00000556718 TOMM5Q8N4H5 51 aa2.82□□□□□ -1.96
PRPF39-210ENST00000556718 ATP6V1C2Q8NEY4 427 aa2.82□□□□□ -1.96
PRPF39-210ENST00000556718 OR6K3Q8NGY3 331 aa2.82□□□□□ -1.96
PRPF39-210ENST00000556718 OR51A7Q8NH64 312 aa2.82□□□□□ -1.96
PRPF39-210ENST00000556718 OR4C6Q8NH72 309 aa2.82□□□□□ -1.96
PRPF39-210ENST00000556718 OR1S1Q8NH92 325 aa2.82□□□□□ -1.96
PRPF39-210ENST00000556718 TMEM234Q8WY98 164 aa2.82□□□□□ -1.96
PRPF39-210ENST00000556718 C22orf15Q8WYQ4 148 aa2.82□□□□□ -1.96
PRPF39-210ENST00000556718 ARL11Q969Q4 196 aa2.82□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms