RNA–Protein interactions for RNA: ENST00000556689.5

SHMT2-223, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 3

Gene SHMT2, Length 768 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-223ENST00000556689 CSTBP04080 98 aaKnown RBP9.78□□□□□ -0.84
SHMT2-223ENST00000556689 PSMA1P25786 263 aaKnown RBP9.78□□□□□ -0.84
SHMT2-223ENST00000556689 ZNF134P52741 427 aa9.78□□□□□ -0.84
SHMT2-223ENST00000556689 SLURP1P55000 103 aa9.78□□□□□ -0.84
SHMT2-223ENST00000556689 MLLT11Q13015 90 aaPredicted RBP9.78□□□□□ -0.84
SHMT2-223ENST00000556689 SRSF7Q16629 238 aaKnown RBP eCLIP9.78□□□□□ -0.84
SHMT2-223ENST00000556689 TIMM50Q3ZCQ8 353 aa9.78□□□□□ -0.84
SHMT2-223ENST00000556689 CT45A1Q5HYN5 189 aa9.78□□□□□ -0.84
SHMT2-223ENST00000556689 NHLRC3Q5JS37 347 aa9.78□□□□□ -0.84
SHMT2-223ENST00000556689 ATAD3CQ5T2N8 411 aa9.78□□□□□ -0.84
SHMT2-223ENST00000556689 ZNF529Q6P280 563 aa9.78□□□□□ -0.84
SHMT2-223ENST00000556689 GPR141Q7Z602 305 aa9.78□□□□□ -0.84
SHMT2-223ENST00000556689 OR5AK2Q8NH90 309 aa9.78□□□□□ -0.84
SHMT2-223ENST00000556689 CT45A3Q8NHU0 189 aa9.78□□□□□ -0.84
SHMT2-223ENST00000556689 OR4C12Q96R67 309 aa9.78□□□□□ -0.84
SHMT2-223ENST00000556689 ALX4Q9H161 411 aaPredicted RBP9.78□□□□□ -0.84
SHMT2-223ENST00000556689 METTL9Q9H1A3 318 aa9.78□□□□□ -0.84
SHMT2-223ENST00000556689 RAB9BQ9NP90 201 aa9.78□□□□□ -0.84
SHMT2-223ENST00000556689 PARP11Q9NR21 331 aa9.78□□□□□ -0.84
SHMT2-223ENST00000556689 BABAM2Q9NXR7 383 aa9.78□□□□□ -0.84
SHMT2-223ENST00000556689 GNG12Q9UBI6 72 aa9.78□□□□□ -0.84
SHMT2-223ENST00000556689 IGHV7-81A0A0B4J1V7 117 aa9.77□□□□□ -0.85
SHMT2-223ENST00000556689 GEMIN2O14893 280 aaKnown RBP9.77□□□□□ -0.85
SHMT2-223ENST00000556689 SPINT2O43291 252 aa9.77□□□□□ -0.85
SHMT2-223ENST00000556689 LANCL1O43813 399 aa9.77□□□□□ -0.85
SHMT2-223ENST00000556689 CDRT1O95170 752 aa9.77□□□□□ -0.85
SHMT2-223ENST00000556689 OR8U9P0C7N5 309 aa9.77□□□□□ -0.85
SHMT2-223ENST00000556689 IGHV4-30-4P0DP06 118 aa9.77□□□□□ -0.85
SHMT2-223ENST00000556689 MAP2K4P45985 399 aa9.77□□□□□ -0.85
SHMT2-223ENST00000556689 RBM11P57052 281 aaKnown RBP9.77□□□□□ -0.85
SHMT2-223ENST00000556689 LSAMPQ13449 338 aa9.77□□□□□ -0.85
SHMT2-223ENST00000556689 IRF3Q14653 427 aa9.77□□□□□ -0.85
SHMT2-223ENST00000556689 TRAM1Q15629 374 aa9.77□□□□□ -0.85
SHMT2-223ENST00000556689 MPV17LQ2QL34 196 aa9.77□□□□□ -0.85
SHMT2-223ENST00000556689 OR2G6Q5TZ20 316 aa9.77□□□□□ -0.85
SHMT2-223ENST00000556689 UBE2UQ5VVX9 321 aa9.77□□□□□ -0.85
SHMT2-223ENST00000556689 STEAP3Q658P3 488 aa9.77□□□□□ -0.85
SHMT2-223ENST00000556689 LIN54Q6MZP7 749 aa9.77□□□□□ -0.85
SHMT2-223ENST00000556689 ZNF497Q6ZNH5 498 aa9.77□□□□□ -0.85
SHMT2-223ENST00000556689 LINC00596Q86U02 117 aa9.77□□□□□ -0.85
SHMT2-223ENST00000556689 Q8N1Y9 231 aa9.77□□□□□ -0.85
SHMT2-223ENST00000556689 MINDY2Q8NBR6 621 aa9.77□□□□□ -0.85
SHMT2-223ENST00000556689 ZNF439Q8NDP4 499 aa9.77□□□□□ -0.85
SHMT2-223ENST00000556689 OR10V1Q8NGI7 309 aa9.77□□□□□ -0.85
SHMT2-223ENST00000556689 OR51A2Q8NGJ7 313 aa9.77□□□□□ -0.85
SHMT2-223ENST00000556689 NEK7Q8TDX7 302 aa9.77□□□□□ -0.85
SHMT2-223ENST00000556689 TSEN15Q8WW01 171 aaKnown RBP9.77□□□□□ -0.85
SHMT2-223ENST00000556689 ARPC1AQ92747 370 aa9.77□□□□□ -0.85
SHMT2-223ENST00000556689 MGLLQ99685 303 aa9.77□□□□□ -0.85
SHMT2-223ENST00000556689 PDCD1LG2Q9BQ51 273 aa9.77□□□□□ -0.85
SHMT2-223ENST00000556689 ZNF251Q9BRH9 671 aa9.77□□□□□ -0.85
SHMT2-223ENST00000556689 TOLLIPQ9H0E2 274 aa9.77□□□□□ -0.85
SHMT2-223ENST00000556689 IL36GQ9NZH8 169 aa9.77□□□□□ -0.85
SHMT2-223ENST00000556689 TRAPPC2LQ9UL33 140 aa9.77□□□□□ -0.85
SHMT2-223ENST00000556689 MRPS28Q9Y2Q9 187 aaKnown RBP9.77□□□□□ -0.85
SHMT2-223ENST00000556689 CSMD3Q7Z407 3707 aa9.77□□□□□ -0.85
SHMT2-223ENST00000556689 A8MZ25 164 aa9.76□□□□□ -0.85
SHMT2-223ENST00000556689 C12orf77C9JDV5 145 aa9.76□□□□□ -0.85
SHMT2-223ENST00000556689 AIPO00170 330 aa9.76□□□□□ -0.85
SHMT2-223ENST00000556689 HLA-DRB1P01911 266 aa9.76□□□□□ -0.85
SHMT2-223ENST00000556689 SMIM18P0DKX4 95 aa9.76□□□□□ -0.85
SHMT2-223ENST00000556689 MAPK3P27361 379 aaPredicted RBP9.76□□□□□ -0.85
SHMT2-223ENST00000556689 RPL5P46777 297 aaKnown RBP9.76□□□□□ -0.85
SHMT2-223ENST00000556689 ACTBP60709 375 aa9.76□□□□□ -0.85
SHMT2-223ENST00000556689 TMEM30BQ3MIR4 351 aa9.76□□□□□ -0.85
SHMT2-223ENST00000556689 SYT6Q5T7P8 510 aaPredicted RBP9.76□□□□□ -0.85
SHMT2-223ENST00000556689 RPL22L1Q6P5R6 122 aaKnown RBP9.76□□□□□ -0.85
SHMT2-223ENST00000556689 LYPD6Q86Y78 171 aa9.76□□□□□ -0.85
SHMT2-223ENST00000556689 PRR18Q8N4B5 295 aa9.76□□□□□ -0.85
SHMT2-223ENST00000556689 FLYWCH2Q96CP2 140 aaKnown RBP9.76□□□□□ -0.85
SHMT2-223ENST00000556689 SMIM19Q96E16 107 aa9.76□□□□□ -0.85
SHMT2-223ENST00000556689 RITA1Q96K30 269 aa9.76□□□□□ -0.85
SHMT2-223ENST00000556689 S100A13Q99584 98 aa9.76□□□□□ -0.85
SHMT2-223ENST00000556689 ISG20L2Q9H9L3 353 aaKnown RBP9.76□□□□□ -0.85
SHMT2-223ENST00000556689 TPSG1Q9NRR2 321 aa9.76□□□□□ -0.85
SHMT2-223ENST00000556689 C19orf73Q9NVV2 129 aa9.76□□□□□ -0.85
SHMT2-223ENST00000556689 TAS2R4Q9NYW5 299 aa9.76□□□□□ -0.85
SHMT2-223ENST00000556689 CLEC2DQ9UHP7 191 aa9.76□□□□□ -0.85
SHMT2-223ENST00000556689 IGHV4OR15-8A0A075B7B6 117 aa9.75□□□□□ -0.85
SHMT2-223ENST00000556689 A0A087WW49 117 aa9.75□□□□□ -0.85
SHMT2-223ENST00000556689 A0A1W2PN81 502 aa9.75□□□□□ -0.85
SHMT2-223ENST00000556689 E9PI62 339 aa9.75□□□□□ -0.85
SHMT2-223ENST00000556689 HSPB1P04792 205 aaKnown RBP9.75□□□□□ -0.85
SHMT2-223ENST00000556689 CELP19835 753 aa9.75□□□□□ -0.85
SHMT2-223ENST00000556689 SERPINA2P20848 420 aa9.75□□□□□ -0.85
SHMT2-223ENST00000556689 CNTFRP26992 372 aa9.75□□□□□ -0.85
SHMT2-223ENST00000556689 CHRNA7P36544 502 aa9.75□□□□□ -0.85
SHMT2-223ENST00000556689 SOX2P48431 317 aa9.75□□□□□ -0.85
SHMT2-223ENST00000556689 PITPNAQ00169 270 aa9.75□□□□□ -0.85
SHMT2-223ENST00000556689 C5orf64Q2M2E5 130 aa9.75□□□□□ -0.85
SHMT2-223ENST00000556689 SGPP2Q8IWX5 399 aa9.75□□□□□ -0.85
SHMT2-223ENST00000556689 MUL1Q969V5 352 aa9.75□□□□□ -0.85
SHMT2-223ENST00000556689 ELOVL1Q9BW60 279 aa9.75□□□□□ -0.85
SHMT2-223ENST00000556689 LSM2Q9Y333 95 aaKnown RBP9.75□□□□□ -0.85
SHMT2-223ENST00000556689 PNMA8CA0A1B0GUJ8 204 aa9.74□□□□□ -0.85
SHMT2-223ENST00000556689 CCDC160A6NGH7 325 aa9.74□□□□□ -0.85
SHMT2-223ENST00000556689 MCRIP1C9JLW8 97 aa9.74□□□□□ -0.85
SHMT2-223ENST00000556689 ARPC1BO15143 372 aaKnown RBP9.74□□□□□ -0.85
SHMT2-223ENST00000556689 NBR2O15453 112 aa9.74□□□□□ -0.85
SHMT2-223ENST00000556689 HSPA12AO43301 675 aa9.74□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 49.2 ms